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PDB: 910 results

6FP7
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mTFP1/DARPin 1238_E11 complex in space group P6522
Descriptor: DARPin1238_E11, GFP-like fluorescent chromoprotein cFP484, GLYCEROL
Authors:Jakob, R.P, Vigano, M.A, Bieli, D, Matsuda, S, Schaefer, J.V, Pluckthun, A, Affolter, M, Maier, T.
Deposit date:2018-02-09
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.576 Å)
Cite:DARPins recognizing mTFP1 as novel reagents forin vitroandin vivoprotein manipulations.
Biol Open, 7, 2018
7TSU
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BU of 7tsu by Molmil
Room temperature rsEospa Cis-state structure at pH 5.5
Descriptor: Cis-state rsEospa
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2022-01-31
Release date:2022-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Observation of Cation Chromophore Photoisomerization of a Fluorescent Protein Using Millisecond Synchrotron Serial Crystallography and Infrared Vibrational and Visible Spectroscopy.
J.Phys.Chem.B, 126, 2022
7TSS
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Room temperature rsEospa Trans-state structure at pH 8.4
Descriptor: Trans-state rsEospa
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2022-01-31
Release date:2022-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Observation of Cation Chromophore Photoisomerization of a Fluorescent Protein Using Millisecond Synchrotron Serial Crystallography and Infrared Vibrational and Visible Spectroscopy.
J.Phys.Chem.B, 126, 2022
6FP8
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mTFP1/DARPin 1238_E11 complex in space group C2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DARPin1238_E11, ...
Authors:Jakob, R.P, Vigano, M.A, Bieli, D, Matsuda, S, Schaefer, J.V, Pluckthun, A, Affolter, M, Maier, T.
Deposit date:2018-02-09
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.855 Å)
Cite:DARPins recognizing mTFP1 as novel reagents forin vitroandin vivoprotein manipulations.
Biol Open, 7, 2018
7TSV
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BU of 7tsv by Molmil
Room temperature rsEospa Trans-state structure at pH 5.5
Descriptor: Trans-state rsEospa
Authors:Baxter, J.M, van Thor, J.J.
Deposit date:2022-01-31
Release date:2023-01-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Observation of Cation Chromophore Photoisomerization of a Fluorescent Protein Using Millisecond Synchrotron Serial Crystallography and Infrared Vibrational and Visible Spectroscopy.
J.Phys.Chem.B, 126, 2022
3WCK
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BU of 3wck by Molmil
Crystal structure of monomeric photosensitizing fluorescent protein, Supernova
Descriptor: Monomeric photosenitizing fluorescent protein supernova
Authors:Sakai, N, Matsuda, T, Takemoto, K, Nagai, T.
Deposit date:2013-05-27
Release date:2013-10-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation
Sci Rep, 3, 2013
3ZUJ
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BU of 3zuj by Molmil
Padron on (fluorescent) ABcis
Descriptor: FLUORESCENT PROTEIN DRONPA
Authors:REGIS Faro, A, Carpentier, P, Bourgeois, D.
Deposit date:2011-07-19
Release date:2011-08-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.345 Å)
Cite:Low-Temperature Chromophore Isomerization Reveals the Photoswitching Mechanism of the Fluorescent Protein Padron.
J.Am.Chem.Soc., 133, 2011
3ZTF
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BU of 3ztf by Molmil
X-ray Structure of the Cyan Fluorescent Protein mTurquoise2 (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-07-07
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
3ZUL
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BU of 3zul by Molmil
Padron on (fluorescent) Icis intermediate state
Descriptor: FLUORESCENT PROTEIN DRONPA
Authors:Faro, A.R, Carpentier, P, Bougeois, D.
Deposit date:2011-07-19
Release date:2011-11-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Low-Temperature Chromophore Isomerization Reveals the Photoswitching Mechanism of the Fluorescent Protein Padron.
J.Am.Chem.Soc., 133, 2011
3ZUF
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BU of 3zuf by Molmil
Padron off (non-fluorescent) Btrans
Descriptor: FLUORESCENT PROTEIN DRONPA
Authors:REGIS Faro, A, Carpentier, P, Bourgeois, D.
Deposit date:2011-07-18
Release date:2011-08-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Low-Temperature Chromophore Isomerization Reveals the Photoswitching Mechanism of the Fluorescent Protein Padron.
J.Am.Chem.Soc., 133, 2011
2Y0G
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BU of 2y0g by Molmil
X-ray structure of Enhanced Green Fluorescent Protein (EGFP)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Royant, A, Noirclerc-Savoye, M.
Deposit date:2010-12-02
Release date:2011-04-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Stabilizing Role of Glutamic Acid 222 in the Structure of Enhanced Green Fluorescent Protein.
J.Struct.Biol., 174, 2011
6GO9
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BU of 6go9 by Molmil
Structure of GFPmut2 crystallized at pH 6 and transferred to pH 7
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein
Authors:Lolli, G, Raboni, S, Pasqualetto, E, Campanini, B, Mozzarelli, A, Bettati, S, Battistutta, R.
Deposit date:2018-06-01
Release date:2018-12-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.672 Å)
Cite:Insight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography.
J.Phys.Chem.B, 122, 2018
6GO8
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BU of 6go8 by Molmil
Structure of GFPmut2 crystallized at pH 6
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein
Authors:Lolli, G, Raboni, S, Pasqualetto, E, Campanini, B, Mozzarelli, A, Bettati, S, Battistutta, R.
Deposit date:2018-06-01
Release date:2018-12-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Insight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography.
J.Phys.Chem.B, 122, 2018
7UGS
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BU of 7ugs by Molmil
Crystal structure of monomeric hyperfolder YFP (K206V mutant)
Descriptor: Hyperfolder yellow fluorescent protein
Authors:Campbell, B.C, Liu, C.F, Petsko, G.A.
Deposit date:2022-03-25
Release date:2022-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Chemically stable fluorescent proteins for advanced microscopy.
Nat.Methods, 19, 2022
7UGT
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BU of 7ugt by Molmil
Crystal structure of hyperfolder fluorescent protein FOLD6
Descriptor: FOLD6
Authors:Campbell, B.C, Liu, C.F, Petsko, G.A.
Deposit date:2022-03-25
Release date:2022-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Chemically stable fluorescent proteins for advanced microscopy.
Nat.Methods, 19, 2022
7UGR
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BU of 7ugr by Molmil
Crystal structure of hyperfolder YFP
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Hyperfolder yellow fluorescent protein, ...
Authors:Campbell, B.C, Liu, C.F, Petsko, G.A.
Deposit date:2022-03-25
Release date:2022-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Chemically stable fluorescent proteins for advanced microscopy.
Nat.Methods, 19, 2022
6FLL
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BU of 6fll by Molmil
SPECTROSCOPIC AND STRUCTURAL STUDY OF QW, A EGFP MUTANT SHOWING PHOTOSWITCHING PROPERTIES
Descriptor: Green fluorescent protein
Authors:Garau, G, Margheritis, E.
Deposit date:2018-01-26
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Role of Gln222 in Photoswitching of Aequorea Fluorescent Proteins: A Twisting and H-Bonding Affair?
Acs Chem.Biol., 13, 2018
6GRM
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BU of 6grm by Molmil
Structure of GFPmut2 crystallized at pH 6 and transferred to pH 9
Descriptor: Green fluorescent protein
Authors:Lolli, G, Raboni, S, Pasqualetto, E, Campanini, B, Mozzarelli, A, Bettati, S, Battistutta, R.
Deposit date:2018-06-11
Release date:2018-12-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insight into GFPmut2 pH Dependence by Single Crystal Microspectrophotometry and X-ray Crystallography.
J.Phys.Chem.B, 122, 2018
6GP0
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BU of 6gp0 by Molmil
Structure of mEos4b in the red fluorescent state
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6GP1
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BU of 6gp1 by Molmil
Structure of mEos4b in the red long-lived dark state
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6GOZ
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BU of 6goz by Molmil
Structure of mEos4b in the green long-lived dark state
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-11-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Mechanistic Investigations of Green mEos4b Reveal a Dynamic Long-Lived Dark State.
J.Am.Chem.Soc., 2020
3UFZ
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BU of 3ufz by Molmil
Crystal structure of a Trp-less green fluorescent protein translated by the universal genetic code
Descriptor: Green fluorescent protein
Authors:Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D.
Deposit date:2011-11-02
Release date:2012-10-17
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Simplification of the genetic code: restricted diversity of genetically encoded amino acids.
Nucleic Acids Res., 40, 2012
2YE0
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BU of 2ye0 by Molmil
X-ray structure of the cyan fluorescent protein mTurquoise (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-03-25
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
2YE1
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BU of 2ye1 by Molmil
X-ray structure of the cyan fluorescent proteinmTurquoise-GL (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
Authors:von Stetten, D, Noirclerc-Savoye, M, Goedhart, J, Gadella, T.W.J, Royant, A.
Deposit date:2011-03-25
Release date:2012-04-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural Characterization of the Cyan Fluorescent Protein Mturquoise-Gl
To be Published
6FWW
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GFP/KKK. A redesigned GFP with improved solubility
Descriptor: Green fluorescent protein
Authors:Varejao, N, Lascorz, J, Gil-Garcia, M, Diaz-Caballero, M, Navarro, S, Ventura, S, Reverter, D.
Deposit date:2018-03-07
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.131 Å)
Cite:Combining Structural Aggregation Propensity and Stability Predictions To Redesign Protein Solubility.
Mol. Pharm., 15, 2018

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