Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 324 results

7NYV
DownloadVisualize
BU of 7nyv by Molmil
Respiratory complex I from Escherichia coli - conformation 3
Descriptor: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Kolata, P, Efremov, R.G.
Deposit date:2021-03-23
Release date:2021-08-25
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation.
Elife, 10, 2021
7AWT
DownloadVisualize
BU of 7awt by Molmil
E. coli NADH quinone oxidoreductase hydrophilic arm
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Schimpf, J, Grishkovskaya, I, Haselbach, D, Friedrich, T.
Deposit date:2020-11-09
Release date:2021-09-15
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Structure of the peripheral arm of a minimalistic respiratory complex I.
Structure, 30, 2022
7O71
DownloadVisualize
BU of 7o71 by Molmil
Cryo-EM structure of a respiratory complex I
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Acyl carrier protein ACPM1 of NADH:Ubiquinone Oxidoreductase (Complex I), ...
Authors:Parey, K, Vonck, J.
Deposit date:2021-04-12
Release date:2021-11-10
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:High-resolution structure and dynamics of mitochondrial complex I-Insights into the proton pumping mechanism.
Sci Adv, 7, 2021
7O6Y
DownloadVisualize
BU of 7o6y by Molmil
Cryo-EM structure of respiratory complex I under turnover
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Parey, K, Vonck, J.
Deposit date:2021-04-12
Release date:2021-11-10
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:High-resolution structure and dynamics of mitochondrial complex I-Insights into the proton pumping mechanism.
Sci Adv, 7, 2021
7AQR
DownloadVisualize
BU of 7aqr by Molmil
Cryo-EM structure of Arabidopsis thaliana Complex-I (peripheral arm)
Descriptor: Acyl carrier protein 2, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Klusch, N, Kuehlbrandt, W, Yildiz, O.
Deposit date:2020-10-22
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:A ferredoxin bridge connects the two arms of plant mitochondrial complex I.
Plant Cell, 33, 2021
7ARB
DownloadVisualize
BU of 7arb by Molmil
Cryo-EM structure of Arabidopsis thaliana Complex-I (complete composition)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, ...
Authors:Klusch, N, Kuelbrandt, W, Yildiz, O.
Deposit date:2020-10-23
Release date:2021-12-15
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:A ferredoxin bridge connects the two arms of plant mitochondrial complex I.
Plant Cell, 33, 2021
7AR8
DownloadVisualize
BU of 7ar8 by Molmil
Cryo-EM structure of Arabidopsis thaliana complex-I (closed conformation)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, ...
Authors:Klusch, N, Kuelbrandt, W, Yildiz, O.
Deposit date:2020-10-23
Release date:2021-12-15
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:A ferredoxin bridge connects the two arms of plant mitochondrial complex I.
Plant Cell, 33, 2021
7AR7
DownloadVisualize
BU of 7ar7 by Molmil
Cryo-EM structure of Arabidopsis thaliana complex-I (open conformation)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, ...
Authors:Klusch, N, Kuelbrandt, W.
Deposit date:2020-10-23
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:A ferredoxin bridge connects the two arms of plant mitochondrial complex I.
Plant Cell, 33, 2021
3I9V
DownloadVisualize
BU of 3i9v by Molmil
Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, oxidized, 2 mol/ASU
Descriptor: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Sazanov, L.A, Berrisford, J.M.
Deposit date:2009-07-13
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for the mechanism of respiratory complex I
J.Biol.Chem., 284, 2009
1G8J
DownloadVisualize
BU of 1g8j by Molmil
CRYSTAL STRUCTURE ANALYSIS OF ARSENITE OXIDASE FROM ALCALIGENES FAECALIS
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, ARSENITE OXIDASE, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ellis, P.J, Conrads, T, Hille, R, Kuhn, P.
Deposit date:2000-11-17
Release date:2000-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of the 100 kDa arsenite oxidase from Alcaligenes faecalis in two crystal forms at 1.64 A and 2.03 A.
Structure, 9, 2001
3IAS
DownloadVisualize
BU of 3ias by Molmil
Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, oxidized, 4 mol/ASU, re-refined to 3.15 angstrom resolution
Descriptor: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Sazanov, L.A, Berrisford, J.M.
Deposit date:2009-07-14
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis for the mechanism of respiratory complex I
J.Biol.Chem., 284, 2009
3IAM
DownloadVisualize
BU of 3iam by Molmil
Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, reduced, 2 mol/ASU, with bound NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Sazanov, L.A, Berrisford, J.M.
Deposit date:2009-07-14
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for the mechanism of respiratory complex I
J.Biol.Chem., 284, 2009
1G8K
DownloadVisualize
BU of 1g8k by Molmil
CRYSTAL STRUCTURE ANALYSIS OF ARSENITE OXIDASE FROM ALCALIGENES FAECALIS
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, ARSENITE OXIDASE, ...
Authors:Ellis, P.J, Conrads, T, Hille, R, Kuhn, P.
Deposit date:2000-11-17
Release date:2000-12-13
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of the 100 kDa arsenite oxidase from Alcaligenes faecalis in two crystal forms at 1.64 A and 2.03 A.
Structure, 9, 2001
8E9I
DownloadVisualize
BU of 8e9i by Molmil
Mycobacterial respiratory complex I, semi-inserted quinone
Descriptor: (2R)-3-{[(R)-hydroxy({(1S,2R,3R,4R,5S,6S)-3,4,5-trihydroxy-2-(alpha-D-mannopyranosyloxy)-6-[(6-O-undecanoyl-beta-D-mannopyranosyl)oxy]cyclohexyl}oxy)phosphoryl]oxy}-2-(octanoyloxy)propyl undecanoate, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Liang, Y, Rubinstein, J.L.
Deposit date:2022-08-26
Release date:2022-10-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of mycobacterial respiratory complex I.
Proc.Natl.Acad.Sci.USA, 120, 2023
8E9H
DownloadVisualize
BU of 8e9h by Molmil
Mycobacterial respiratory complex I, fully-inserted quinone
Descriptor: (2R)-3-{[(R)-hydroxy({(1S,2R,3R,4R,5S,6S)-3,4,5-trihydroxy-2-(alpha-D-mannopyranosyloxy)-6-[(6-O-undecanoyl-beta-D-mannopyranosyl)oxy]cyclohexyl}oxy)phosphoryl]oxy}-2-(octanoyloxy)propyl undecanoate, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Liang, Y, Rubinstein, J.L.
Deposit date:2022-08-26
Release date:2022-10-12
Last modified:2023-04-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure of mycobacterial respiratory complex I.
Proc.Natl.Acad.Sci.USA, 120, 2023
8E9G
DownloadVisualize
BU of 8e9g by Molmil
Mycobacterial respiratory complex I with both quinone positions modelled
Descriptor: (2R)-3-{[(R)-hydroxy({(1S,2R,3R,4R,5S,6S)-3,4,5-trihydroxy-2-(alpha-D-mannopyranosyloxy)-6-[(6-O-undecanoyl-beta-D-mannopyranosyl)oxy]cyclohexyl}oxy)phosphoryl]oxy}-2-(octanoyloxy)propyl undecanoate, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Liang, Y, Rubinstein, J.L.
Deposit date:2022-08-26
Release date:2022-10-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structure of mycobacterial respiratory complex I.
Proc.Natl.Acad.Sci.USA, 120, 2023
8E73
DownloadVisualize
BU of 8e73 by Molmil
Vigna radiata supercomplex I+III2 (full bridge)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Maldonado, M, Letts, J.A.
Deposit date:2022-08-23
Release date:2023-01-11
Last modified:2023-02-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Plant-specific features of respiratory supercomplex I + III 2 from Vigna radiata.
Nat.Plants, 9, 2023
8ED4
DownloadVisualize
BU of 8ed4 by Molmil
Structure of the complex between the arsenite oxidase and its native electron acceptor cytochrome c552 from Pseudorhizobium sp. str. NT-26
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, AroA, AroB, ...
Authors:Maher, M.J, Poddar, N.
Deposit date:2022-09-03
Release date:2023-04-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structure of the complex between the arsenite oxidase from Pseudorhizobium banfieldiae sp. strain NT-26 and its native electron acceptor cytochrome c 552.
Acta Crystallogr D Struct Biol, 79, 2023
8ESW
DownloadVisualize
BU of 8esw by Molmil
Structure of mitochondrial complex I from Drosophila melanogaster, Flexible-class 1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Padavannil, A, Letts, J.A.
Deposit date:2022-10-15
Release date:2023-03-29
Last modified:2023-04-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state.
Elife, 12, 2023
8ESZ
DownloadVisualize
BU of 8esz by Molmil
Structure of mitochondrial complex I from Drosophila melanogaster, Helix-locked state
Descriptor: (2R)-3-{[(S)-hydroxy(3-methylbutoxy)phosphoryl]oxy}-2-(octanoyloxy)propyl decanoate, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Padavannil, A, Letts, J.A.
Deposit date:2022-10-15
Release date:2023-03-29
Last modified:2023-04-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state.
Elife, 12, 2023
6Q8X
DownloadVisualize
BU of 6q8x by Molmil
Respiratory complex I from Thermus thermophilus with bound Pyridaben.
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
Deposit date:2018-12-16
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.508 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6Q8W
DownloadVisualize
BU of 6q8w by Molmil
Respiratory complex I from Thermus thermophilus with bound Aureothin.
Descriptor: Aureothin, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
Deposit date:2018-12-16
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6Q8O
DownloadVisualize
BU of 6q8o by Molmil
Respiratory complex I from Thermus thermophilus with bound Piericidin A
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Gutierrez-Fernandez, J, Minhas, G.S, Sazanov, L.A.
Deposit date:2018-12-15
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.605 Å)
Cite:Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6RFQ
DownloadVisualize
BU of 6rfq by Molmil
Cryo-EM structure of a respiratory complex I assembly intermediate with NDUFAF2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Acyl carrier protein ACPM1 of NADH:Ubiquinone Oxidoreductase (Complex I), ...
Authors:Parey, K, Vonck, J.
Deposit date:2019-04-16
Release date:2019-12-11
Last modified:2021-06-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:High-resolution cryo-EM structures of respiratory complex I: Mechanism, assembly, and disease.
Sci Adv, 5, 2019
6RFR
DownloadVisualize
BU of 6rfr by Molmil
Cryo-EM structure of respiratory complex I from Yarrowia lipolytica at 3.2 A resolution
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Acyl carrier protein ACPM1 of NADH:Ubiquinone Oxidoreductase (Complex I), ...
Authors:Parey, K, Vonck, J.
Deposit date:2019-04-16
Release date:2019-12-11
Last modified:2021-06-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution cryo-EM structures of respiratory complex I: Mechanism, assembly, and disease.
Sci Adv, 5, 2019

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon