PDB Search results for query - Protein Data Bank Japan

PDB: 337 results

STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-09-26
Release date:	1995-01-26
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structural and functional effects of multiple mutations at distal sites in cytochrome c. Biochemistry, 34, 1995

1CO6

CRYSTAL STRUCTURE OF FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:	HEME C, PROTEIN (CYTOCHROME C2)
Authors:	Miki, K, Sogabe, S.
Deposit date:	1999-06-05
Release date:	1999-06-18
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Refined crystal structure of ferrocytochrome c2 from Rhodopseudomonas viridis at 1.6 A resolution. J.Mol.Biol., 252, 1995

1COR

INVESTIGATION OF THE SOLUTION CONFORMATION OF CYTOCHROME C-551 FROM PSEUDOMONAS STUTZERI
Descriptor:	CYTOCHROME C551, HEME C
Authors:	Cai, M, Bradford, E.G, Timkovich, R.
Deposit date:	1993-06-23
Release date:	1993-10-31
Last modified:	2021-03-10
Method:	SOLUTION NMR
Cite:	Investigation of the solution conformation of cytochrome c-551 from Pseudomonas stutzeri. Biochemistry, 31, 1992

1CRH

THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Berghuis, A.M, Brayer, G.D.
Deposit date:	1993-08-06
Release date:	1994-01-31
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c. J.Mol.Biol., 236, 1994

1ETP

CRYSTAL STRUCTURE OF CYTOCHROME C4 FROM PSEUDOMONAS STUTZERI
Descriptor:	CYTOCHROME C4, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Kadziola, A, Larsen, S.
Deposit date:	1996-01-23
Release date:	1997-02-12
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Crystal structure of the dihaem cytochrome c4 from Pseudomonas stutzeri determined at 2.2A resolution. Structure, 5, 1997

1DVV

SOLUTION STRUCTURE OF THE QUINTUPLE MUTANT OF CYTOCHROME C-551 FROM PSEUDOMONAS AERUGINOSA
Descriptor:	CYTOCHROME C551, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Hasegawa, J, Uchiyama, S, Tanimoto, Y, Mizutani, M, Kobayashi, Y, Sambongi, Y, Igarashi, Y.
Deposit date:	2000-01-22
Release date:	2000-11-29
Last modified:	2024-04-10
Method:	SOLUTION NMR
Cite:	Selected mutations in a mesophilic cytochrome c confer the stability of a thermophilic counterpart. J.Biol.Chem., 275, 2000

1CTZ

MUTATION OF TYROSINE-67 IN CYTOCHROME C SIGNIFICANTLY ALTERS THE LOCAL HEME ENVIRONMENT
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Berghuis, A.M, Brayer, G.D.
Deposit date:	1993-02-15
Release date:	1993-07-15
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Mutation of tyrosine-67 to phenylalanine in cytochrome c significantly alters the local heme environment. J.Mol.Biol., 235, 1994

1CHI

STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-06-01
Release date:	1994-12-20
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Structural studies of the roles of residues 82 and 85 at the interactive face of cytochrome c. Biochemistry, 34, 1995

1CSV

REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-10-04
Release date:	1995-01-26
Last modified:	2021-03-10
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Replacements in a conserved leucine cluster in the hydrophobic heme pocket of cytochrome c. Protein Sci., 4, 1995

1CSX

REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-10-04
Release date:	1995-01-26
Last modified:	2021-03-10
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Replacements in a conserved leucine cluster in the hydrophobic heme pocket of cytochrome c. Protein Sci., 4, 1995

1CSU

REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-10-04
Release date:	1995-01-26
Last modified:	2021-03-10
Method:	X-RAY DIFFRACTION (1.81 Å)
Cite:	Replacements in a conserved leucine cluster in the hydrophobic heme pocket of cytochrome c. Protein Sci., 4, 1995

1CSW

REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-10-04
Release date:	1995-01-26
Last modified:	2021-03-10
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Replacements in a conserved leucine cluster in the hydrophobic heme pocket of cytochrome c. Protein Sci., 4, 1995

1DVH

STRUCTURE AND DYNAMICS OF FERROCYTOCHROME C553 FROM DESULFOVIBRIO VULGARIS STUDIED BY NMR SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
Descriptor:	CYTOCHROME C553, HEME C
Authors:	Blackledge, M.J, Medvedeva, S, Poncin, M, Guerlesquin, F, Bruschi, M, Marion, D.
Deposit date:	1995-02-24
Release date:	1995-06-03
Last modified:	2021-03-03
Method:	SOLUTION NMR
Cite:	Structure and dynamics of ferrocytochrome c553 from Desulfovibrio vulgaris studied by NMR spectroscopy and restrained molecular dynamics. J.Mol.Biol., 245, 1995

1DT1

THERMUS THERMOPHILUS CYTOCHROME C552 SYNTHESIZED BY ESCHERICHIA COLI
Descriptor:	CYTOCHROME C552, HEME C
Authors:	Fee, J.A, Chen, Y, Hill, M.J, Gomez-Moran, E, Loehr, T, Ai, J, Thony-Meyer, L, Williams, P.A, Stura, E, Sridhar, V, McRee, D.E.
Deposit date:	2000-01-10
Release date:	2000-02-18
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Integrity of thermus thermophilus cytochrome c552 synthesized by Escherichia coli cells expressing the host-specific cytochrome c maturation genes, ccmABCDEFGH: biochemical, spectral, and structural characterization of the recombinant protein. Protein Sci., 9, 2000

1CIE

STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-09-26
Release date:	1995-01-26
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structural and functional effects of multiple mutations at distal sites in cytochrome c. Biochemistry, 34, 1995

1CRY

APPLICATION OF AN AUTOMATIC MOLECULAR REPLACEMENT PROCEDURE TO CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor:	CYTOCHROME C2, HEME C
Authors:	Miki, K, Sogabe, S.
Deposit date:	1993-12-27
Release date:	1994-04-30
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Application of an automatic molecular-replacement procedure to crystal structure analysis of cytochrome c2 from Rhodopseudomonas viridis. Acta Crystallogr.,Sect.D, 50, 1994

1CRI

THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor:	CYTOCHROME C, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:	Berghuis, A.M, Brayer, G.D.
Deposit date:	1993-08-06
Release date:	1994-01-31
Last modified:	2017-11-29
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c. J.Mol.Biol., 236, 1994

1CHJ

STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-06-01
Release date:	1994-12-20
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Structural studies of the roles of residues 82 and 85 at the interactive face of cytochrome c. Biochemistry, 34, 1995

1FHB

THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE CYANIDE ADDUCT OF A MET80ALA VARIANT OF SACCHAROMYCES CEREVISIAE ISO-1-CYTOCHROME C. IDENTIFICATION OF LIGAND-RESIDUE INTERACTIONS IN THE DISTAL HEME CAVITY
Descriptor:	CYANIDE ION, FERRICYTOCHROME C, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Banci, L, Bertini, I, Bren, K.L, Gray, H.B, Sompornpisut, P, Turano, P.
Deposit date:	1995-06-16
Release date:	1995-09-15
Last modified:	2022-02-23
Method:	SOLUTION NMR
Cite:	Three-Dimensional Solution Structure of the Cyanide Adduct of a met80Ala Variant of Saccharomyces Cerevisiae Iso-1-Cytochrome C. Identification of Ligand-Residue Interactions in the Distal Heme Cavity Biochemistry, 34, 1995

1FI7

Solution structure of the imidazole complex of cytochrome C
Descriptor:	CYTOCHROME C, HEME C, IMIDAZOLE
Authors:	Banci, L, Bertini, I, Liu, G, Lu, J, Reddig, T, Tang, W, Wu, Y, Zhu, D.
Deposit date:	2000-08-03
Release date:	2000-08-23
Last modified:	2022-02-23
Method:	SOLUTION NMR
Cite:	Effects of extrinsic imidazole ligation on the molecular and electronic structure of cytochrome c J.Biol.Inorg.Chem., 6, 2001

1FJ0

STRUCTURE DETERMINATION OF THE FERRICYTOCHROME C2 FROM RHODOPSEUDOMONAS PALUSTRIS
Descriptor:	CYTOCHROME C2, GLYCEROL, HEME C, ...
Authors:	Geremia, S.
Deposit date:	2000-08-07
Release date:	2002-01-16
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Cleavage of the iron-methionine bond in c-type cytochromes: Crystal structure of oxidized and reduced cytochrome c(2) from Rhodopseudomonas palustris and its ammonia complex. Protein Sci., 11, 2002

1CTY

MUTATION OF TYROSINE-67 IN CYTOCHROME C SIGNIFICANTLY ALTERS THE LOCAL HEME ENVIRONMENT
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Berghuis, A.M, Brayer, G.D.
Deposit date:	1993-02-15
Release date:	1993-07-15
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Mutation of tyrosine-67 to phenylalanine in cytochrome c significantly alters the local heme environment. J.Mol.Biol., 235, 1994

1CIH

STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, SULFATE ION
Authors:	Lo, T.P, Brayer, G.D.
Deposit date:	1994-09-26
Release date:	1995-01-26
Last modified:	2021-03-03
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Structural and functional effects of multiple mutations at distal sites in cytochrome c. Biochemistry, 34, 1995

1FI3

SOLUTION STRUCTURE OF THE M61H MUTANT OF PSEUDOMONAS STUTZERI SUBSTRAIN ZOBELL FERROCYTOCHROME C-551
Descriptor:	CYTOCHROME C-551, HEME C
Authors:	Miller, G.T, Hardman, J.K, Timkovich, R.
Deposit date:	2000-08-03
Release date:	2001-03-14
Last modified:	2021-11-03
Method:	SOLUTION NMR
Cite:	Solution conformation of the Met 61 to His 61 mutant of Pseudomonas stutzeri ZoBell ferrocytochrome c-551. Biophys.J., 80, 2001

1FI9

SOLUTION STRUCTURE OF THE IMIDAZOLE COMPLEX OF CYTOCHROME C
Descriptor:	CYTOCHROME C, HEME C, IMIDAZOLE
Authors:	Banci, L, Bertini, I, Liu, G, Lu, J, Reddig, T, Tang, W, Wu, Y, Zhu, D.
Deposit date:	2000-08-03
Release date:	2000-08-23
Last modified:	2022-02-23
Method:	SOLUTION NMR
Cite:	Effects of extrinsic imidazole ligation on the molecular and electronic structure of cytochrome c J.Biol.Inorg.Chem., 6, 2001

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Total results:	337
Displayed results:	25
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Other DB:	PFam PF00034