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PDB: 267 results

7F7X
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BU of 7f7x by Molmil
Protein complex between phosphorylated ubiquitin and Ubqln2 UBA
Descriptor: Polyubiquitin-B, Ubiquilin-2
Authors:Qin, L.Y, Dong, X, Tang, C.
Deposit date:2021-06-30
Release date:2022-05-18
Method:SOLUTION NMR
Cite:Kinetic Constraints in the Specific Interaction between Phosphorylated Ubiquitin and Proteasomal Shuttle Factors.
Biomolecules, 11, 2021
2MRO
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BU of 2mro by Molmil
Structure of the complex of ubiquitin and the UBA domain from DNA-damage-inducible 1 protein (Ddi1)
Descriptor: DNA damage-inducible protein 1, Polyubiquitin-B
Authors:Zhang, D, Fushman, D.
Deposit date:2014-07-14
Release date:2015-02-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2N13
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BU of 2n13 by Molmil
Complex structure of MyUb (1080-1122) of human Myosin VI with K63-diUb
Descriptor: Ubiquitin, Unconventional myosin-VI
Authors:He, F, Walters, K.
Deposit date:2015-03-20
Release date:2016-03-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Myosin VI Contains a Compact Structural Motif that Binds to Ubiquitin Chains.
Cell Rep, 14, 2016
2MSG
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BU of 2msg by Molmil
Solid-state NMR structure of ubiquitin
Descriptor: Ubiquitin
Authors:Lakomek, N, Habenstein, B, Loquet, A, Shi, C, Giller, K, Wolff, S, Becker, S, Fasshuber, H, Lange, A.
Deposit date:2014-08-04
Release date:2015-02-18
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Structural heterogeneity in microcrystalline ubiquitin studied by solid-state NMR.
Protein Sci., 24, 2015
6N13
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BU of 6n13 by Molmil
UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin
Descriptor: E3 ubiquitin-protein ligase parkin, Ubiquitin-conjugating enzyme E2 L3, ZINC ION, ...
Authors:Condos, T.E.C, Dunkerley, K.M, Freeman, E.A, Barber, K.R, Aguirre, J.D, Chaugule, V.K, Xiao, Y, Konermann, L, Walden, H, Shaw, G.S.
Deposit date:2018-11-08
Release date:2018-11-28
Last modified:2020-01-08
Method:SOLUTION NMR
Cite:Synergistic recruitment of UbcH7~Ub and phosphorylated Ubl domain triggers parkin activation.
EMBO J., 37, 2018
6QF8
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BU of 6qf8 by Molmil
Solution NMR ensemble for human ubiquitin at 298K compiled using the CoMAND method
Descriptor: Polyubiquitin-B
Authors:ElGamacy, M, Truffault, V, Zhu, H, Coles, M.
Deposit date:2019-01-09
Release date:2019-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mapping Local Conformational Landscapes of Proteins in Solution.
Structure, 27, 2019
2KHW
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BU of 2khw by Molmil
Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex
Descriptor: Immunoglobulin G-binding protein G, DNA polymerase iota, Ubiquitin
Authors:Bomar, M.G, D'Souza, S, Bienko, M, Dikic, I, Walker, G.
Deposit date:2009-04-13
Release date:2010-02-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex
To be Published
6K4I
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BU of 6k4i by Molmil
The partially disordered conformation of ubiquitin (Q41N variant)
Descriptor: ubiquitin
Authors:Wakamoto, T, Ikeya, T, Kitazawa, S, Baxter, N.J, Williamson, M.P, Kitahara, R.
Deposit date:2019-05-24
Release date:2019-10-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Paramagnetic relaxation enhancement-assisted structural characterization of a partially disordered conformation of ubiquitin.
Protein Sci., 28, 2019
5ZD0
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BU of 5zd0 by Molmil
Solution structure of human ubiquitin with three alanine mutations in living eukaryotic cells by in-cell NMR spectroscopy
Descriptor: ubiquitin
Authors:Tanaka, T, Ikeya, T, Kamoshida, H, Mishima, M, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2018-02-22
Release date:2019-08-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:High-Resolution Protein 3D Structure Determination in Living Eukaryotic Cells.
Angew.Chem.Int.Ed.Engl., 58, 2019
5UJL
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BU of 5ujl by Molmil
Representative 1-conformer ensembles of K27-linked Ub2 from RDC data
Descriptor: Ubiquitin
Authors:Castaneda, C.A, Fushman, D.
Deposit date:2017-01-18
Release date:2017-10-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Linkage via K27 Bestows Ubiquitin Chains with Unique Properties among Polyubiquitins.
Structure, 24, 2016
5UJN
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BU of 5ujn by Molmil
Representative 2-conformer ensembles of K27-linked Ub2 from RDC data
Descriptor: Ubiquitin
Authors:Castaneda, C.A, Fushman, D.
Deposit date:2017-01-18
Release date:2018-08-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Linkage via K27 Bestows Ubiquitin Chains with Unique Properties among Polyubiquitins.
Structure, 24, 2016
5VEY
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BU of 5vey by Molmil
Solution NMR structure of histone H2A-H2B mono-ubiquitylated at H2A Lys15 in complex with RNF169 (653-708)
Descriptor: E3 ubiquitin-protein ligase RNF169, Histone H2B type 1-J,Histone H2A type 1-B/E, Polyubiquitin-B
Authors:Hu, Q, Botuyan, M.V, Cui, G, Mer, G.
Deposit date:2017-04-06
Release date:2017-05-17
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment by RNF168/169 and RAD18.
Mol. Cell, 66, 2017
2KWU
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BU of 2kwu by Molmil
Solution Structure of UBM2 of murine Polymerase iota in Complex with Ubiquitin
Descriptor: DNA polymerase iota, Ubiquitin
Authors:Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G.
Deposit date:2010-04-19
Release date:2010-10-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin.
J.Biol.Chem., 286, 2011
2KWV
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BU of 2kwv by Molmil
Solution Structure of UBM1 of murine Polymerase iota in Complex with Ubiquitin
Descriptor: DNA polymerase iota, Ubiquitin
Authors:Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G.
Deposit date:2010-04-20
Release date:2010-10-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin.
J.Biol.Chem., 286, 2011
6KOX
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BU of 6kox by Molmil
Relaxed state of S65/T66 double-phosphorylated ubiquitin
Descriptor: Polyubiquitin-B
Authors:Dong, X, Tang, C.
Deposit date:2019-08-13
Release date:2019-08-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch.
Protein Cell, 10, 2019
2DEN
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BU of 2den by Molmil
Solution Structure of the Ubiquitin-Associated Domain of Human BMSC-UbP and its Complex with Ubiquitin
Descriptor: Immunoglobulin G-binding protein G,Ubiquitin-like protein 7, Polyubiquitin-B
Authors:Hu, H.Y, Lin, D.H, Chang, Y.G.
Deposit date:2006-02-14
Release date:2006-06-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the ubiquitin-associated domain of human BMSC-UbP and its complex with ubiquitin
Protein Sci., 15, 2006
5VZM
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BU of 5vzm by Molmil
Solution NMR structure of human Rev1 (932-1039) in complex with ubiquitin
Descriptor: DNA repair protein REV1, Ubiquitin
Authors:Cui, G, Botuyan, M.V, Mer, G.
Deposit date:2017-05-29
Release date:2018-05-23
Last modified:2019-12-04
Method:SOLUTION NMR
Cite:Structural Basis for the Interaction of Mutasome Assembly Factor REV1 with Ubiquitin.
J. Mol. Biol., 430, 2018

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