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PDB: 446 件
5ZHY
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BU of 5zhy by Molmil
Structural characterization of the HCoV-229E fusion core
分子名称: Spike glycoprotein
著者Zhang, W, Zheng, Q, Yan, M, Chen, X, Yang, H, Zhou, W, Rao, Z.
登録日2018-03-13
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.441 Å)
主引用文献Structural characterization of the HCoV-229E fusion core.
Biochem. Biophys. Res. Commun., 497, 2018
6AZ4
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BU of 6az4 by Molmil
RNA hairpin complex with guanosine dinucleotide ligand G(5')ppp(5')G
分子名称: DIGUANOSINE-5'-TRIPHOSPHATE, RNA (32-MER), RNA (5'-R(*CP*AP*GP*CP*AP*GP*CP*AP*G)-3')
著者Zhang, W, Szostak, J.W.
登録日2017-09-09
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Structural Rationale for the Enhanced Catalysis of Nonenzymatic RNA Primer Extension by a Downstream Oligonucleotide.
J. Am. Chem. Soc., 140, 2018
5ZHZ
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BU of 5zhz by Molmil
Crystal structure of the apurinic/apyrimidinic endonuclease IV from Mycobacterium tuberculosis
分子名称: Probable endonuclease 4, SULFATE ION, ZINC ION
著者Zhang, W, Xu, Y, Yan, M, Li, S, Wang, H, Yang, H, Zhou, W, Rao, Z.
登録日2018-03-13
公開日2018-04-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystal structure of the apurinic/apyrimidinic endonuclease IV from Mycobacterium tuberculosis.
Biochem. Biophys. Res. Commun., 498, 2018
6BMD
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BU of 6bmd by Molmil
RNA hairpin containing GpppG-oligo to mimic intermediate formed by activated monomer and activated downstream helper
分子名称: RNA (5'-D(*(GP3))-R(P*CP*AP*CP*CP*UP*CP*A)-3'), RNA (5'-R(P*GP*AP*GP*GP*UP*GP*(LCC)P*(LCC)P*GP*AP*GP*CP*GP*CP*GP*AP*AP*AP*GP*CP*GP*CP*UP*C)-3')
著者Zhang, W, Szostak, J.W.
登録日2017-11-14
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Rationale for the Enhanced Catalysis of Nonenzymatic RNA Primer Extension by a Downstream Oligonucleotide.
J. Am. Chem. Soc., 140, 2018
6C8D
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BU of 6c8d by Molmil
RNA-dGMP complex with Mg ion
分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
著者Zhang, W, Szostak, J.W.
登録日2018-01-24
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6C8K
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BU of 6c8k by Molmil
RNA-activated 2-AIpG monomer complex, 30 min soaking
分子名称: 2-amino-1-[(R)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-3-[(S)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
著者Zhang, W, Szostak, J.W.
登録日2018-01-24
公開日2018-05-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.259 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6C8O
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BU of 6c8o by Molmil
RNA-activated 2-AIpG monomer, 3h soaking
分子名称: 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]guanosine, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*G)-3')
著者Zhang, W, Szostak, J.W.
登録日2018-01-25
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6C8I
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BU of 6c8i by Molmil
RNA-activated 2-AIpG monomer complex, 5 min soaking
分子名称: 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]guanosine, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
著者Zhang, W, Szostak, J.W.
登録日2018-01-24
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6C8L
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BU of 6c8l by Molmil
RNA-activated 2-AIpG monomer complex, 1h soaking
分子名称: 2-amino-1-[(R)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-3-[(S)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
著者Zhang, W, Szostak, J.W.
登録日2018-01-25
公開日2018-05-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6C8M
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BU of 6c8m by Molmil
RNA-activated 2-AIpG monomer, 1.5h soaking
分子名称: 2-amino-1-[(R)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-3-[(S)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium, 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]guanosine, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3'), ...
著者Zhang, W, Szostak, J.W.
登録日2018-01-25
公開日2018-05-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6C8J
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BU of 6c8j by Molmil
RNA-activated 2-AIpG monomer complex, 15 min soaking
分子名称: 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]guanosine, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
著者Zhang, W, Szostak, J.W.
登録日2018-01-24
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6C8N
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BU of 6c8n by Molmil
RNA-activated 2-AIpG monomer complex, 2h soaking
分子名称: 2-amino-1-[(R)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-3-[(S)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium, 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]guanosine, MAGNESIUM ION, ...
著者Zhang, W, Szostak, J.W.
登録日2018-01-25
公開日2018-05-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6CAB
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BU of 6cab by Molmil
RNA-dGMP complex with Sr ion
分子名称: GUANOSINE-5'-MONOPHOSPHATE, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3'), STRONTIUM ION
著者Zhang, W, Szostak, J.W.
登録日2018-01-29
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6C8E
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BU of 6c8e by Molmil
RNA-imidazolium-bridged intermediate complex, 4h soaking
分子名称: 2-amino-1-[(R)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-3-[(S)-{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
著者Zhang, W, Szostak, J.W.
登録日2018-01-24
公開日2018-05-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic observation of nonenzymatic RNA primer extension.
Elife, 7, 2018
6GSA
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BU of 6gsa by Molmil
Core Centromere Binding Factor 3 (CBF3) with monomeric Ndc10
分子名称: Centromere DNA-binding protein complex CBF3 subunit A, Centromere DNA-binding protein complex CBF3 subunit B, Centromere DNA-binding protein complex CBF3 subunit C, ...
著者Zhang, W.J, Lukoynova, N, Vaughan, C.K.
登録日2018-06-13
公開日2018-08-01
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Insights into Centromere DNA Bending Revealed by the Cryo-EM Structure of the Core Centromere Binding Factor 3 with Ndc10.
Cell Rep, 24, 2018
4ACS
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BU of 4acs by Molmil
Crystal structure of mutant GST A2-2 with enhanced catalytic efficiency with azathioprine
分子名称: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE A2
著者Zhang, W, Moden, O, Tars, K, Mannervik, B.
登録日2011-12-19
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based redesign of GST A2-2 for enhanced catalytic efficiency with azathioprine.
Chem.Biol., 19, 2012
6KZI
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BU of 6kzi by Molmil
Crystal structure of Ser/Thr kinase Pim1 in complex with thioridazine derivatives
分子名称: 4-(2-chloro-10H-phenoxazin-10-yl)-N,N-diethylbutan-1-amine, Serine/threonine-protein kinase pim-1
著者Zhang, W, Wan, X, Li, W, Xie, Y, Huang, N.
登録日2019-09-24
公開日2020-03-04
最終更新日2021-03-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-Based Optimization of 10-DEBC Derivatives as Potent and Selective Pim-1 Kinase Inhibitors.
J.Chem.Inf.Model., 60, 2020
4DIX
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BU of 4dix by Molmil
Crystal structure of the Ig-PH domain of actin-binding protein SCAB1
分子名称: MALONATE ION, Plectin-related protein
著者Zhang, W, Ye, K.
登録日2012-02-01
公開日2012-02-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Plant actin-binding protein SCAB1 is dimeric actin cross-linker with atypical pleckstrin homology domain
J.Biol.Chem., 287, 2012
4DJG
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BU of 4djg by Molmil
Crystal structure of the coiled-coil 1 domain of actin-binding protein SCAB1
分子名称: Plectin-related protein
著者Zhang, W, Ye, K.
登録日2012-02-01
公開日2012-02-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Plant actin-binding protein SCAB1 is dimeric actin cross-linker with atypical pleckstrin homology domain
J.Biol.Chem., 287, 2012
4FP6
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BU of 4fp6 by Molmil
DNA octamer d(gtggccac) with 2'-se modification
分子名称: CHLORIDE ION, DNA (5'-D(*GP*(2ST)P*GP*GP*CP*CP*AP*C)-3')
著者Zhang, W, Sheng, J, Huang, Z.
登録日2012-06-21
公開日2012-08-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献DNA octamer d(gtggccac) with 2'-se modification
TO BE PUBLISHED
8SX6
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BU of 8sx6 by Molmil
RNA duplex bound with GMP and AMP monomers
分子名称: ADENOSINE MONOPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
著者Zhang, W, Dantsu, Y.
登録日2023-05-19
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SWG
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BU of 8swg by Molmil
RNA duplex bound with GpppA dinucleotide ligand
分子名称: GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3')
著者Zhang, W, Dantsu, Y.
登録日2023-05-18
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SX5
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BU of 8sx5 by Molmil
GpppA dinucleotide binding to RNA CU template
分子名称: GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3')
著者Zhang, W, Dantsu, Y.
登録日2023-05-19
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SXL
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BU of 8sxl by Molmil
RNA UU template binding to AMP monomer
分子名称: ADENOSINE MONOPHOSPHATE, RNA (5'-R(*(TLN)P*(TLN)P*(LCA)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*U)-3')
著者Zhang, W, Dantsu, Y.
登録日2023-05-22
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023
8SWO
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BU of 8swo by Molmil
GpppA dinucleotide ligand binding to RNA UC template
分子名称: GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G*(GA3))-3')
著者Zhang, W, Dantsu, Y.
登録日2023-05-19
公開日2023-05-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand.
Rsc Chem Biol, 4, 2023

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