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PDB: 45 件
4XY3
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BU of 4xy3 by Molmil
Structure of ESX-1 secreted protein EspB
分子名称: ESX-1 secretion-associated protein EspB
著者Wagner, J.M, Korotkov, K.V.
登録日2015-02-01
公開日2015-02-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis.
J.Struct.Biol., 191, 2015
1ZTU
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BU of 1ztu by Molmil
Structure of the chromophore binding domain of bacterial phytochrome
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Wagner, J.R, Brunzelle, J.S, Forest, K.T, Vierstra, R.D.
登録日2005-05-27
公開日2005-11-15
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome.
Nature, 438, 2005
5VA4
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BU of 5va4 by Molmil
TRIM-Cyclophilin A B-box 2 and coiled-coil chimera
分子名称: TRIM5/cyclophilin A V4 fusion protein, ZINC ION
著者Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.W.
登録日2017-03-24
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.306 Å)
主引用文献General Model for Retroviral Capsid Pattern Recognition by TRIM5 Proteins.
J. Virol., 92, 2018
5F7T
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BU of 5f7t by Molmil
TRIM5 B-box2 and coiled-coil chimera
分子名称: Tripartite motif-containing protein 5,Serine--tRNA ligase,Tripartite motif-containing protein 5, ZINC ION
著者Wagner, J.M, Doss, G, Pornillos, O.
登録日2015-12-08
公開日2016-06-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.292 Å)
主引用文献Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
5IEA
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BU of 5iea by Molmil
TRIM5 B-box2 and coiled-coil chimera
分子名称: Tripartite motif-containing protein 5, Serine--tRNA ligase Chimera, ZINC ION
著者Wagner, J.M, Doss, G, Pornillos, O.
登録日2016-02-25
公開日2016-06-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.258 Å)
主引用文献Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
2O9B
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BU of 2o9b by Molmil
Crystal Structure of Bacteriophytochrome chromophore binding domain
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
著者Wagner, J.R, Brunzelle, J.S, Vierstra, R.D, Forest, K.T.
登録日2006-12-13
公開日2007-03-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献High resolution structure of deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution.
J.Biol.Chem., 282, 2007
2O9C
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BU of 2o9c by Molmil
Crystal Structure of Bacteriophytochrome chromophore binding domain at 1.45 angstrom resolution
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
著者Wagner, J.R, Brunzelle, J.S, Vierstra, R.D, Forest, K.T.
登録日2006-12-13
公開日2007-03-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献High resolution structure of deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution.
J.Biol.Chem., 282, 2007
5EIU
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BU of 5eiu by Molmil
Mini TRIM5 B-box 2 dimer C2 crystal form
分子名称: TRIM protein-E3 ligase Chimera, ZINC ION
著者Wagner, J.M, Doss, G, Pornillos, O.
登録日2015-10-30
公開日2016-06-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.908 Å)
主引用文献Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
6BHT
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BU of 6bht by Molmil
HIV-1 CA hexamer in complex with IP6, orthorhombic crystal form
分子名称: Capsid protein p24, INOSITOL HEXAKISPHOSPHATE
著者Zadrozny, K, Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.
登録日2017-10-31
公開日2018-08-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.689 Å)
主引用文献Inositol phosphates are assembly co-factors for HIV-1.
Nature, 560, 2018
1YND
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BU of 1ynd by Molmil
Structure of human cyclophilin A in complex with the novel immunosuppressant sanglifehrin A at 1.6A resolution
分子名称: Peptidyl-prolyl cis-trans isomerase A, SANGLIFEHRIN A
著者Kallen, J, Sedrani, R, Zenke, G, Wagner, J.
登録日2005-01-24
公開日2005-04-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of human cyclophilin A in complex with the novel immunosuppressant sanglifehrin A at 1.6 A resolution.
J.Biol.Chem., 280, 2005
6BHR
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BU of 6bhr by Molmil
HIV-1 immature CTD-SP1 hexamer in complex with IP6
分子名称: Capsid protein p24,Spacer peptide 1, INOSITOL HEXAKISPHOSPHATE
著者Zadrozny, K, Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.
登録日2017-10-31
公開日2018-08-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.908 Å)
主引用文献Inositol phosphates are assembly co-factors for HIV-1.
Nature, 560, 2018
6BHS
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BU of 6bhs by Molmil
HIV-1 CA hexamer in complex with IP6, hexagonal crystal form
分子名称: Capsid protein p24, INOSITOL HEXAKISPHOSPHATE
著者Zadrozny, K, Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.
登録日2017-10-31
公開日2018-08-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.984 Å)
主引用文献Inositol phosphates are assembly co-factors for HIV-1.
Nature, 560, 2018
1NMK
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BU of 1nmk by Molmil
The Sanglifehrin-Cyclophilin Interaction: Degradation Work, Synthetic Macrocyclic Analogues, X-ray Crystal Structure and Binding Data
分子名称: (13E,15E)-(3S,6S,9R,10R,11S,12S,18S,21S)-10,12-DIHYDROXY-3-(3-HYDROXYBEN-ZYL)-18-((E)-3-HYDROXY-1-METHYLPROPENYL)-6-ISOPROPYL-11-METHYL-9-(3-OXO-BUTYL)-19-OXA-1,4,7,25-TETRAAZA-BICYCLO[19.3.1]PENTACOSA-13,15-DIENE-2,5,8,20-TETRAONE, Peptidyl-prolyl cis-trans isomerase A
著者Kallen, J, Sedrani, R, Wagner, J.
登録日2003-01-10
公開日2003-04-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Sanglifehrin-Cyclophilin Interaction: Degradation Work, Synthetic Macrocyclic Analogues, X-ray Crystal Structure and Binding Data
J.Am.Chem.Soc., 125, 2003
8PAY
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BU of 8pay by Molmil
Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 2.
分子名称: ACE-GLN-ALC-GLC-LEU-PHE, Beta sliding clamp, GLYCEROL, ...
著者Compain, G, Monsarrat, C, Blagojevic, J, Brillet, K, Dumas, P, Hammann, P, Kuhn, L, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Burnouf, D, wagner, J, Guichard, G.
登録日2023-06-08
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Peptide-Based Covalent Inhibitors Bearing Mild Electrophiles to Target a Conserved His Residue of the Bacterial Sliding Clamp.
Jacs Au, 4, 2024
7QV7
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BU of 7qv7 by Molmil
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
分子名称: Hydrogen dependent carbon dioxide reductase subunit FdhF, Hydrogen dependent carbon dioxide reductase subunit HycB3, Hydrogen dependent carbon dioxide reductase subunit HycB4, ...
著者Dietrich, H.M, Righetto, R.D, Kumar, A, Wietrzynski, W, Schuller, S.K, Trischler, R, Wagner, J, Schwarz, F.M, Engel, B.D, Mueller, V, Schuller, J.M.
登録日2022-01-19
公開日2022-07-06
最終更新日2022-08-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Membrane-anchored HDCR nanowires drive hydrogen-powered CO 2 fixation.
Nature, 607, 2022
3Q4J
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BU of 3q4j by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
分子名称: DNA polymerase III subunit beta, peptide ligand
著者Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
登録日2010-12-23
公開日2011-12-28
最終更新日2013-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3Q4K
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BU of 3q4k by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
分子名称: DNA polymerase III subunit beta, peptide ligand
著者Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
登録日2010-12-23
公開日2011-12-28
最終更新日2013-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3Q4L
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BU of 3q4l by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
分子名称: DNA polymerase III subunit beta, SODIUM ION, peptide ligand
著者Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
登録日2010-12-23
公開日2011-12-28
最終更新日2013-03-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
7AZD
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BU of 7azd by Molmil
DNA polymerase sliding clamp from Escherichia coli with peptide 20 bound
分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
著者Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y.
登録日2020-11-16
公開日2021-12-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp.
J.Med.Chem., 64, 2021
7AZF
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BU of 7azf by Molmil
DNA polymerase sliding clamp from Escherichia coli with peptide 8 bound
分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y.
登録日2020-11-16
公開日2021-12-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp.
J.Med.Chem., 64, 2021
7AZK
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BU of 7azk by Molmil
DNA polymerase sliding clamp from Escherichia coli with peptide 35 bound
分子名称: Beta sliding clamp, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y.
登録日2020-11-16
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp.
J.Med.Chem., 64, 2021
7AZC
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BU of 7azc by Molmil
DNA polymerase sliding clamp from Escherichia coli with peptide 22 bound
分子名称: Beta sliding clamp, GLYCEROL, Peptide 22
著者Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y.
登録日2020-11-16
公開日2021-12-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp.
J.Med.Chem., 64, 2021
7AZG
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BU of 7azg by Molmil
DNA polymerase sliding clamp from Escherichia coli with peptide 4 bound
分子名称: Beta sliding clamp, Peptide 4
著者Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y.
登録日2020-11-16
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp.
J.Med.Chem., 64, 2021
7AZ8
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BU of 7az8 by Molmil
DNA polymerase sliding clamp from Escherichia coli with peptide 43 bound
分子名称: Beta sliding clamp, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y.
登録日2020-11-16
公開日2021-12-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp.
J.Med.Chem., 64, 2021
7AZE
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BU of 7aze by Molmil
DNA polymerase sliding clamp from Escherichia coli with peptide 18 bound
分子名称: Beta sliding clamp, GLYCEROL, MALONATE ION, ...
著者Monsarrat, C, Compain, G, Andre, C, Martiel, I, Engilberge, S, Olieric, V, Wolff, P, Brillet, K, Landolfo, M, Silva da Veiga, C, Wagner, J, Guichard, G, Burnouf, D.Y.
登録日2020-11-16
公開日2021-12-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Iterative Structure-Based Optimization of Short Peptides Targeting the Bacterial Sliding Clamp.
J.Med.Chem., 64, 2021

 

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