Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 54 件

8QXS
DownloadVisualize
BU of 8qxs by Molmil
CryoEM structure of a GroEL14-GroES7 complex in presence of ADP-BeFx with wide GroEL7 trans ring conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ...
著者Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-10-25
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8QXT
DownloadVisualize
BU of 8qxt by Molmil
CryoEM structure of a GroEL14-GroES7 complex in presence of ADP-BeFx with narrow GroEL7 trans ring conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ...
著者Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-10-25
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8QXU
DownloadVisualize
BU of 8qxu by Molmil
In situ structure average of GroEL14-GroES7 complexes with wide GroEL7 trans ring conformation in Escherichia coli cytosol obtained by cryo electron tomography
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, ...
著者Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-10-25
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8QXV
DownloadVisualize
BU of 8qxv by Molmil
In situ structure average of GroEL14-GroES7 complexes with narrow GroEL7 trans ring conformation in Escherichia coli cytosol obtained by cryo electron tomography
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, ...
著者Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-10-25
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (13.6 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
5VA4
DownloadVisualize
BU of 5va4 by Molmil
TRIM-Cyclophilin A B-box 2 and coiled-coil chimera
分子名称: TRIM5/cyclophilin A V4 fusion protein, ZINC ION
著者Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.W.
登録日2017-03-24
公開日2017-11-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.306 Å)
主引用文献General Model for Retroviral Capsid Pattern Recognition by TRIM5 Proteins.
J. Virol., 92, 2018
5EIU
DownloadVisualize
BU of 5eiu by Molmil
Mini TRIM5 B-box 2 dimer C2 crystal form
分子名称: TRIM protein-E3 ligase Chimera, ZINC ION
著者Wagner, J.M, Doss, G, Pornillos, O.
登録日2015-10-30
公開日2016-06-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.908 Å)
主引用文献Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
5F7T
DownloadVisualize
BU of 5f7t by Molmil
TRIM5 B-box2 and coiled-coil chimera
分子名称: Tripartite motif-containing protein 5,Serine--tRNA ligase,Tripartite motif-containing protein 5, ZINC ION
著者Wagner, J.M, Doss, G, Pornillos, O.
登録日2015-12-08
公開日2016-06-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.292 Å)
主引用文献Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
5IEA
DownloadVisualize
BU of 5iea by Molmil
TRIM5 B-box2 and coiled-coil chimera
分子名称: Tripartite motif-containing protein 5, Serine--tRNA ligase Chimera, ZINC ION
著者Wagner, J.M, Doss, G, Pornillos, O.
登録日2016-02-25
公開日2016-06-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.258 Å)
主引用文献Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
1ZTU
DownloadVisualize
BU of 1ztu by Molmil
Structure of the chromophore binding domain of bacterial phytochrome
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Wagner, J.R, Brunzelle, J.S, Forest, K.T, Vierstra, R.D.
登録日2005-05-27
公開日2005-11-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome.
Nature, 438, 2005
4XY3
DownloadVisualize
BU of 4xy3 by Molmil
Structure of ESX-1 secreted protein EspB
分子名称: ESX-1 secretion-associated protein EspB
著者Wagner, J.M, Korotkov, K.V.
登録日2015-02-01
公開日2015-02-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis.
J.Struct.Biol., 191, 2015
8P4P
DownloadVisualize
BU of 8p4p by Molmil
Structure average of GroEL14 complexes found in the cytosol of Escherichia coli overexpressing GroEL obtained by cryo electron tomography
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, ...
著者Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (9.6 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8P4R
DownloadVisualize
BU of 8p4r by Molmil
In situ structure average of GroEL14-GroES14 complexes in Escherichia coli cytosol obtained by cryo electron tomography
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, Co-chaperonin GroES, ...
著者Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (11.9 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8P4O
DownloadVisualize
BU of 8p4o by Molmil
CryoEM structure of a GroEL7-GroES7 cage with encapsulated ordered substrate MetK in the presence of ADP-BeFx
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ...
著者Wagner, J, Beck, F, Bracher, A, Caravajal, A.I, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8P4N
DownloadVisualize
BU of 8p4n by Molmil
CryoEM structure of a GroEL7-GroES7 cage with encapsulated disordered substrate MetK in the presence of ADP-BeFx
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ...
著者Wagner, J, Beck, F, Bracher, A, Caravajal, A.I, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
8P4M
DownloadVisualize
BU of 8p4m by Molmil
CryoEM structure of a C7-symmetrical GroEL7-GroES7 cage in presence of ADP-BeFx
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ...
著者Wagner, J, Beck, F, Bracher, A, Caravajal, A.I, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U.
登録日2023-05-23
公開日2024-07-03
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Visualizing chaperonin function in situ by cryo-electron tomography.
Nature, 633, 2024
2O9B
DownloadVisualize
BU of 2o9b by Molmil
Crystal Structure of Bacteriophytochrome chromophore binding domain
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
著者Wagner, J.R, Brunzelle, J.S, Vierstra, R.D, Forest, K.T.
登録日2006-12-13
公開日2007-03-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献High resolution structure of deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution.
J.Biol.Chem., 282, 2007
2O9C
DownloadVisualize
BU of 2o9c by Molmil
Crystal Structure of Bacteriophytochrome chromophore binding domain at 1.45 angstrom resolution
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
著者Wagner, J.R, Brunzelle, J.S, Vierstra, R.D, Forest, K.T.
登録日2006-12-13
公開日2007-03-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献High resolution structure of deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution.
J.Biol.Chem., 282, 2007
1YND
DownloadVisualize
BU of 1ynd by Molmil
Structure of human cyclophilin A in complex with the novel immunosuppressant sanglifehrin A at 1.6A resolution
分子名称: Peptidyl-prolyl cis-trans isomerase A, SANGLIFEHRIN A
著者Kallen, J, Sedrani, R, Zenke, G, Wagner, J.
登録日2005-01-24
公開日2005-04-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of human cyclophilin A in complex with the novel immunosuppressant sanglifehrin A at 1.6 A resolution.
J.Biol.Chem., 280, 2005
1NMK
DownloadVisualize
BU of 1nmk by Molmil
The Sanglifehrin-Cyclophilin Interaction: Degradation Work, Synthetic Macrocyclic Analogues, X-ray Crystal Structure and Binding Data
分子名称: (13E,15E)-(3S,6S,9R,10R,11S,12S,18S,21S)-10,12-DIHYDROXY-3-(3-HYDROXYBEN-ZYL)-18-((E)-3-HYDROXY-1-METHYLPROPENYL)-6-ISOPROPYL-11-METHYL-9-(3-OXO-BUTYL)-19-OXA-1,4,7,25-TETRAAZA-BICYCLO[19.3.1]PENTACOSA-13,15-DIENE-2,5,8,20-TETRAONE, Peptidyl-prolyl cis-trans isomerase A
著者Kallen, J, Sedrani, R, Wagner, J.
登録日2003-01-10
公開日2003-04-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Sanglifehrin-Cyclophilin Interaction: Degradation Work, Synthetic Macrocyclic Analogues, X-ray Crystal Structure and Binding Data
J.Am.Chem.Soc., 125, 2003
5TUT
DownloadVisualize
BU of 5tut by Molmil
UbcH5a-Ub isopeptide conjugate
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 D1
著者Sanchez, J.G, Wagner, J.M, Pornillos, O.
登録日2016-11-07
公開日2017-11-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献UbcH5a-Ub isopeptide conjugate
To be Published
5TEO
DownloadVisualize
BU of 5teo by Molmil
Dimer of HIV-1 Gag CTD-SP1 fragment
分子名称: HIV-1 Gag CTD-SP1
著者Pornillos, O, Wagner, J.M, Zadrozny, K.K, Ganser-Pornillos, B.K.
登録日2016-09-22
公開日2017-09-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.046 Å)
主引用文献To be published
To Be Published
1XGW
DownloadVisualize
BU of 1xgw by Molmil
The crystal structure of human enthoprotin N-terminal domain
分子名称: Epsin 4
著者Lunin, V.V, Munger, C, Mazzoni, I, Wagner, J, Cygler, M.
登録日2004-09-17
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of human enthoprotin N-terminal domain
TO BE PUBLISHED
6BHR
DownloadVisualize
BU of 6bhr by Molmil
HIV-1 immature CTD-SP1 hexamer in complex with IP6
分子名称: Capsid protein p24,Spacer peptide 1, INOSITOL HEXAKISPHOSPHATE
著者Zadrozny, K, Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.
登録日2017-10-31
公開日2018-08-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.908 Å)
主引用文献Inositol phosphates are assembly co-factors for HIV-1.
Nature, 560, 2018
6BHT
DownloadVisualize
BU of 6bht by Molmil
HIV-1 CA hexamer in complex with IP6, orthorhombic crystal form
分子名称: Capsid protein p24, INOSITOL HEXAKISPHOSPHATE
著者Zadrozny, K, Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.
登録日2017-10-31
公開日2018-08-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.689 Å)
主引用文献Inositol phosphates are assembly co-factors for HIV-1.
Nature, 560, 2018
6BHS
DownloadVisualize
BU of 6bhs by Molmil
HIV-1 CA hexamer in complex with IP6, hexagonal crystal form
分子名称: Capsid protein p24, INOSITOL HEXAKISPHOSPHATE
著者Zadrozny, K, Wagner, J.M, Ganser-Pornillos, B.K, Pornillos, O.
登録日2017-10-31
公開日2018-08-01
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.984 Å)
主引用文献Inositol phosphates are assembly co-factors for HIV-1.
Nature, 560, 2018

 

123>

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon