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PDB: 214 results

6EPY
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BU of 6epy by Molmil
Structure of the PBP MelB (Atu4661) in complex with raffinose from A.fabrum C58
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Periplasmic alpha-galactoside-binding protein, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2017-10-12
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
J. Biol. Chem., 293, 2018
6ZAB
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BU of 6zab by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (P6422 space group)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Naretto, A, Vigouroux, A, Legrand, P.
Deposit date:2020-06-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZA7
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BU of 6za7 by Molmil
Structure of the apo transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6Z74
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BU of 6z74 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, V.
Deposit date:2020-05-29
Release date:2020-12-02
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
7ZHC
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BU of 7zhc by Molmil
Moss spermine/spermidine acetyl transferase (PpSSAT) in complex with AcetylCoA and polyethylen glycol
Descriptor: ACETYL COENZYME *A, GLYCEROL, N-acetyltransferase domain-containing protein, ...
Authors:Morera, S, Kopecny, D, Vigouroux, A.
Deposit date:2022-04-06
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.819 Å)
Cite:Biochemical and structural basis of polyamine, lysine and ornithine acetylation catalyzed by spermine/spermidine N-acetyl transferase in moss and maize.
Plant J., 114, 2023
7ZKT
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BU of 7zkt by Molmil
Moss spermine/spermidine acetyl transferase (PpSSAT) in complex with CoA and lysine
Descriptor: 1,2-ETHANEDIOL, COENZYME A, LYSINE, ...
Authors:Morera, S, Kopecny, D, Vigouroux, A, Briozzo, P.
Deposit date:2022-04-13
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Biochemical and structural basis of polyamine, lysine and ornithine acetylation catalyzed by spermine/spermidine N-acetyl transferase in moss and maize.
Plant J., 114, 2023
3N2S
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BU of 3n2s by Molmil
Structure of NfrA1 nitroreductase from B. subtilis
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, NADPH-dependent nitro/flavin reductase
Authors:Morera, S, Gueguen-Chaignon, V, Meyer, P, Cortial, S, Ouazzani, J.
Deposit date:2010-05-19
Release date:2010-09-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:NADH oxidase activity of Bacillus subtilis nitroreductase NfrA1: insight into its biological role.
Febs Lett., 584, 2010
7Z8E
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BU of 7z8e by Molmil
Crystal structure of the substrate-binding protein YejA from S. meliloti in complex with peptide fragment
Descriptor: 1,2-ETHANEDIOL, ABC transporter substrate-binding protein, GLY-SER-ASP-VAL-ALA, ...
Authors:Morera, S, Vigouroux, V, Travin, D.Y.
Deposit date:2022-03-17
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Dual-Uptake Mode of the Antibiotic Phazolicin Prevents Resistance Acquisition by Gram-Negative Bacteria.
Mbio, 14, 2023
5CFE
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BU of 5cfe by Molmil
Bacillus subtilis AP endonuclease ExoA
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Exodeoxyribonuclease
Authors:Morera, S, Vigouroux, A.
Deposit date:2015-07-08
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.
Biochimie, 128-129, 2016
5CFG
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BU of 5cfg by Molmil
C2 crystal form of APE1 with Mg2+
Descriptor: DNA-(apurinic or apyrimidinic site) lyase, MAGNESIUM ION
Authors:Morera, S, Vigouroux, A.
Deposit date:2015-07-08
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.
Biochimie, 128-129, 2016
6QAK
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BU of 6qak by Molmil
Structure of human ALDH9 in P21212 space group
Descriptor: 1,2-ETHANEDIOL, 4-trimethylaminobutyraldehyde dehydrogenase
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2018-12-19
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
6QAO
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BU of 6qao by Molmil
Structure of human aldehyde dehydrogenase 9A1 in P21 space group
Descriptor: 4-trimethylaminobutyraldehyde dehydrogenase, DI(HYDROXYETHYL)ETHER
Authors:Morera, S, Vigouroux, A.
Deposit date:2018-12-19
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
6QAP
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BU of 6qap by Molmil
Structure of the human aldehyde dehydrogenase 9A1 in C2 space group
Descriptor: 1,2-ETHANEDIOL, 4-trimethylaminobutyraldehyde dehydrogenase, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2018-12-19
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Kinetic and structural analysis of human ALDH9A1.
Biosci.Rep., 39, 2019
8OF3
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BU of 8of3 by Molmil
Structure of the apoform of ALDEHYDE DEHYDROGENASE 5F1 (ALDH5F1) from the moss Physcomitrium patens
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, PENTAETHYLENE GLYCOL, ...
Authors:Morera, S, Kopecny, D, Vigouroux, A.
Deposit date:2023-03-13
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.348 Å)
Cite:A study on abiotic stress responses of aldehyde dehydrogenase (ALDH) superfamilies in moss and barley focused on members linked to the GABA shunt pathway
To Be Published
8OFM
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BU of 8ofm by Molmil
Structure of the ALDEHYDE DEHYDROGENASE 5F1 (ALDH5F1) from the moss Physcomitrium patens in complex with NAD in an extended conformation
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Morera, S, Kopecny, D, Vigouroux, A.
Deposit date:2023-03-16
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.831 Å)
Cite:A study on abiotic stress responses of aldehyde dehydrogenase (ALDH) superfamilies in moss and barley focused on members linked to the GABA shunt pathway
To Be Published
8OF1
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BU of 8of1 by Molmil
Structure of ALDH5F1 from moss Physcomitrium patens in complex with NAD+ in the contracted conformation
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Kopecny, D, Vigouroux, A.
Deposit date:2023-03-13
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:A study on abiotic stress responses of aldehyde dehydrogenase (ALDH) superfamilies in moss and barley focused on members linked to the GABA shunt pathway
To Be Published
7R4U
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BU of 7r4u by Molmil
Apoform of FtrA/P19 from Rubrivivax gelatinosus
Descriptor: FtrA-P19, GLYCEROL, SODIUM ION, ...
Authors:Morera, S, Vigouroux, A, Plancqueel, S.
Deposit date:2022-02-09
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
7R3S
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BU of 7r3s by Molmil
FtrA/P19 of Rubrivivax gelatinosus in complex with Ni
Descriptor: FtrA-P19 protein, GLYCEROL, NICKEL (II) ION, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2022-02-07
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
7R5G
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BU of 7r5g by Molmil
FtrA-P19 from Rubrivivax gelatinosus in complex with copper and magnesium (X2)
Descriptor: COPPER (II) ION, DI(HYDROXYETHYL)ETHER, FtrA-P19, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2022-02-10
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
7R4Z
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BU of 7r4z by Molmil
Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with iron and copper
Descriptor: COPPER (I) ION, FE (III) ION, FtrA-P19 protein
Authors:Morera, S, Vigouroux, A.
Deposit date:2022-02-09
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
7R3P
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BU of 7r3p by Molmil
Apoform of the periplasmic FtrA/P19 protein from Rubrivivax gelatinosus (His-tag)
Descriptor: DI(HYDROXYETHYL)ETHER, FtrA-P19 protein, GLYCEROL, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2022-02-07
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
7R5E
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BU of 7r5e by Molmil
FtrA-P19 from Rubrivivax gelatinosus in complex with copper and magnesium (X1)
Descriptor: COPPER (II) ION, DI(HYDROXYETHYL)ETHER, FtrA-P19, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2022-02-10
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
7R4V
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BU of 7r4v by Molmil
Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with an endogenous CU1
Descriptor: COPPER (I) ION, FtrA-P19
Authors:Morera, S, Vigouroux, A.
Deposit date:2022-02-09
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022
6HLY
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BU of 6hly by Molmil
Structure in P212121 form of the PBP AgtB in complex with agropinic acid from A.tumefacien R10
Descriptor: 1,2-ETHANEDIOL, Agropine permease, agropinic acid
Authors:Morera, S, Marty, L, Vigouroux, A.
Deposit date:2018-09-11
Release date:2018-12-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis for two efficient modes of agropinic acid opine import into the bacterial pathogenAgrobacterium tumefaciens.
Biochem. J., 476, 2019
7R5P
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BU of 7r5p by Molmil
Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with copper and iron
Descriptor: 1,2-ETHANEDIOL, COPPER (I) ION, FtrA-P19 protein, ...
Authors:Morera, S, Vigouroux, A.
Deposit date:2022-02-11
Release date:2022-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens.
Febs J., 289, 2022

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PDB entries from 2024-11-06

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