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PDB: 304 件

6Y9A
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Structure of full-length CD20 in complex with Obinutuzumab Fab
分子名称: B-lymphocyte antigen CD20, Obinutuzumab Fab Light chain, Obinutuzumab Fab heavy chain
著者Kumar, A, Reyes, N.
登録日2020-03-06
公開日2020-08-26
最終更新日2020-09-16
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Binding mechanisms of therapeutic antibodies to human CD20.
Science, 369, 2020
6FC5
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Bik1 CAP-Gly domain
分子名称: Microtubule-associated protein
著者Kumar, A, Stangier, M.M, Steinmetz, M.O.
登録日2017-12-20
公開日2018-04-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structure-Function Relationship of the Bik1-Bim1 Complex.
Structure, 26, 2018
6Y97
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Structure of full-length CD20 in complex with Obinutuzumab Fab
分子名称: B-lymphocyte antigen CD20, Obinutuzumab Fab heavy chain, Obinutuzumab Fab light chain
著者Kumar, A, Reyes, N.
登録日2020-03-06
公開日2020-08-26
実験手法ELECTRON MICROSCOPY (4.33 Å)
主引用文献Binding mechanisms of therapeutic antibodies to human CD20.
Science, 369, 2020
6FC6
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BU of 6fc6 by Molmil
Bik1 CAP-Gly domain with ETF peptide from Bim1
分子名称: Nuclear fusion protein BIK1, Protein BIM1
著者Kumar, A, Stangier, M.M, Steinmetz, M.O.
登録日2017-12-20
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-Function Relationship of the Bik1-Bim1 Complex.
Structure, 26, 2018
3ND9
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BU of 3nd9 by Molmil
Structural characterization for the nucleotide binding ability of subunit A of the A1AO ATP synthase
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, V-type ATP synthase alpha chain
著者Kumar, A, Jeyakanthan, J, Gruber, G.
登録日2010-06-07
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The transition-like state and Pi entrance into the catalytic a subunit of the biological engine A-ATP synthase.
J.Mol.Biol., 408, 2011
8JCS
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BU of 8jcs by Molmil
Crystal structure of Procerain-B from Calotropis gigantea
分子名称: Procerain B
著者Kumar, A, Jamdar, S.N, Srivastava, G, Makde, R.D.
登録日2023-05-11
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of Procerain-B from Calotropis gigantea
To Be Published
8JCQ
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Crystal structure of Procerain from Calotropis gigantea
分子名称: BETA-MERCAPTOETHANOL, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, Procerain
著者Kumar, A, Jamdar, S.N, Srivastava, G, Makde, R.D.
登録日2023-05-11
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of Procerain from Calotropis gigantea
To Be Published
8JCR
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Crystal structure of Procerain from Calotropis gigantea (pH 6.0)
分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, ...
著者Kumar, A, Jamdar, S.N, Srivastava, G, Makde, R.D.
登録日2023-05-11
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of Procerain from Calotropis gigantea
To Be Published
8OH9
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Cryo-EM structure of the electron bifurcating transhydrogenase StnABC complex from Sporomusa Ovata (state 1)
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Formate dehydrogenase-O, ...
著者Kumar, A, Kremp, F, Mueller, V, Schuller, J.M.
登録日2023-03-20
公開日2023-09-13
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular architecture and electron transfer pathway of the Stn family transhydrogenase.
Nat Commun, 14, 2023
8OH5
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Cryo-EM structure of the electron bifurcating transhydrogenase StnABC complex from Sporomusa Ovata (state 2)
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Kumar, A, Kremp, F, Mueller, V, Schuller, J.M.
登録日2023-03-20
公開日2023-09-13
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular architecture and electron transfer pathway of the Stn family transhydrogenase.
Nat Commun, 14, 2023
7RBN
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Human DNA polymerase beta crosslinked complex, 20 min Ca to Mg exchange
分子名称: 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RBJ
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Human DNA polymerase beta crosslinked complex, 30 s Ca to Mg exchange
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RBI
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BU of 7rbi by Molmil
Human DNA polymerase beta crosslinked complex, 20 s Ca to Mg exchange
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RBO
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BU of 7rbo by Molmil
Human DNA polymerase beta crosslinked complex, 60 min Ca to Mg exchange
分子名称: 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RBH
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BU of 7rbh by Molmil
Human DNA polymerase beta crosslinked ternary complex 2
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, CALCIUM ION, ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RBL
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BU of 7rbl by Molmil
Human DNA polymerase beta crosslinked complex, 60 s Ca to Mg exchange
分子名称: 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), DNA (5'-D(*GP*TP*CP*GP*G)-3'), ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RBM
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BU of 7rbm by Molmil
Human DNA polymerase beta crosslinked complex, 60 s Ca to Mn exchange
分子名称: 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
7RBK
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BU of 7rbk by Molmil
Human DNA polymerase beta crosslinked complex, 40 s Ca to Mg exchange
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 2-deoxy-3,5-di-O-phosphono-D-erythro-pentitol, DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), ...
著者Kumar, A.
登録日2021-07-06
公開日2022-03-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Interlocking activities of DNA polymerase beta in the base excision repair pathway.
Proc.Natl.Acad.Sci.USA, 119, 2022
5ID2
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BU of 5id2 by Molmil
Asymmetry in the active site of Mycobacterium tuberculosis AhpE upon exposure to Mycothiol
分子名称: ACETATE ION, GLYCEROL, Putative peroxiredoxin Rv2238c
著者Kumar, A, Balakrishna, A.M, Gruber, G.
登録日2016-02-23
公開日2016-08-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Redox chemistry of Mycobacterium tuberculosis alkylhydroperoxide reductase E (AhpE): Structural and mechanistic insight into a mycoredoxin-1 independent reductive pathway of AhpE via mycothiol
Free Radic. Biol. Med., 97, 2016
7F8R
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BU of 7f8r by Molmil
Crystal structure of human soluble CLIC1 with catalytic cysteine (Cys24) in sulphonic acid form.
分子名称: Chloride intracellular channel protein 1
著者Kumar, A, Das, B.K, Sreeshma, N.S, Arockiasamy, A.
登録日2021-07-02
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Comparative kinetic analysis of ascorbate (Vitamin-C) recycling dehydroascorbate reductases from plants and humans.
Biochem.Biophys.Res.Commun., 591, 2021
5EVO
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BU of 5evo by Molmil
Structure of Dehydroascrobate Reductase from Pennisetum Americanum in complex with two non-native ligands, Acetate in the G-site and Glycerol in the H-site
分子名称: ACETATE ION, Dehydroascorbate reductase, GLYCEROL
著者Kumar, A.O, Das, B.K, Arockiasamy, A.
登録日2015-11-20
公開日2016-05-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Non-native ligands define the active site of Pennisetum glaucum (L.) R. Br dehydroascorbate reductase.
Biochem.Biophys.Res.Commun., 473, 2016
8BR4
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BU of 8br4 by Molmil
Structure of GAPDH from Mycobacterium tuberculosis
分子名称: 1,2-ETHANEDIOL, Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Kumar, A, Karthikeyan, S.
登録日2022-11-22
公開日2023-11-01
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献Structure of GAPDH from Mycobacterium tuberculosis
To Be Published
7VMF
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Crystal structure of Arabidopsis thaliana HDT2
分子名称: Histone deacetylase HDT2, SODIUM ION
著者Kumar, A, Bobde, R.C, Vasudevan, D.
登録日2021-10-08
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Plant-specific HDT family histone deacetylases are nucleoplasmins.
Plant Cell, 34, 2022
4DJJ
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BU of 4djj by Molmil
Crystal structure of the complex of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Pimelic acid at 2.9 Angstrom resolution
分子名称: PIMELIC ACID, Peptidyl-tRNA hydrolase
著者Kumar, A, Singh, A, Singh, N, Sinha, M, Sharma, S, Arora, A, Singh, T.P.
登録日2012-02-02
公開日2012-03-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Crystal structure of the complex of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Pimelic acid at 2.9 Angstrom resolution
To be Published
1JYM
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Crystals of Peptide Deformylase from Plasmodium falciparum with Ten Subunits per Asymmetric Unit Reveal Critical Characteristics of the Active Site for Drug Design
分子名称: COBALT (II) ION, Peptide Deformylase
著者Kumar, A, Nguyen, K.T, Srivathsan, S, Ornstein, B, Turley, S, Hirsh, I, Pei, D, Hol, W.G.J.
登録日2001-09-12
公開日2002-03-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystals of peptide deformylase from Plasmodium falciparum reveal critical characteristics of the active site for drug design.
Structure, 10, 2002

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