Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 390 件

3RBV
DownloadVisualize
BU of 3rbv by Molmil
Crystal Structure of KijD10, a 3-ketoreductase from Actinomadura kijaniata incomplex with NADP
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Holden, H.M, Kubiak, R.L.
登録日2011-03-30
公開日2011-06-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Combined Structural and Functional Investigation of a C-3''-Ketoreductase Involved in the Biosynthesis of dTDP-l-Digitoxose.
Biochemistry, 50, 2011
3RC2
DownloadVisualize
BU of 3rc2 by Molmil
Crystal Structure of KijD10, a 3-ketoreductase from Actinomadura kijaniata in complex with TDP-benzene and NADP; open conformation
分子名称: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, CHLORIDE ION, ...
著者Holden, H.M, Kubiak, R.L.
登録日2011-03-30
公開日2011-06-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Combined Structural and Functional Investigation of a C-3''-Ketoreductase Involved in the Biosynthesis of dTDP-l-Digitoxose.
Biochemistry, 50, 2011
3RCB
DownloadVisualize
BU of 3rcb by Molmil
Crystal structure of the K102E mutant of KijD10, a 3-ketoreductase from Actinomadura kijaniata in complex with TDP-benzene and NADP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Holden, H.M, Kubiak, R.L.
登録日2011-03-30
公開日2011-06-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Combined Structural and Functional Investigation of a C-3''-Ketoreductase Involved in the Biosynthesis of dTDP-l-Digitoxose.
Biochemistry, 50, 2011
3RC7
DownloadVisualize
BU of 3rc7 by Molmil
Crystal Structure of the Y186F mutant of KijD10, a 3-ketoreductase from Actinomadura kijaniata in complex with TDP-benzene and NADP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Holden, H.M, Kubiak, R.L.
登録日2011-03-30
公開日2011-06-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Combined Structural and Functional Investigation of a C-3''-Ketoreductase Involved in the Biosynthesis of dTDP-l-Digitoxose.
Biochemistry, 50, 2011
3RC1
DownloadVisualize
BU of 3rc1 by Molmil
Crystal Structure of KijD10, a 3-ketoreductase from Actinomadura kijaniata incomplex with NADP and TDP-benzene
分子名称: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, CHLORIDE ION, ...
著者Holden, H.M, Kubiak, R.L.
登録日2011-03-30
公開日2011-06-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Combined Structural and Functional Investigation of a C-3''-Ketoreductase Involved in the Biosynthesis of dTDP-l-Digitoxose.
Biochemistry, 50, 2011
3O9Z
DownloadVisualize
BU of 3o9z by Molmil
Crystal structure of the WlbA (WbpB) dehydrogenase from Thermus thermophilus in complex with NAD and alpha-ketoglutarate at 1.45 angstrom resolution
分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Holden, H.M, Thoden, J.B.
登録日2010-08-04
公開日2010-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献Structural and Functional Studies of WlbA: A Dehydrogenase Involved in the Biosynthesis of 2,3-Diacetamido-2,3-dideoxy-d-mannuronic Acid .
Biochemistry, 49, 2010
3FSB
DownloadVisualize
BU of 3fsb by Molmil
Crystal structure of QdtC, the dTDP-3-amino-3,6-dideoxy-D-glucose N-acetyl transferase from Thermoanaerobacterium thermosaccharolyticum in complex with CoA and dTDP-3-amino-quinovose
分子名称: COENZYME A, QdtC, [(3R,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate
著者Holden, H.M, Thoden, J.B.
登録日2009-01-09
公開日2009-02-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and Functional Studies of QdtC: an N-Acetyltransferase Required for the Biosynthesis of dTDP-3-Acetamido-3,6-Dideoxy-alpha-D-Glucose.
Biochemistry, 48, 2009
3FSC
DownloadVisualize
BU of 3fsc by Molmil
Crystal structure of QdtC, the dTDP-3-amino-3,6-dideoxy-D-glucose N-acetyl transferase from Thermoanaerobacterium thermosaccharolyticum in complex with CoA and dTDP-3-amino-fucose
分子名称: (3R,4S,5R,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate, COENZYME A, QdtC
著者Holden, H.M, Thoden, J.B.
登録日2009-01-09
公開日2009-02-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Functional Studies of QdtC: an N-Acetyltransferase Required for the Biosynthesis of dTDP-3-Acetamido-3,6-Dideoxy-alpha-D-Glucose.
Biochemistry, 48, 2009
3FS8
DownloadVisualize
BU of 3fs8 by Molmil
Crystal structure of QdtC, the dTDP-3-amino-3,6-dideoxy-D-glucose N-acetyl transferase from Thermoanaerobacterium thermosaccharolyticum in complex with Acetyl-CoA
分子名称: ACETYL COENZYME *A, QdtC, THYMINE
著者Holden, H.M, Thoden, J.B.
登録日2009-01-09
公開日2009-02-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Functional Studies of QdtC: an N-Acetyltransferase Required for the Biosynthesis of dTDP-3-Acetamido-3,6-Dideoxy-alpha-D-Glucose.
Biochemistry, 48, 2009
5TMN
DownloadVisualize
BU of 5tmn by Molmil
Slow-and fast-binding inhibitors of thermolysin display different modes of binding. crystallographic analysis of extended phosphonamidate transition-state analogues
分子名称: CALCIUM ION, N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-leucyl-L-leucine, THERMOLYSIN, ...
著者Holden, H.M, Tronrud, D.E, Monzingo, A.F, Weaver, L.H, Matthews, B.W.
登録日1987-06-29
公開日1989-01-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Slow- and fast-binding inhibitors of thermolysin display different modes of binding: crystallographic analysis of extended phosphonamidate transition-state analogues.
Biochemistry, 26, 1987
1BVQ
DownloadVisualize
BU of 1bvq by Molmil
THREE-DIMENSIONAL STRUCTURE OF 4-HYDROXYBENZOYL COA THIOESTERASE FROM PSEUDOMONAS SP. STRAIN CBS-3.
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PROTEIN (4-HYDROXYBENZOYL COA THIOESTERASE)
著者Holden, H.M, Benning, M.M, Dunaway-Mariano, D.
登録日1998-09-16
公開日1998-09-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The three-dimensional structure of 4-hydroxybenzoyl-CoA thioesterase from Pseudomonas sp. Strain CBS-3.
J.Biol.Chem., 273, 1998
5U1Z
DownloadVisualize
BU of 5u1z by Molmil
X-ray structure of the WlarG aminotransferase, apo form, from Campylobacter jejune
分子名称: CHLORIDE ION, Putative aminotransferase, SODIUM ION
著者Holden, H.M, Thoden, J.B, Dow, G.T, Gilbert, M.
登録日2016-11-29
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.
Protein Sci., 26, 2017
5TPU
DownloadVisualize
BU of 5tpu by Molmil
x-ray structure of the WlaRB TDP-quinovose 3,4-ketoisomerase from campylobacter jejuni
分子名称: CHLORIDE ION, Putative uncharacterized protein, THYMIDINE-5'-DIPHOSPHATE
著者Holden, H.M, Thoden, J.B, Li, J.Z, Riegert, A.S, Goneau, M.-F, Cunningham, A.M, Vinogradov, E, Schoenhofen, I.C, Gilbert, M.
登録日2016-10-21
公開日2017-02-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization of the dTDP-Fuc3N and dTDP-Qui3N biosynthetic pathways in Campylobacter jejuni 81116.
Glycobiology, 27, 2017
5U23
DownloadVisualize
BU of 5u23 by Molmil
X-ray structure of the WlaRG aminotransferase from Campylobacter jejuni in complex with TDP-Qui3N
分子名称: (2R,3R,4S,5S,6R)-3,5-dihydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate, 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ...
著者Holden, H.M, Thoden, J.B, Dow, G.T, Gilbert, M.
登録日2016-11-29
公開日2017-01-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.
Protein Sci., 26, 2017
5T64
DownloadVisualize
BU of 5t64 by Molmil
X-ray structure of the C3-methyltransferase KijD1 from Actinomadura kijaniata in complex with TDP and SAH
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Holden, H.M, Thoden, J.B, DOW, G.T.
登録日2016-09-01
公開日2016-09-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural studies on KijD1, a sugar C-3'-methyltransferase.
Protein Sci., 25, 2016
5U24
DownloadVisualize
BU of 5u24 by Molmil
X-ray structure of the WlaRG aminotransferase from campylobacter jejuni, K184A mutant in complex with TDP-Fuc3N
分子名称: (2R,3R,4S,5R,6R)-3,5-dihydroxy-4-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name), 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Holden, H.M, Thoden, J.B, Dow, G.T, Gilbert, M.
登録日2016-11-29
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.
Protein Sci., 26, 2017
5T67
DownloadVisualize
BU of 5t67 by Molmil
x-ray structure of the KijD1 C3-methyltransferase from Actinomadura kijaniata in complex with SAH and dTDP-sugar product
分子名称: (2R,4S,6R)-4-amino-4,6-dimethyl-5-oxotetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name), 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Holden, H.M, Thoden, J.B, Dow, G.T.
登録日2016-09-01
公開日2016-09-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural studies on KijD1, a sugar C-3'-methyltransferase.
Protein Sci., 25, 2016
5TPV
DownloadVisualize
BU of 5tpv by Molmil
X-ray structure of WlaRA (TDP-fucose-3,4-ketoisomerase) from Campylobacter jejuni
分子名称: PHOSPHATE ION, THYMIDINE-5'-DIPHOSPHATE, WlaRA, ...
著者Holden, H.M, Thoden, J.B, Li, Z.A, Riegert, A.S, Goneau, M.-F, Cunningham, A.M, Vinograd, E, Schoenhofen, I.C, Gilbert, M, Li, J.
登録日2016-10-21
公開日2017-02-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Characterization of the dTDP-Fuc3N and dTDP-Qui3N biosynthetic pathways in Campylobacter jejuni 81116.
Glycobiology, 27, 2017
1EYW
DownloadVisualize
BU of 1eyw by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE ZINC-CONTAINING PHOSPHOTRIESTERASE WITH BOUND SUBSTRATE ANALOG TRIETHYLPHOSPHATE
分子名称: 2-PHENYL-ETHANOL, PHOSPHOTRIESTERASE, TRIETHYL PHOSPHATE, ...
著者Holden, H.M, Benning, M.M, Raushel, F.M, Hong, S.-B.
登録日2000-05-09
公開日2000-12-20
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The binding of substrate analogs to phosphotriesterase.
J.Biol.Chem., 275, 2000
1FTP
DownloadVisualize
BU of 1ftp by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE MUSCLE FATTY-ACID-BINDING PROTEIN ISOLATED FROM THE DESERT LOCUST, SCHISTOCERCA GREGARIA
分子名称: MUSCLE FATTY ACID BINDING PROTEIN
著者Holden, H.M, Haunerland, N.H.
登録日1994-07-06
公開日1994-12-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Three-dimensional structure of the muscle fatty-acid-binding protein isolated from the desert locust Schistocerca gregaria.
Biochemistry, 33, 1994
1EI6
DownloadVisualize
BU of 1ei6 by Molmil
CRYSTAL STRUCTURE OF PHOSPHONOACETATE HYDROLASE COMPLEXED WITH PHOSPHONOFORMATE
分子名称: L(+)-TARTARIC ACID, PHOSPHONOACETATE HYDROLASE, PHOSPHONOFORMIC ACID, ...
著者Holden, H.M, Benning, M.M, Dunaway-Mariano, D, Kim, A.D.
登録日2000-02-24
公開日2003-11-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Phosphonoacetate Hydrolase complexed with phosphonoformate
To be Published
1EZ2
DownloadVisualize
BU of 1ez2 by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE ZINC-CONTAINING PHOSPHOTRIESTERASE WITH BOUND SUBSTRATE ANALOG DIISOPROPYLMETHYL PHOSPHONATE.
分子名称: METHYLPHOSPHONIC ACID DIISOPROPYL ESTER, PHOSPHOTRIESTERASE, ZINC ION
著者Holden, H.M, Benning, M.M, Raushel, F.M, Hong, S.-B.
登録日2000-05-09
公開日2000-12-20
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The binding of substrate analogs to phosphotriesterase.
J.Biol.Chem., 275, 2000
1HZY
DownloadVisualize
BU of 1hzy by Molmil
HIGH RESOLUTION STRUCTURE OF THE ZINC-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA
分子名称: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, FORMIC ACID, ...
著者Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H.
登録日2001-01-26
公開日2001-04-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta.
Biochemistry, 40, 2001
1I0B
DownloadVisualize
BU of 1i0b by Molmil
HIGH RESOLUTION STRUCTURE OF THE MANGANESE-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA
分子名称: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, FORMIC ACID, ...
著者Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H.
登録日2001-01-29
公開日2001-04-04
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta.
Biochemistry, 40, 2001
1I0D
DownloadVisualize
BU of 1i0d by Molmil
HIGH RESOLUTION STRUCTURE OF THE ZINC/CADMIUM-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA
分子名称: 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, CADMIUM ION, ...
著者Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H.
登録日2001-01-29
公開日2001-04-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta.
Biochemistry, 40, 2001

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon