Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 59 results

1E72
DownloadVisualize
BU of 1e72 by Molmil
Myrosinase from Sinapis alba with bound gluco-hydroximolactam and sulfate or ascorbate
Descriptor: (2S,3S,4R,5R)-6-(HYDROXYAMINO)-2-(HYDROXYMETHYL)-2,3,4,5-TETRAHYDROPYRIDINE-3,4,5-TRIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Burmeister, W.P.
Deposit date:2000-08-23
Release date:2001-01-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High resolution X-ray crystallography shows that ascorbate is a cofactor for myrosinase and substitutes for the function of the catalytic base.
J. Biol. Chem., 275, 2000
1E70
DownloadVisualize
BU of 1e70 by Molmil
2-F-glucosylated MYROSINASE FROM SINAPIS ALBA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-2-fluoro-alpha-D-glucopyranose, ...
Authors:Burmeister, W.P.
Deposit date:2000-08-23
Release date:2001-01-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:High Resolution X-Ray Crystallography Shows that Ascorbate is a Cofactor for Myrosinase and Substitutes for the Function of the Catalytic Base
J.Biol.Chem., 275, 2000
1DWG
DownloadVisualize
BU of 1dwg by Molmil
STUDY ON RADIATION DAMAGE ON A CRYOCOOLED CRYSTAL: PART 3 STRUCTURE AFTER IRRADIATION WITH 18.2*10E15 PHOTONS/MM2.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Burmeister, W.P.
Deposit date:1999-12-05
Release date:2000-03-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Changes in a Cryo-Cooled Protein Crystal due to Radiation Damage
Acta Crystallogr.,Sect.D, 56, 2000
4PB6
DownloadVisualize
BU of 4pb6 by Molmil
Feline calicivirus VP1 T=1 virus-like particle
Descriptor: VP1
Authors:Burmeister, W.P, Buisson, M.
Deposit date:2014-04-11
Release date:2015-04-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (8 Å)
Cite:Structure determination of feline calicivirus virus-like particles in the context of a pseudo-octahedral arrangement.
Plos One, 10, 2015
2J8X
DownloadVisualize
BU of 2j8x by Molmil
Epstein-Barr virus uracil-DNA glycosylase in complex with Ugi from PBS-2
Descriptor: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR, UREA
Authors:Geoui, T, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2006-10-31
Release date:2006-12-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:New Insights on the Role of the Gamma-Herpesvirus Uracil-DNA Glycosylase Leucine Loop Revealed by the Structure of the Epstein-Barr Virus Enzyme in Complex with an Inhibitor Protein.
J.Mol.Biol., 366, 2007
8QAM
DownloadVisualize
BU of 8qam by Molmil
vaccinia virus Uracil DNA glycosidase mutant I197K-V200E-L204K
Descriptor: GLYCEROL, SULFATE ION, Uracil-DNA glycosylase
Authors:Tarbouriech, N, Burmeister, W.P.
Deposit date:2023-08-23
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus.
Plos Pathog., 20, 2024
2WE0
DownloadVisualize
BU of 2we0 by Molmil
EBV dUTPase mutant Cys4Ser
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, MALATE LIKE INTERMEDIATE, ...
Authors:Freeman, L, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis.
J.Biol.Chem., 284, 2009
4YIG
DownloadVisualize
BU of 4yig by Molmil
vaccinia virus D4/A20(1-50) in complex with dsDNA containing an abasic site and free uracyl
Descriptor: DNA (5'-D(*AP*AP*GP*AP*TP*AP*AP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*TP*(ORP)P*AP*TP*CP*TP*T)-3'), DNA polymerase processivity factor component A20, ...
Authors:tarbouriech, N, burmeister, W.P, iseni, F.
Deposit date:2015-03-02
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the Vaccinia Virus Uracil-DNA Glycosylase in Complex with DNA.
J.Biol.Chem., 290, 2015
1R4G
DownloadVisualize
BU of 1r4g by Molmil
Solution structure of the Sendai virus protein X C-subdomain
Descriptor: RNA polymerase alpha subunit
Authors:Blanchard, L, Tarbouriech, N, Blackledge, M, Timmins, P, Burmeister, W.P, Ruigrok, R.W, Marion, D.
Deposit date:2003-10-06
Release date:2004-03-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and dynamics of the nucleocapsid-binding domain of the Sendai virus phosphoprotein in solution
Virology, 319, 2004
4YGM
DownloadVisualize
BU of 4ygm by Molmil
Vaccinia virus his-D4/A20(1-50) in complex with uracil
Descriptor: DNA polymerase processivity factor component A20, SULFATE ION, URACIL, ...
Authors:Tarbouriech, N, Iseni, F, Burmeister, W.P.
Deposit date:2015-02-26
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Vaccinia Virus Uracil-DNA Glycosylase in Complex with DNA.
J.Biol.Chem., 290, 2015
1H7Z
DownloadVisualize
BU of 1h7z by Molmil
Adenovirus Ad3 fibre head
Descriptor: ADENOVIRUS FIBRE PROTEIN, SULFATE ION
Authors:Durmort, C, Stehlin, C, Schoehn, G, Mitraki, A, Drouet, E, Cusack, S, Burmeister, W.P.
Deposit date:2001-01-21
Release date:2001-07-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Fiber Head of Ad3, a Non-Car-Binding Serotype of Adenovirus
Virology, 285, 2001
2W45
DownloadVisualize
BU of 2w45 by Molmil
Epstein-Barr virus alkaline nuclease
Descriptor: ALKALINE EXONUCLEASE
Authors:Buisson, M, Geoui, T, Flot, D, Tarbouriech, N, Burmeister, W.P.
Deposit date:2008-11-21
Release date:2009-06-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Bridge Crosses the Active Site Canyon of the Epstein-Barr Virus Nuclease with DNase and Rnase Activity.
J.Mol.Biol., 391, 2009
2W4B
DownloadVisualize
BU of 2w4b by Molmil
Epstein-Barr virus alkaline nuclease D203S mutant
Descriptor: ALKALINE EXONUCLEASE
Authors:Buisson, M, Geoui, T, Flot, D, Tarbouriech, N, Burmeister, W.P.
Deposit date:2008-11-24
Release date:2009-06-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:A Bridge Crosses the Active Site Canyon of the Epstein-Barr Virus Nuclease with DNase and Rnase Activity.
J.Mol.Biol., 391, 2009
5JKS
DownloadVisualize
BU of 5jks by Molmil
vaccinia virus D4 R167A mutant /A20(1-50)
Descriptor: DNA polymerase processivity factor component A20, SULFATE ION, Uracil-DNA glycosylase
Authors:Contesto-Richefeu, C, Tarbouriech, N, Brazzolotto, X, Burmeister, W.P, Peyrefitte, C.N, Iseni, F.
Deposit date:2016-04-26
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural analysis of point mutations at the Vaccinia virus A20/D4 interface.
Acta Crystallogr.,Sect.F, 72, 2016
5JKT
DownloadVisualize
BU of 5jkt by Molmil
vaccinia virus D4 P173G mutant /A20(1-50)
Descriptor: ACETATE ION, DNA polymerase processivity factor component A20, SULFATE ION, ...
Authors:Contesto-Richefeu, C, Tarbouriech, N, Brazzolotto, X, Burmeister, W.P, Peyrefitte, C.N, Iseni, F.
Deposit date:2016-04-26
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural analysis of point mutations at the Vaccinia virus A20/D4 interface.
Acta Crystallogr.,Sect.F, 72, 2016
5JKR
DownloadVisualize
BU of 5jkr by Molmil
vaccinia virus D4/A20(1-50)w43a mutant
Descriptor: DNA polymerase processivity factor component A20, SULFATE ION, Uracil-DNA glycosylase
Authors:Contesto-Richefeu, C, Tarbouriech, N, Brazzolotto, X, Burmeister, W.P, Peyrefitte, C.N, Iseni, F.
Deposit date:2016-04-26
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of point mutations at the Vaccinia virus A20/D4 interface.
Acta Crystallogr.,Sect.F, 72, 2016
2WE1
DownloadVisualize
BU of 2we1 by Molmil
EBV dUTPase mutant Asp131Asn with bound dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, SULFATE ION
Authors:Freeman, L, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis.
J.Biol.Chem., 284, 2009
2WE2
DownloadVisualize
BU of 2we2 by Molmil
EBV dUTPase double mutant Gly78Asp-Asp131Ser with dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, SULFATE ION
Authors:Freeman, L, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis.
J.Biol.Chem., 284, 2009
2WE3
DownloadVisualize
BU of 2we3 by Molmil
EBV dUTPase inactive mutant deleted of motif V
Descriptor: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, DEOXYURIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Freeman, L, Buisson, M, Tarbouriech, N, Burmeister, W.P.
Deposit date:2009-03-27
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Flexible Motif V of Epstein-Barr Virus Deoxyuridine 5'-Triphosphate Pyrophosphatase is Essential for Catalysis.
J.Biol.Chem., 284, 2009
2BSY
DownloadVisualize
BU of 2bsy by Molmil
Epstein Barr Virus dUTPase
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, SULFATE ION
Authors:Tarbouriech, N, Buisson, M, Seigneurin, J.-M, Cusack, S, Burmeister, W.P.
Deposit date:2005-05-24
Release date:2005-09-15
Last modified:2023-03-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Monomeric Dutpase from Epstein-Barr Virus Mimics Trimeric Dutpases
Structure, 13, 2005
2BT1
DownloadVisualize
BU of 2bt1 by Molmil
Epstein Barr Virus dUTPase in complex with a,b-imino dUTP
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, MAGNESIUM ION
Authors:Tarbouriech, N, Buisson, M, Seigneurin, J.-M, Cusack, S, Burmeister, W.P.
Deposit date:2005-05-24
Release date:2005-09-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Monomeric Dutpase from Epstein-Barr Virus Mimics Trimeric Dutpases
Structure, 13, 2005
2CH8
DownloadVisualize
BU of 2ch8 by Molmil
Structure of the Epstein-Barr Virus Oncogene BARF1
Descriptor: 33 KDA EARLY PROTEIN, PLATINUM (II) ION, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Tarbouriech, N, Ruggiero, F, deTurenne-Tessier, M, Ooka, T, Burmeister, W.P.
Deposit date:2006-03-13
Release date:2006-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Epstein-Barr Virus Oncogene Barf1
J.Mol.Biol., 359, 2006
5N2E
DownloadVisualize
BU of 5n2e by Molmil
Structure of the E9 DNA polymerase from vaccinia virus
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Tarbouriech, N, Burmeister, W.P, Iseni, F.
Deposit date:2017-02-07
Release date:2017-11-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding.
Nat Commun, 8, 2017
5N2H
DownloadVisualize
BU of 5n2h by Molmil
Structure of the E9 DNA polymerase exonuclease deficient mutant (D166A+E168A) from vaccinia virus
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Tarbouriech, N, Burmeister, W.P, Iseni, F.
Deposit date:2017-02-07
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding.
Nat Commun, 8, 2017
5N2G
DownloadVisualize
BU of 5n2g by Molmil
Structure of the E9 DNA polymerase from vaccinia virus in complex with manganese
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Tarbouriech, N, Burmeister, W.P, Iseni, F.
Deposit date:2017-02-07
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding.
Nat Commun, 8, 2017

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon