Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1135 results

5BOF
DownloadVisualize
BU of 5bof by Molmil
Crystal Structure of Staphylococcus aureus Enolase
Descriptor: Enolase, MAGNESIUM ION, SULFATE ION
Authors:Wu, Y.F, Wang, C.L, Wu, M.H, Han, L, Zhang, X, Zang, J.Y.
Deposit date:2015-05-27
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Octameric structure of Staphylococcus aureus enolase in complex with phosphoenolpyruvate.
Acta Crystallogr.,Sect.D, 71, 2015
7QXI
DownloadVisualize
BU of 7qxi by Molmil
Cryo-EM structure of RNA polymerase-sigma54 holo enzyme with promoter DNA closed complex
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Ye, F.Z, Zhang, X.D.
Deposit date:2022-01-26
Release date:2022-11-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanisms of DNA opening revealed in AAA+ transcription complex structures.
Sci Adv, 8, 2022
7QV9
DownloadVisualize
BU of 7qv9 by Molmil
CryoEM structure of bacterial transcription intermediate complex mediated by activator PspF
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, DNA-directed RNA polymerase subunit alpha, ...
Authors:Ye, F.Z, Zhang, X.D.
Deposit date:2022-01-20
Release date:2022-11-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanisms of DNA opening revealed in AAA+ transcription complex structures.
Sci Adv, 8, 2022
7QWP
DownloadVisualize
BU of 7qwp by Molmil
CryoEM structure of bacterial transcription close complex (RPc)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Ye, F.Z, Zhang, X.D.
Deposit date:2022-01-25
Release date:2022-11-09
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanisms of DNA opening revealed in AAA+ transcription complex structures.
Sci Adv, 8, 2022
1I85
DownloadVisualize
BU of 1i85 by Molmil
CRYSTAL STRUCTURE OF THE CTLA-4/B7-2 COMPLEX
Descriptor: CYTOTOXIC T-LYMPHOCYTE-ASSOCIATED PROTEIN 4, T LYMPHOCYTE ACTIVATION ANTIGEN CD86
Authors:Schwartz, J.-C.D, Zhang, X, Fedorov, A.A, Nathenson, S.G, Almo, S.C.
Deposit date:2001-03-12
Release date:2001-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for co-stimulation by the human CTLA-4/B7-2 complex.
Nature, 410, 2001
3JCU
DownloadVisualize
BU of 3jcu by Molmil
Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Wei, X.P, Zhang, X.Z, Su, X.D, Cao, P, Liu, X.Y, Li, M, Chang, W.R, Liu, Z.F.
Deposit date:2016-03-10
Release date:2016-05-25
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of spinach photosystem II-LHCII supercomplex at 3.2 A resolution
Nature, 534, 2016
5CG9
DownloadVisualize
BU of 5cg9 by Molmil
NgTET1 in complex with 5mC DNA in space group P3221
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, DNA (5'-D(*TP*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), ...
Authors:Hashimoto, H, Pais, J.E, Dai, N, Zhang, X, Zheng, Y, Cheng, X.
Deposit date:2015-07-09
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Nucleic Acids Res., 43, 2015
5CG8
DownloadVisualize
BU of 5cg8 by Molmil
NgTET1 in complex with 5hmC DNA
Descriptor: 2-OXOGLUTARIC ACID, DNA (5'-D(*AP*GP*AP*AP*TP*TP*CP*CP*GP*TP*TP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*(5HC)P*GP*GP*AP*AP*TP*TP*CP*T)-3'), ...
Authors:Hashimoto, H, Pais, J.E, Dai, N, Zhang, X, Zheng, Y, Cheng, X.
Deposit date:2015-07-09
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Nucleic Acids Res., 43, 2015
1SVU
DownloadVisualize
BU of 1svu by Molmil
Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions
Descriptor: Modification methylase HhaI, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Dong, A, Zhou, L, Zhang, X, Stickel, S, Roberts, R.J, Cheng, X.
Deposit date:2004-03-30
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions
Biol.Chem., 385, 2004
5BOE
DownloadVisualize
BU of 5boe by Molmil
Crystal structure of Staphylococcus aureus enolase in complex with PEP
Descriptor: Enolase, GLYCEROL, MAGNESIUM ION, ...
Authors:Wang, C.L, Wu, Y.F, Han, L, Wu, M.H, Zhang, X, Zang, J.Y.
Deposit date:2015-05-27
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Octameric structure of Staphylococcus aureus enolase in complex with phosphoenolpyruvate
Acta Crystallogr.,Sect.D, 71, 2015
5ZJI
DownloadVisualize
BU of 5zji by Molmil
Structure of photosystem I supercomplex with light-harvesting complexes I and II
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Pan, X.W, Ma, J, Su, X.D, Cao, P, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2018-03-20
Release date:2018-06-20
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the maize photosystem I supercomplex with light-harvesting complexes I and II.
Science, 360, 2018
5ZC3
DownloadVisualize
BU of 5zc3 by Molmil
The Crystal Structure of PcRxLR12
Descriptor: RxLR effector
Authors:Zhao, L, Zhang, X, Zhu, C.
Deposit date:2018-02-14
Release date:2018-08-15
Last modified:2018-09-12
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Crystal structure of the RxLR effector PcRxLR12 from Phytophthora capsici
Biochem. Biophys. Res. Commun., 503, 2018
1R7R
DownloadVisualize
BU of 1r7r by Molmil
The crystal structure of murine p97/VCP at 3.6A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Huyton, T, Pye, V.E, Briggs, L.C, Flynn, T.C, Beuron, F, Kondo, H, Ma, J, Zhang, X, Freemont, P.S.
Deposit date:2003-10-22
Release date:2003-12-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The crystal structure of murine p97/VCP at 3.6A
J.Struct.Biol., 144, 2003
1ICC
DownloadVisualize
BU of 1icc by Molmil
RAT OUTER MITOCHONDRIAL MEMBRANE CYTOCHROME B5
Descriptor: CYTOCHROME B5 OUTER MITOCHONDRIAL MEMBRANE ISOFORM, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Terzyan, S, Zhang, X.
Deposit date:2001-03-30
Release date:2001-09-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the differences between rat liver outer mitochondrial membrane cytochrome b5 and microsomal cytochromes b5.
Biochemistry, 40, 2001
3J6C
DownloadVisualize
BU of 3j6c by Molmil
Cryo-EM structure of MAVS CARD filament
Descriptor: Mitochondrial antiviral-signaling protein
Authors:Xu, H, He, X, Zheng, H, Huang, L.J, Hou, F, Yu, Z, de la Cruz, M.J, Borkowski, B, Zhang, X, Chen, Z.J, Jiang, Q.-X.
Deposit date:2014-02-04
Release date:2014-03-05
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.6 Å)
Cite:Structural basis for the prion-like MAVS filaments in antiviral innate immunity.
Elife, 3, 2014
5WTA
DownloadVisualize
BU of 5wta by Molmil
Crystal Structure of Staphylococcus aureus SdrE apo form
Descriptor: Serine-aspartate repeat-containing protein E
Authors:Wu, M, Zhang, Y, Hang, T, Wang, C, Yang, Y, Zang, J, Zhang, M, Zhang, X.
Deposit date:2016-12-10
Release date:2017-07-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Staphylococcus aureus SdrE captures complement factor H's C-terminus via a novel 'close, dock, lock and latch' mechanism for complement evasion
Biochem. J., 474, 2017
5WTB
DownloadVisualize
BU of 5wtb by Molmil
Complex Structure of Staphylococcus aureus SdrE with human complement factor H
Descriptor: Peptide from Complement factor H, Serine-aspartate repeat-containing protein E
Authors:Wu, M, Zhang, Y, Hang, T, Wang, C, Yang, Y, Zang, J, Zhang, M, Zhang, X.
Deposit date:2016-12-10
Release date:2017-07-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Staphylococcus aureus SdrE captures complement factor H's C-terminus via a novel 'close, dock, lock and latch' mechanism for complement evasion
Biochem. J., 474, 2017
1TU4
DownloadVisualize
BU of 1tu4 by Molmil
Crystal Structure of Rab5-GDP Complex
Descriptor: COBALT (II) ION, GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-5A, ...
Authors:Zhu, G, Zhai, P, Liu, J, Terzyan, S, Li, G, Zhang, X.C.
Deposit date:2004-06-24
Release date:2004-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of Rab5-Rabaptin5 interaction in endocytosis
Nat.Struct.Mol.Biol., 11, 2004
1L4D
DownloadVisualize
BU of 1l4d by Molmil
CRYSTAL STRUCTURE OF MICROPLASMINOGEN-STREPTOKINASE ALPHA DOMAIN COMPLEX
Descriptor: PLASMINOGEN, STREPTOKINASE, SULFATE ION
Authors:Wakeham, N, Terzyan, S, Zhai, P, Loy, J.A, Tang, J, Zhang, X.C.
Deposit date:2002-03-04
Release date:2002-12-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Effects of deletion of streptokinase residues 48-59 on plasminogen activation
PROTEIN ENG., 15, 2002
1X79
DownloadVisualize
BU of 1x79 by Molmil
Crystal structure of human GGA1 GAT domain complexed with the GAT-binding domain of Rabaptin5
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ADP-ribosylation factor binding protein GGA1, Rab GTPase binding effector protein 1, ...
Authors:Zhu, G, Zhang, X.C.
Deposit date:2004-08-13
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of human GGA1 GAT domain complexed with the GAT-binding domain of Rabaptin5.
EMBO J., 23, 2004
8WCJ
DownloadVisualize
BU of 8wcj by Molmil
Crystal structure of GB3 penta mutation L5V/K10H/T16S/K19E/Y33I
Descriptor: Immunoglobulin G-binding protein G
Authors:Qin, M.M, Chen, X.X, Zhang, X.Y, Song, X.F, Yao, L.S.
Deposit date:2023-09-12
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Protein Allostery Study in Cells Using NMR Spectroscopy.
Anal.Chem., 96, 2024
5ZZ8
DownloadVisualize
BU of 5zz8 by Molmil
Structure of the Herpes simplex virus type 2 C-capsid with capsid-vertex-specific component
Descriptor: Major capsid protein, UL17, UL25, ...
Authors:Wang, J.L, Yuan, S, Zhu, D.J, Tang, H, Wang, N, Chen, W.Y, Gao, Q, Li, Y.H, Wang, J.Z, Liu, H.R, Zhang, X.Z, Rao, Z.H, Wang, X.X.
Deposit date:2018-05-31
Release date:2018-10-10
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structure of the herpes simplex virus type 2 C-capsid with capsid-vertex-specific component.
Nat Commun, 9, 2018
1RUN
DownloadVisualize
BU of 1run by Molmil
CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA (5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*TP*CP*G )-3'), DNA (5'-D(*GP*CP*GP*AP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3'), ...
Authors:Parkinson, G.N, Gunasekera, A, Vojtechovsky, J, Zhang, X, Kunkel, T.A, Berman, H.M, Ebright, R.H.
Deposit date:1996-05-26
Release date:1997-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Aromatic hydrogen bond in sequence-specific protein DNA recognition.
Nat.Struct.Biol., 3, 1996
5A9G
DownloadVisualize
BU of 5a9g by Molmil
Manganese Superoxide Dismutase from Sphingobacterium sp. T2
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Rashid, G.M.M, Taylor, C.R, Liu, Y, Zhang, X, Rea, D, Fulop, V, Bugg, T.D.H.
Deposit date:2015-07-21
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Identification of Manganese Superoxide Dismutase from Sphingobacterium Sp. T2 as a Novel Bacterial Enzyme for Lignin Oxidation.
Acs Chem.Biol., 10, 2015
1TU3
DownloadVisualize
BU of 1tu3 by Molmil
Crystal Structure of Rab5 complex with Rabaptin5 C-terminal Domain
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Rab GTPase binding effector protein 1, ...
Authors:Zhu, G, Zhai, P, Liu, J, Terzyan, S, Li, G, Zhang, X.C.
Deposit date:2004-06-24
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis of Rab5-Rabaptin5 interaction in endocytosis
Nat.Struct.Mol.Biol., 11, 2004

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon