Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 756 件

8XG2
DownloadVisualize
BU of 8xg2 by Molmil
The structure of HLA-A/Pep14
分子名称: Beta-2-microglobulin, HLA class I heavy chain, Spike protein S1
著者Zhang, J.N, Yue, C, Liu, J.
登録日2023-12-14
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Uncommon P1 Anchor-featured Viral T Cell Epitope Preference within HLA-A*2601 and HLA-A*0101 Individuals.
Immunohorizons, 8, 2024
3TC1
DownloadVisualize
BU of 3tc1 by Molmil
Crystal Structure of Octaprenyl Pyrophosphate Synthase from Helicobacter pylori
分子名称: MAGNESIUM ION, Octaprenyl Pyrophosphate Synthase
著者Zhang, J.Y, Zhang, X.L, Li, D.F, Zou, Q.M, Wang, D.C.
登録日2011-08-08
公開日2011-08-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Octaprenyl Pyrophosphate Synthase from Helicobacter pylori
To be Published
1A4F
DownloadVisualize
BU of 1a4f by Molmil
BAR-HEADED GOOSE HEMOGLOBIN (OXY FORM)
分子名称: HEMOGLOBIN (ALPHA CHAIN), HEMOGLOBIN (BETA CHAIN), OXYGEN MOLECULE, ...
著者Zhang, J, Gu, X.
登録日1998-01-29
公開日1998-04-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of a high oxygen affinity species of haemoglobin (bar-headed goose haemoglobin in the oxy form).
J.Mol.Biol., 255, 1996
8WY8
DownloadVisualize
BU of 8wy8 by Molmil
Cryo-EM structure of DSR2 apo complex
分子名称: SIR2 family protein
著者Zhang, J.T, Jia, N, Liu, X.Y.
登録日2023-10-30
公開日2024-04-10
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8WY9
DownloadVisualize
BU of 8wy9 by Molmil
Cryo-EM structure of DSR2 apo (partial) complex
分子名称: SIR2 family protein
著者Zhang, J.T, Jia, N, Liu, X.Y.
登録日2023-10-30
公開日2024-04-10
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8WYD
DownloadVisualize
BU of 8wyd by Molmil
Cryo-EM structure of DSR2-DSAD1 complex
分子名称: Bacillus phage SPbeta DSAD1 protein, SIR2 family protein
著者Zhang, J.T, Jia, N, Liu, X.Y.
登録日2023-10-30
公開日2024-04-10
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8K75
DownloadVisualize
BU of 8k75 by Molmil
N-terminal domain of FIPV nucleocapsid protein
分子名称: Nucleoprotein
著者Zhang, J.T, Liang, R, Shi, Y.J, Peng, G.Q.
登録日2023-07-26
公開日2024-07-31
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献N-terminal domain of FIPV nucleocapsid protein
To Be Published
4TZW
DownloadVisualize
BU of 4tzw by Molmil
Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and replacing Mg2+ with Sr2+ post crystallization
分子名称: Ribosome-associated protein L7Ae-like, STRONTIUM ION, T-box Stem I, ...
著者Zhang, J, Ferre-D'Amare, A.R.
登録日2014-07-11
公開日2014-09-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (4.671 Å)
主引用文献Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
4TZZ
DownloadVisualize
BU of 4tzz by Molmil
Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate and increasing PEG3350 concentration from 20% to 45% post crystallization
分子名称: MAGNESIUM ION, Ribosome-associated protein L7Ae-like, T-box Stem I RNA, ...
著者Zhang, J, Ferre-D'Amare, A.R.
登録日2014-07-11
公開日2014-09-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.64 Å)
主引用文献Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
4TZP
DownloadVisualize
BU of 4tzp by Molmil
As Grown, Untreated Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its cognate tRNAGly, and B. subtilis YbxF protein
分子名称: Ribosome-associated protein L7Ae-like, engineered tRNA, glyQ T-box Stem I
著者Zhang, J, Ferre-D'Amare, A.R.
登録日2014-07-10
公開日2014-09-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (8.503 Å)
主引用文献Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
4TZX
DownloadVisualize
BU of 4tzx by Molmil
Vibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+
分子名称: ADENINE, MAGNESIUM ION, Vibrio vulnificus Adenine Riboswitch
著者Zhang, J, Ferre-D'Amare, A.R.
登録日2014-07-11
公開日2014-09-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
4TZV
DownloadVisualize
BU of 4tzv by Molmil
Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its Cognate tRNAGly, and B. subtilis YbxF protein, treated by removing lithium sulfate post crystallization
分子名称: Ribosome-associated protein L7Ae-like, T-box stem I, engineered tRNA
著者Zhang, J, Ferre-D'Amare, A.R.
登録日2014-07-11
公開日2014-09-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (5.03 Å)
主引用文献Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
4TZY
DownloadVisualize
BU of 4tzy by Molmil
Vibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+
分子名称: ADENINE, MAGNESIUM ION, STRONTIUM ION, ...
著者Zhang, J, Ferre-D'Amare, A.R.
登録日2014-07-11
公開日2014-09-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Dramatic Improvement of Crystals of Large RNAs by Cation Replacement and Dehydration.
Structure, 22, 2014
5D6P
DownloadVisualize
BU of 5d6p by Molmil
Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-ethyl-3-[4-(hydroxymethyl)-5-(1H-pyrrol-2-yl)-1,3-thiazol-2-yl]urea, DNA gyrase subunit B, ...
著者Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C.
登録日2015-08-12
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery of Azaindole Ureas as a Novel Class of Bacterial Gyrase B Inhibitors.
J.Med.Chem., 58, 2015
5D6Q
DownloadVisualize
BU of 5d6q by Molmil
Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-ethyl-3-{4-[(E)-2-(pyridin-3-yl)ethenyl]-5-(1H-pyrrol-2-yl)-1,3-thiazol-2-yl}urea, DNA gyrase subunit B, ...
著者Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C.
登録日2015-08-12
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Discovery of Azaindole Ureas as a Novel Class of Bacterial Gyrase B Inhibitors.
J.Med.Chem., 58, 2015
5D7C
DownloadVisualize
BU of 5d7c by Molmil
Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-ethyl-3-[1-(pyridin-2-yl)-6-(pyridin-3-yl)-1H-pyrrolo[3,2-b]pyridin-3-yl]urea, DNA gyrase subunit B, ...
著者Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C.
登録日2015-08-13
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Discovery of Azaindole Ureas as a Novel Class of Bacterial Gyrase B Inhibitors.
J.Med.Chem., 58, 2015
6TJY
DownloadVisualize
BU of 6tjy by Molmil
Crystal structure of haemagglutinin from (A/seal/Germany/1/2014) seal H10N7 influenza virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Zhang, J, Xiong, X, Purkiss, A, Walker, P, Gamblin, S, Skehel, J.J.
登録日2019-11-27
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals.
Cell Host Microbe, 28, 2020
6TJW
DownloadVisualize
BU of 6tjw by Molmil
Crystal structure of the haemagglutinin mutant (Gln226Leu, Del228) from an H10N7 seal influenza virus isolated in Germany
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, J, Xiong, X, Purkiss, A, Walker, P, Gamblin, S, Skehel, J.J.
登録日2019-11-27
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals.
Cell Host Microbe, 28, 2020
8W8D
DownloadVisualize
BU of 8w8d by Molmil
Structural mechanism of inhibition of the Rho transcription termination factor by Rof
分子名称: Protein rof, Transcription termination factor Rho
著者Zhang, J, Wang, C.
登録日2023-09-01
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献A widely conserved protein Rof inhibits transcription termination factor Rho and promotes Salmonella virulence program.
Nat Commun, 15, 2024
4TUW
DownloadVisualize
BU of 4tuw by Molmil
drosophila stem-loop binding protein complexed with histone mRNA stem-loop, phospho mimic of TPNK and C-terminal region
分子名称: CALCIUM ION, HISTONE MRNA 3' STEM LOOP, Histone RNA hairpin-binding protein
著者Zhang, J.
登録日2014-06-25
公開日2014-07-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TV0
DownloadVisualize
BU of 4tv0 by Molmil
Drosophila stem-loop binding protein complexed with histone mRNA stem-loop, Selenomethionine derivative
分子名称: CALCIUM ION, Histone RNA hairpin-binding protein, RNA (26-MER)
著者Zhang, J.
登録日2014-06-25
公開日2014-09-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TUX
DownloadVisualize
BU of 4tux by Molmil
drosophila stem-loop binding protein complexed with histone mRNA stem-loop
分子名称: CALCIUM ION, Histone RNA hairpin-binding protein, RNA (26-MER)
著者Zhang, J.
登録日2014-06-25
公開日2014-07-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Molecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation.
Proc.Natl.Acad.Sci.USA, 111, 2014
8WYC
DownloadVisualize
BU of 8wyc by Molmil
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ (partial) complex
分子名称: Bacillus phage SPR Tube protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SIR2-like domain-containing protein
著者Zhang, J.T, Jia, N, Liu, X.Y.
登録日2023-10-30
公開日2024-04-10
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8WYB
DownloadVisualize
BU of 8wyb by Molmil
Cryo-EM structure of DSR2 (H171A)-tube-NAD+ complex
分子名称: Bacillus phage SPR Tube protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SIR2-like domain-containing protein
著者Zhang, J.T, Jia, N, Liu, X.Y.
登録日2023-10-30
公開日2024-04-10
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural basis for phage-mediated activation and repression of bacterial DSR2 anti-phage defense system.
Nat Commun, 15, 2024
8FDW
DownloadVisualize
BU of 8fdw by Molmil
Cryo-EM structure of SARS-CoV-2 postfusion spike in membrane
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2, ...
著者Zhang, J, Shi, W, Cai, Y.F, Zhu, H.S, Peng, H.Q, Voyer, J, Volloch, S.R, Cao, H, Mayer, M.L, Song, K.K, Xu, C, Lu, J.M, Chen, B.
登録日2022-12-05
公開日2023-05-10
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 postfusion spike in membrane.
Nature, 619, 2023

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon