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PDB: 87 results

7PT3
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BU of 7pt3 by Molmil
Actinobacterial 2-hydroxyacyl-CoA lyase (AcHACL) mutant E493A structure in complex with substrate 2-HIB-CoA and inactive cofactor 3-deaza-ThDP
Descriptor: 2-hydroxyacyl-CoA lyase, 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zahn, M, Rohwerder, T.
Deposit date:2021-09-25
Release date:2022-02-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.625 Å)
Cite:Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA.
J.Biol.Chem., 298, 2022
7PT4
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BU of 7pt4 by Molmil
Actinobacterial 2-hydroxyacyl-CoA lyase (AcHACL) structure in complex with a covalently bound reaction intermediate as well as products formyl-CoA and acetone
Descriptor: 2-hydroxyacyl-CoA lyase, 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1R,11R,15S,17R)-19-[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]-1,11,15,17-TETRAHYDROXY-12,12-DIMETHYL-15,17-DIOXIDO-6,10-DIOXO-14,16,18-TRIOXA-2-THIA-5,9-DIAZA-15,17-DIPHOSPHANONADEC-1-YL}-5-(2-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, ACETONE, ...
Authors:Zahn, M, Rohwerder, T.
Deposit date:2021-09-25
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA.
J.Biol.Chem., 298, 2022
7Q06
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BU of 7q06 by Molmil
Crystal structure of TPADO in complex with 2-OH-TPA
Descriptor: 2-Hydroxyterephthalic acid, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Zahn, M, Kincannon, W.M, DuBois, J.L, McGeehan, J.E.
Deposit date:2021-10-14
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Biochemical and structural characterization of an aromatic ring-hydroxylating dioxygenase for terephthalic acid catabolism.
Proc.Natl.Acad.Sci.USA, 119, 2022
7Q05
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BU of 7q05 by Molmil
Crystal structure of TPADO in complex with TPA
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Lysozyme, ...
Authors:Zahn, M, Kincannon, W.M, DuBois, J.L, McGeehan, J.E.
Deposit date:2021-10-14
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Biochemical and structural characterization of an aromatic ring-hydroxylating dioxygenase for terephthalic acid catabolism.
Proc.Natl.Acad.Sci.USA, 119, 2022
7Q2A
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BU of 7q2a by Molmil
Crystal structure of AphC in complex with 4-ethylcatechol
Descriptor: 4-ethylbenzene-1,2-diol, CALCIUM ION, Catechol 2,3-dioxygenase, ...
Authors:Zahn, M, Grigg, J.C, Eltis, L.D, McGeehan, J.E.
Deposit date:2021-10-25
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Characterization of a phylogenetically distinct extradiol dioxygenase involved in the bacterial catabolism of lignin-derived aromatic compounds.
J.Biol.Chem., 298, 2022
7Q04
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BU of 7q04 by Molmil
Crystal structure of TPADO in a substrate-free state
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Lysozyme, ...
Authors:Zahn, M, Kincannon, W.M, DuBois, J.L, McGeehan, J.E.
Deposit date:2021-10-14
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.281 Å)
Cite:Biochemical and structural characterization of an aromatic ring-hydroxylating dioxygenase for terephthalic acid catabolism.
Proc.Natl.Acad.Sci.USA, 119, 2022
4DGJ
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BU of 4dgj by Molmil
Structure of a human enteropeptidase light chain variant
Descriptor: Enteropeptidase catalytic light chain
Authors:Zahn, M, Simeonov, P, Straeter, N.
Deposit date:2012-01-26
Release date:2012-04-18
Last modified:2020-10-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a supercharged variant of the human enteropeptidase light chain.
Proteins, 80, 2012
4E81
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BU of 4e81 by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with a short apidaecin peptide
Descriptor: Chaperone protein DnaK, SULFATE ION, apidaecin peptide fragment
Authors:Zahn, M, Straeter, N.
Deposit date:2012-03-19
Release date:2012-05-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Api88 is a novel antibacterial designer Peptide to treat systemic infections with multidrug-resistant gram-negative pathogens.
Acs Chem.Biol., 7, 2012
4EZP
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BU of 4ezp by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with A3-APO(residues 1 to 20)
Descriptor: APO-monomer, Chaperone protein DnaK, SULFATE ION
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4F01
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BU of 4f01 by Molmil
Crystal structure of an artificial dimeric DnaK complex
Descriptor: Chaperone protein DnaK
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4EZT
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BU of 4ezt by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with heliocin (residues 14 to 21)
Descriptor: Chaperone protein DnaK, Heliocin
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4EZR
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BU of 4ezr by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with the C-terminal part of drosocin (residues 12 to 19)
Descriptor: Chaperone protein DnaK, Drosocin
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4EZW
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BU of 4ezw by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with the designer peptide NRLLLTG
Descriptor: Chaperone protein DnaK, SULFATE ION, synthetic peptide NRLLLTG
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4EZO
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BU of 4ezo by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with PR-39 (residues 1 to 15)
Descriptor: Antibacterial protein PR-39, Chaperone protein DnaK, SULFATE ION
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4EZZ
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BU of 4ezz by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with the designer peptide ELPLVKI
Descriptor: Chaperone protein DnaK, synthetic peptide ELPLVKI
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4F00
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BU of 4f00 by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with an apidaecin fragment from the bumblebee (residues 3 to 11)
Descriptor: Apidaecin, Chaperone protein DnaK
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4EZQ
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BU of 4ezq by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with the C-terminal part of pyrrhocoricin (residues 12 to 20)
Descriptor: Chaperone protein DnaK, Pyrrhocoricin
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
4EZU
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BU of 4ezu by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with PR-bombesin in space group I222
Descriptor: Chaperone protein DnaK, Proline rich bombesin-related protein
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of DnaK in complex with proline rich antimicrobial peptides reveal two different peptide binding modes
To be Published
4EZS
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BU of 4ezs by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with metchnikowin (residues 20 to 26)
Descriptor: Chaperone protein DnaK, Metchnikowin, SULFATE ION
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of DnaK in complex with proline rich antimicrobial peptides reveal two different peptide binding modes
To be Published
4EZY
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BU of 4ezy by Molmil
Crystal structure of the substrate binding domain of E.coli DnaK in complex with the designer peptide NRLILTG
Descriptor: Chaperone protein DnaK, SULFATE ION, synthetic peptide NRLILTG
Authors:Zahn, M, Straeter, N.
Deposit date:2012-05-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Studies on the Forward and Reverse Binding Modes of Peptides to the Chaperone DnaK.
J.Mol.Biol., 425, 2013
6QGW
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BU of 6qgw by Molmil
Crystal structure of E.coli BamA beta-barrel in complex with nanobody E6
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, NanoE6, Outer membrane protein assembly factor BamA
Authors:Hartmann, J.-B, Kaur, H, Jakob, R.P, Zahn, M, Zimmermann, I, Seeger, M, Maier, T, Hiller, S.
Deposit date:2019-01-14
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.938 Å)
Cite:Identification of conformation-selective nanobodies against the membrane protein insertase BamA by an integrated structural biology approach.
J.Biomol.Nmr, 73, 2019
6QGY
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BU of 6qgy by Molmil
Crystal structure of E.coli BamA beta-barrel in complex with nanobody B12
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, NanoB12, Outer membrane protein assembly factor BamA
Authors:Hartmann, J.-B, Kaur, H, Jakob, R.P, Zahn, M, Zimmermann, I, Seeger, M, Maier, T, Hiller, S.
Deposit date:2019-01-14
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.509 Å)
Cite:Identification of conformation-selective nanobodies against the membrane protein insertase BamA by an integrated structural biology approach.
J.Biomol.Nmr, 73, 2019
6QGX
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BU of 6qgx by Molmil
Crystal structure of E.coli BamA beta-barrel in complex with nanobody F7
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, NanoF7, Outer membrane protein assembly factor BamA
Authors:Hartmann, J.-B, Kaur, H, Jakob, R.P, Zahn, M, Zimmermann, I, Seeger, M, Maier, T, Hiller, S.
Deposit date:2019-01-14
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of conformation-selective nanobodies against the membrane protein insertase BamA by an integrated structural biology approach.
J.Biomol.Nmr, 73, 2019
5O77
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BU of 5o77 by Molmil
Klebsiella pneumoniae OmpK35
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, OmpK35
Authors:van den berg, B, Pathania, M, Zahn, M.
Deposit date:2017-06-08
Release date:2018-06-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins.
Acs Infect Dis., 4, 2018
7OJY
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BU of 7ojy by Molmil
Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 6
Descriptor: 2-(2-chlorophenyl)sulfanyl-~{N}-[(4-cyanophenyl)methyl]-~{N}-[(5-oxidanyl-1,3,4-oxadiazol-2-yl)methyl]ethanamide, Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase, CHLORIDE ION
Authors:Ryan, M.D, Parkes, A.L, Southey, M, Andersen, O.A, Zahn, M, Barker, J, DeJonge, B.L.M.
Deposit date:2021-05-17
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Novel UDP- N -Acetylglucosamine Acyltransferase (LpxA) Inhibitors with Activity against Pseudomonas aeruginosa .
J.Med.Chem., 64, 2021

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PDB entries from 2024-07-10

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