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PDB: 165 件

7DCL
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BU of 7dcl by Molmil
Crystal structure of the Zn-directed tetramer of the engineered cyt cb 562 variant, C96I/A38S AB5
分子名称: CHLORIDE ION, HEME C, ZINC ION, ...
著者Song, W.J, Yu, J.
登録日2020-10-26
公開日2021-03-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Symmetry-related residues as promising hotspots for the evolution of de novo oligomeric enzymes.
Chem Sci, 12, 2021
6LIV
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BU of 6liv by Molmil
Crystal structure of Tyrosine decarboxylase in complex with PLP
分子名称: GLYCEROL, Tyrosine/DOPA decarboxylase 2
著者Wang, H, Yu, J, Yao, M.
登録日2019-12-13
公開日2020-02-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal structures clarify cofactor binding of plant tyrosine decarboxylase.
Biochem.Biophys.Res.Commun., 2019
6M16
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BU of 6m16 by Molmil
Cryo-EM structures of SADS-CoV spike glycoproteins
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Wang, X, Yu, J, Qiao, S, Guo, R.
登録日2020-02-24
公開日2020-05-27
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Cryo-EM structures of HKU2 and SADS-CoV spike glycoproteins provide insights into coronavirus evolution.
Nat Commun, 11, 2020
6LZH
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BU of 6lzh by Molmil
Crystal structure of Alpha/beta hydrolase GrgF from Penicillium sp. sh18
分子名称: GrgF, SODIUM ION
著者Wang, H, Yu, J, Wang, W.G, Matsuda, Y, Yao, M.
登録日2020-02-19
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Basis for the Biosynthesis of an Unusual Chain-Fused Polyketide, Gregatin A.
J.Am.Chem.Soc., 142, 2020
6M15
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BU of 6m15 by Molmil
Cryo-EM structures of HKU2 spike glycoproteins
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Wang, X, Yu, J, Qiao, S, Guo, R.
登録日2020-02-24
公開日2020-05-27
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献Cryo-EM structures of HKU2 and SADS-CoV spike glycoproteins provide insights into coronavirus evolution.
Nat Commun, 11, 2020
3A1Y
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BU of 3a1y by Molmil
The structure of archaeal ribosomal stalk P1/P0 complex
分子名称: 50S ribosomal protein P1 (L12P), Acidic ribosomal protein P0
著者Naganuma, T, Yao, M, Nomura, N, Yu, J, Uchiumi, T, Tanaka, I.
登録日2009-04-25
公開日2009-11-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes
J.Biol.Chem., 285, 2010
7DRP
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BU of 7drp by Molmil
Structure of ATP-grasp ligase PsnB complexed with phosphomimetic variant of minimal precursor, Mg, and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-grasp domain-containing protein, MAGNESIUM ION, ...
著者Song, I, Yu, J, Song, W, Kim, S.
登録日2020-12-29
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Molecular mechanism underlying substrate recognition of the peptide macrocyclase PsnB.
Nat.Chem.Biol., 17, 2021
7DRM
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BU of 7drm by Molmil
Structure of ATP-grasp ligase PsnB complexed with minimal precursor, Mg, and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-grasp domain-containing protein, MAGNESIUM ION, ...
著者Song, I, Yu, J, Song, W, Kim, S.
登録日2020-12-29
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Molecular mechanism underlying substrate recognition of the peptide macrocyclase PsnB.
Nat.Chem.Biol., 17, 2021
7DRN
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BU of 7drn by Molmil
Structure of ATP-grasp ligase PsnB complexed with precursor peptide PsnA2 and AMPPNP
分子名称: ATP-grasp domain-containing protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PsnA214-38, ...
著者Song, I, Yu, J, Song, W, Kim, S.
登録日2020-12-29
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.56 Å)
主引用文献Molecular mechanism underlying substrate recognition of the peptide macrocyclase PsnB.
Nat.Chem.Biol., 17, 2021
7DRO
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BU of 7dro by Molmil
Structure of ATP-grasp ligase PsnB complexed with minimal precursor
分子名称: ATP-grasp domain-containing protein, PsnA214-38, Precursor peptide
著者Song, I, Yu, J, Song, W, Kim, S.
登録日2020-12-29
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Molecular mechanism underlying substrate recognition of the peptide macrocyclase PsnB.
Nat.Chem.Biol., 17, 2021
7D5Z
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BU of 7d5z by Molmil
Crystal structure of EBV gH/gL bound with neutralizing antibody 1D8
分子名称: Envelope glycoprotein H, Envelope glycoprotein L, heavy chain of 1D8, ...
著者Zhu, Q, Shan, S, Yu, J, Wang, X, Zhang, L, Zeng, M.
登録日2020-09-28
公開日2021-10-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献A Neutralizing Antibody Targeting a New Site of Vulnerability on Epstein-Barr Virus gH/gL Protects against Dual-Tropic Infection
To Be Published
7E9X
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BU of 7e9x by Molmil
Trehalase of Arabidopsis thaliana acid mutant -D380A
分子名称: GLYCEROL, Trehalase
著者Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
登録日2021-03-05
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
7E9U
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BU of 7e9u by Molmil
Trehalase of Arabidopsis thaliana
分子名称: GLYCEROL, PHOSPHATE ION, SODIUM ION, ...
著者Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
登録日2021-03-05
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
7EAW
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BU of 7eaw by Molmil
Trehalase of Arabidopsis thaliana acid mutant -D380A trehalose complex
分子名称: GLYCEROL, Trehalase, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Taguchi, Y, Saburi, W, Yu, J, Imai, R, Yao, M, Mori, H.
登録日2021-03-08
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献pH-dependent alteration of substrate specificity of plant trehalase and its molecular mechanism
To Be Published
7F3A
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BU of 7f3a by Molmil
Arabidopsis thaliana GH1 beta-glucosidase AtBGlu42
分子名称: Beta-glucosidase 42, GLYCEROL
著者Horikoshi, S, Saburi, W, Yu, J, Yao, M.
登録日2021-06-16
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Substrate specificity of glycoside hydrolase family 1 beta-glucosidase AtBGlu42 from Arabidopsis thaliana and its molecular mechanism.
Biosci.Biotechnol.Biochem., 86, 2022

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件を2024-05-29に公開中

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