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PDB: 82 results

7W9X
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Crystal structure of Bacillus subtilis YugJ in complex with nickel
Descriptor: Iron-containing alcohol dehydrogenase, NICKEL (II) ION
Authors:Cho, H.Y, Nam, M.S, Hong, H.J, Song, W.S, Yoon, S.I.
Deposit date:2021-12-11
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Structural and Biochemical Analysis of the Furan Aldehyde Reductase YugJ from Bacillus subtilis.
Int J Mol Sci, 23, 2022
4NX9
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BU of 4nx9 by Molmil
Crystal structure of Pseudomonas aeruginosa flagellin FliC
Descriptor: Flagellin
Authors:Song, W.S, Yoon, S.I.
Deposit date:2013-12-09
Release date:2014-01-29
Last modified:2014-03-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of FliC flagellin from Pseudomonas aeruginosa and its implication in TLR5 binding and formation of the flagellar filament
Biochem.Biophys.Res.Commun., 444, 2014
4POO
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The crystal structure of Bacillus subtilis YtqB in complex with SAM
Descriptor: Putative RNA methylase, S-ADENOSYLMETHIONINE
Authors:Park, S.C, Song, W.S, Yoon, S.I.
Deposit date:2014-02-26
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of a putative SAM-dependent methyltransferase, YtqB, from Bacillus subtilis
Biochem.Biophys.Res.Commun., 446, 2014
4PON
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The crystal structure of a putative SAM-dependent methyltransferase, YtqB, from Bacillus subtilis
Descriptor: Putative RNA methylase
Authors:Park, S.C, Song, W.S, Yoon, S.I.
Deposit date:2014-02-26
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of a putative SAM-dependent methyltransferase, YtqB, from Bacillus subtilis
Biochem.Biophys.Res.Commun., 446, 2014
5YHI
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Crystal structure of YiiM from Escherichia coli
Descriptor: PHOSPHATE ION, Protein YiiM
Authors:Namgung, B, Kim, J.H, Song, W.S, Yoon, S.I.
Deposit date:2017-09-28
Release date:2018-03-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of the hydroxylaminopurine resistance protein, YiiM, and its putative molybdenum cofactor-binding catalytic site.
Sci Rep, 8, 2018
5Y8T
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Crystal structure of Bacillus subtilis PadR in complex with p-coumaric acid
Descriptor: 4'-HYDROXYCINNAMIC ACID, Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-08-21
Release date:2017-11-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR.
Nucleic Acids Res., 45, 2017
5ZIZ
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BU of 5ziz by Molmil
Crystal structure of Xanthomonas campestris FlgL (space group H3)
Descriptor: Flagellar hook protein FlgL
Authors:Hong, H.J, Kim, T.H, Song, W.S, Yoon, S.I.
Deposit date:2018-03-18
Release date:2018-10-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of FlgL and its implications for flagellar assembly
Sci Rep, 8, 2018
5ZJ0
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BU of 5zj0 by Molmil
Crystal structure of Xanthomonas campestris FlgL (space group C2)
Descriptor: Flagellar hook protein FlgL
Authors:Hong, H.J, Kim, T.H, Song, W.S, Yoon, S.I.
Deposit date:2018-03-18
Release date:2018-10-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of FlgL and its implications for flagellar assembly
Sci Rep, 8, 2018
5Z7B
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Crystal structure of the VanR transcription factor in complex with vanillate
Descriptor: 4-HYDROXY-3-METHOXYBENZOATE, PadR family transcriptional regulator
Authors:Kwak, Y.M, Park, S.C, Yoon, S.I.
Deposit date:2018-01-28
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the VanR transcription factor and the role of its unique alpha-helix in effector recognition.
FEBS J., 285, 2018
5ZIY
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Crystal structure of Bacillus cereus FlgL
Descriptor: Flagellar hook-associated protein 3, ZINC ION
Authors:Hong, H.J, Kim, T.H, Song, W.S, Yoon, S.I.
Deposit date:2018-03-18
Release date:2018-10-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of FlgL and its implications for flagellar assembly
Sci Rep, 8, 2018
5X12
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Crystal structure of Bacillus subtilis PadR
Descriptor: Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017
5X13
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Crystal structure of Bacillus subtilis PadR in complex with p-coumaric acid
Descriptor: 4'-HYDROXYCINNAMIC ACID, GLYCEROL, Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017
5XLJ
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Crystal structure of the flagellar cap protein flid D2-D3 domains from serratia marcescens in Space group P432
Descriptor: CHLORIDE ION, Flagellar hook-associated protein 2, SODIUM ION
Authors:Cho, S.Y, Song, W.S, Hong, H.J, Yoon, S.I.
Deposit date:2017-05-10
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tetrameric structure of the flagellar cap protein FliD from Serratia marcescens.
Biochem. Biophys. Res. Commun., 489, 2017
5XLK
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Crystal structure of the flagellar cap protein FliD D2-D3 domains from Serratia marcescens in Space group I422
Descriptor: Flagellar hook-associated protein 2, ZINC ION
Authors:Cho, S.Y, Song, W.S, Hong, H.J, Yoon, S.I.
Deposit date:2017-05-10
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Tetrameric structure of the flagellar cap protein FliD from Serratia marcescens.
Biochem. Biophys. Res. Commun., 489, 2017
5X11
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BU of 5x11 by Molmil
Crystal structure of Bacillus subtilis PadR in complex with operator DNA
Descriptor: DNA (28-MER), Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017
5X14
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BU of 5x14 by Molmil
Crystal structure of Bacillus subtilis PadR in complex with ferulic acid
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, GLYCEROL, Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017
5YHH
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BU of 5yhh by Molmil
Crystal structure of YiiM from Geobacillus stearothermophilus
Descriptor: Uncharacterized conserved protein YiiM
Authors:Namgung, B, Kim, J.H, Song, W.S, Yoon, S.I.
Deposit date:2017-09-28
Release date:2018-03-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the hydroxylaminopurine resistance protein, YiiM, and its putative molybdenum cofactor-binding catalytic site.
Sci Rep, 8, 2018
6IWY
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BU of 6iwy by Molmil
Crystal structure of the flagellar cap protein FliD from Helicobacter pylori
Descriptor: Flagellar hook-associated protein 2
Authors:Cho, S.Y, Song, W.S, Yoon, S.I.
Deposit date:2018-12-08
Release date:2019-05-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of the flagellar capping protein FliD from Helicobacter pylori.
Biochem.Biophys.Res.Commun., 514, 2019
7C51
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BU of 7c51 by Molmil
Crystal structure of a Simpl-like protein from Campylobacter jejuni (native protein)
Descriptor: SIMPL domain-containing protein
Authors:Oh, H.B, Yoon, S.I.
Deposit date:2020-05-18
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural analysis of a Simpl-like protein from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 529, 2020
7C50
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Crystal structure of a Simpl-like protein from Campylobacter jejuni (selenomethionine-incorporated protein)
Descriptor: SIMPL domain-containing protein
Authors:Oh, H.B, Yoon, S.I.
Deposit date:2020-05-18
Release date:2020-08-19
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural analysis of a Simpl-like protein from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 529, 2020
7C7Z
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BU of 7c7z by Molmil
Crystal structure of the flagellar junction protein FlgL from Legionella pneumophila
Descriptor: Flagellar hook-associated protein 3
Authors:Song, W.S, Hong, H.J, Yoon, S.I.
Deposit date:2020-05-27
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Structural study of the flagellar junction protein FlgL from Legionella pneumophila.
Biochem.Biophys.Res.Commun., 529, 2020
7CBV
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BU of 7cbv by Molmil
Crystal structure of the transcriptional regulator PadR from Bacillus subtilis (space group H32)
Descriptor: PadR family transcriptional regulator
Authors:Park, S.C, Song, W.S, Yoon, S.I.
Deposit date:2020-06-14
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Apo structure of the transcriptional regulator PadR from Bacillus subtilis: Structural dynamics and conserved Y70 residue.
Biochem.Biophys.Res.Commun., 530, 2020
6KNS
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BU of 6kns by Molmil
Crystal structure of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis (space group I4122)
Descriptor: CALCIUM ION, Putative metal-dependent hydrolase, ZINC ION
Authors:Na, H.W, Namgung, B, Song, W.S, Yoon, S.I.
Deposit date:2019-08-07
Release date:2019-09-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and biochemical analyses of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis.
Biochem.Biophys.Res.Commun., 519, 2019
6KTY
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Crystal structure of the flagellar cap protein FliD from Bdellovibrio bacteriovorus
Descriptor: Flagellar hook-associated protein 2
Authors:Cho, S.Y, Yoon, S.I.
Deposit date:2019-08-29
Release date:2019-10-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal structure of the flagellar cap protein FliD from Bdellovibrio bacteriovorus.
Biochem.Biophys.Res.Commun., 519, 2019
7E90
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BU of 7e90 by Molmil
Crystal structure of the receiver domain (D51E) of the response regulator VbrR from Vibrio parahaemolyticus
Descriptor: DNA-binding response regulator
Authors:Cho, S.Y, Yoon, S.I.
Deposit date:2021-03-03
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural analysis of the activation and DNA interactions of the response regulator VbrR from Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 555, 2021

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