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PDB: 97 results

5YHI
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BU of 5yhi by Molmil
Crystal structure of YiiM from Escherichia coli
Descriptor: PHOSPHATE ION, Protein YiiM
Authors:Namgung, B, Kim, J.H, Song, W.S, Yoon, S.I.
Deposit date:2017-09-28
Release date:2018-03-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of the hydroxylaminopurine resistance protein, YiiM, and its putative molybdenum cofactor-binding catalytic site.
Sci Rep, 8, 2018
6KNT
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BU of 6knt by Molmil
Crystal structure of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis (space group P4332)
Descriptor: Putative metal-dependent hydrolase, ZINC ION
Authors:Na, H.W, Namgung, B, Song, W.S, Yoon, S.I.
Deposit date:2019-08-07
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biochemical analyses of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis.
Biochem.Biophys.Res.Commun., 519, 2019
4NX9
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BU of 4nx9 by Molmil
Crystal structure of Pseudomonas aeruginosa flagellin FliC
Descriptor: Flagellin
Authors:Song, W.S, Yoon, S.I.
Deposit date:2013-12-09
Release date:2014-01-29
Last modified:2014-03-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of FliC flagellin from Pseudomonas aeruginosa and its implication in TLR5 binding and formation of the flagellar filament
Biochem.Biophys.Res.Commun., 444, 2014
7F2H
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BU of 7f2h by Molmil
Crystal structure of the sensor domain of VbrK from Vibrio rotiferianus (crystal type 2)
Descriptor: Histidine kinase
Authors:Cho, S.Y, Yoon, S.I.
Deposit date:2021-06-11
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the antibiotic- and nitrite-responsive histidine kinase VbrK sensor domain from Vibrio rotiferianus.
Biochem.Biophys.Res.Commun., 568, 2021
7F2G
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BU of 7f2g by Molmil
Crystal structure of the sensor domain of VbrK from Vibrio rotiferianus (crystal type 1)
Descriptor: Histidine kinase
Authors:Cho, S.Y, Yoon, S.I.
Deposit date:2021-06-11
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the antibiotic- and nitrite-responsive histidine kinase VbrK sensor domain from Vibrio rotiferianus.
Biochem.Biophys.Res.Commun., 568, 2021
7CBV
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BU of 7cbv by Molmil
Crystal structure of the transcriptional regulator PadR from Bacillus subtilis (space group H32)
Descriptor: PadR family transcriptional regulator
Authors:Park, S.C, Song, W.S, Yoon, S.I.
Deposit date:2020-06-14
Release date:2021-04-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Apo structure of the transcriptional regulator PadR from Bacillus subtilis: Structural dynamics and conserved Y70 residue.
Biochem.Biophys.Res.Commun., 530, 2020
7E90
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BU of 7e90 by Molmil
Crystal structure of the receiver domain (D51E) of the response regulator VbrR from Vibrio parahaemolyticus
Descriptor: DNA-binding response regulator
Authors:Cho, S.Y, Yoon, S.I.
Deposit date:2021-03-03
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural analysis of the activation and DNA interactions of the response regulator VbrR from Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 555, 2021
7W9Z
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BU of 7w9z by Molmil
Crystal structure of Bacillus subtilis YugJ in complex with NADP and nitrate
Descriptor: Iron-containing alcohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NITRATE ION
Authors:Cho, H.Y, Nam, M.S, Hong, H.J, Song, W.S, Yoon, S.I.
Deposit date:2021-12-11
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and Biochemical Analysis of the Furan Aldehyde Reductase YugJ from Bacillus subtilis.
Int J Mol Sci, 23, 2022
7W9Y
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BU of 7w9y by Molmil
Crystal structure of Bacillus subtilis YugJ in complex with NADP and nickel
Descriptor: Iron-containing alcohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NICKEL (II) ION
Authors:Cho, H.Y, Nam, M.S, Hong, H.J, Song, W.S, Yoon, S.I.
Deposit date:2021-12-11
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural and Biochemical Analysis of the Furan Aldehyde Reductase YugJ from Bacillus subtilis.
Int J Mol Sci, 23, 2022
7W9X
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BU of 7w9x by Molmil
Crystal structure of Bacillus subtilis YugJ in complex with nickel
Descriptor: Iron-containing alcohol dehydrogenase, NICKEL (II) ION
Authors:Cho, H.Y, Nam, M.S, Hong, H.J, Song, W.S, Yoon, S.I.
Deposit date:2021-12-11
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Structural and Biochemical Analysis of the Furan Aldehyde Reductase YugJ from Bacillus subtilis.
Int J Mol Sci, 23, 2022
7CUS
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BU of 7cus by Molmil
Crystal structure of the sensor domain of VbrK from Vibrio parahaemolyticus
Descriptor: DUF3404 domain-containing protein
Authors:Cho, S.Y, Yoon, S.I.
Deposit date:2020-08-24
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural analysis of the sensor domain of the beta-lactam antibiotic receptor VbrK from Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 533, 2020
7E92
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BU of 7e92 by Molmil
Crystal structure of the DNA-binding domain of the response regulator VbrR from Vibrio parahaemolyticus
Descriptor: DNA-binding response regulator
Authors:Cho, S.Y, Yoon, S.I.
Deposit date:2021-03-03
Release date:2021-04-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of the activation and DNA interactions of the response regulator VbrR from Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 555, 2021
7C7Z
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BU of 7c7z by Molmil
Crystal structure of the flagellar junction protein FlgL from Legionella pneumophila
Descriptor: Flagellar hook-associated protein 3
Authors:Song, W.S, Hong, H.J, Yoon, S.I.
Deposit date:2020-05-27
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Structural study of the flagellar junction protein FlgL from Legionella pneumophila.
Biochem.Biophys.Res.Commun., 529, 2020
7C51
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BU of 7c51 by Molmil
Crystal structure of a Simpl-like protein from Campylobacter jejuni (native protein)
Descriptor: SIMPL domain-containing protein
Authors:Oh, H.B, Yoon, S.I.
Deposit date:2020-05-18
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural analysis of a Simpl-like protein from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 529, 2020
2X6R
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BU of 2x6r by Molmil
Crystal structure of trehalose synthase TreT from P.horikoshi produced by soaking in trehalose
Descriptor: TREHALOSE-SYNTHASE TRET
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lim, M.-Y, Lee, S.-B, Woo, E.-J.
Deposit date:2010-02-19
Release date:2010-10-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
2XA9
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BU of 2xa9 by Molmil
Crystal structure of trehalose synthase TreT mutant E326A from P. horikoshii in complex with UDPG
Descriptor: TREHALOSE-SYNTHASE TRET, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lee, S.-B, Lim, M.-Y, Woo, E.-J.
Deposit date:2010-03-30
Release date:2011-03-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
2X6Q
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BU of 2x6q by Molmil
Crystal structure of trehalose synthase TreT from P.horikoshi
Descriptor: TREHALOSE-SYNTHASE TRET
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lim, M.-Y, Lee, S.-B, Woo, E.-J.
Deposit date:2010-02-19
Release date:2010-10-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
2XA1
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BU of 2xa1 by Molmil
Crystal structure of trehalose synthase TreT from P.horikoshii (Seleno derivative)
Descriptor: TREHALOSE-SYNTHASE TRET
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lee, S.-B, Lim, M.-Y, Woo, E.-J.
Deposit date:2010-03-26
Release date:2010-10-13
Last modified:2012-06-27
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
2XA2
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BU of 2xa2 by Molmil
Crystal structure of trehalose synthase TreT mutant E326A from P. horikoshii in complex with UDPG
Descriptor: TREHALOSE-SYNTHASE TRET, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lee, S.-B, Lim, M.-Y, Woo, E.-J.
Deposit date:2010-03-26
Release date:2011-03-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
7C50
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BU of 7c50 by Molmil
Crystal structure of a Simpl-like protein from Campylobacter jejuni (selenomethionine-incorporated protein)
Descriptor: SIMPL domain-containing protein
Authors:Oh, H.B, Yoon, S.I.
Deposit date:2020-05-18
Release date:2020-08-19
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural analysis of a Simpl-like protein from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 529, 2020
2XMP
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BU of 2xmp by Molmil
Crystal structure of trehalose synthase TreT mutant E326A from P. horishiki in complex with UDP
Descriptor: TREHALOSE-SYNTHASE TRET, URIDINE-5'-DIPHOSPHATE
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lee, S.-B, Lim, M.-Y, Woo, E.-J.
Deposit date:2010-07-29
Release date:2010-10-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
4AEF
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BU of 4aef by Molmil
THE CRYSTAL STRUCTURE OF THERMOSTABLE AMYLASE FROM THE PYROCOCCUS
Descriptor: NEOPULLULANASE (ALPHA-AMYLASE II)
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Yang, S.-J, Park, K.-H, Woo, E.-J.
Deposit date:2012-01-10
Release date:2012-10-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:A Novel Domain Arrangement in a Monomeric Cyclodextrin-Hydrolyzing Enzyme from the Hyperthermophile Pyrococcus Furiosus.
Biochim.Biophys.Acta, 1834, 2013
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221051

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