Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 128 results

7BYK
DownloadVisualize
BU of 7byk by Molmil
Crystal structure of the Legionella pneumophila LegK7 effector kinase
Descriptor: LegK7
Authors:Park, S.C, Kim, T.H, Yoon, S.I.
Deposit date:2020-04-23
Release date:2020-12-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Activation of the Legionella pneumophila LegK7 Effector Kinase by the Host MOB1 Protein.
J.Mol.Biol., 433, 2020
4NX9
DownloadVisualize
BU of 4nx9 by Molmil
Crystal structure of Pseudomonas aeruginosa flagellin FliC
Descriptor: Flagellin
Authors:Song, W.S, Yoon, S.I.
Deposit date:2013-12-09
Release date:2014-01-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of FliC flagellin from Pseudomonas aeruginosa and its implication in TLR5 binding and formation of the flagellar filament
Biochem.Biophys.Res.Commun., 444, 2014
5X12
DownloadVisualize
BU of 5x12 by Molmil
Crystal structure of Bacillus subtilis PadR
Descriptor: Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017
5IHY
DownloadVisualize
BU of 5ihy by Molmil
The crystal structure of Bacillus subtilis SeMet-YpgQ
Descriptor: NICKEL (II) ION, Uncharacterized protein
Authors:Jeon, Y.J, Song, W.S, Yoon, S.I.
Deposit date:2016-03-01
Release date:2016-04-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biochemical characterization of bacterial YpgQ protein reveals a metal-dependent nucleotide pyrophosphohydrolase
J.Struct.Biol., 195, 2016
7X1K
DownloadVisualize
BU of 7x1k by Molmil
Crystal structure of the flagellar expression regulator DegU from Listeria monocytogenes
Descriptor: Chemotaxis protein CheY
Authors:Oh, H.B, Lee, S, Yoon, S.I.
Deposit date:2022-02-24
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural and biochemical analyses of the flagellar expression regulator DegU from Listeria monocytogenes.
Sci Rep, 12, 2022
2VR5
DownloadVisualize
BU of 2vr5 by Molmil
Crystal structure of Trex from Sulfolobus Solfataricus in complex with acarbose intermediate and glucose
Descriptor: 4-O-(4,6-dideoxy-4-{[(1S,2S,3S,4R,5S)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranosyl)-beta-D-glucopyranose, GLYCEROL, GLYCOGEN OPERON PROTEIN GLGX, ...
Authors:Song, H.-N, Yoon, S.-M, Lee, S.-J, Cha, H.-J, Park, K.-H, Woo, E.-J.
Deposit date:2008-03-26
Release date:2008-07-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insight Into the Bifunctional Mechanism of the Glycogen-Debranching Enzyme Trex from the Archaeon Sulfolobus Solfataricus.
J.Biol.Chem., 283, 2008
5X14
DownloadVisualize
BU of 5x14 by Molmil
Crystal structure of Bacillus subtilis PadR in complex with ferulic acid
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, GLYCEROL, Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017
5X13
DownloadVisualize
BU of 5x13 by Molmil
Crystal structure of Bacillus subtilis PadR in complex with p-coumaric acid
Descriptor: 4'-HYDROXYCINNAMIC ACID, GLYCEROL, Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017
2XA9
DownloadVisualize
BU of 2xa9 by Molmil
Crystal structure of trehalose synthase TreT mutant E326A from P. horikoshii in complex with UDPG
Descriptor: TREHALOSE-SYNTHASE TRET, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lee, S.-B, Lim, M.-Y, Woo, E.-J.
Deposit date:2010-03-30
Release date:2011-03-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
2X6Q
DownloadVisualize
BU of 2x6q by Molmil
Crystal structure of trehalose synthase TreT from P.horikoshi
Descriptor: TREHALOSE-SYNTHASE TRET
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lim, M.-Y, Lee, S.-B, Woo, E.-J.
Deposit date:2010-02-19
Release date:2010-10-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
2XA1
DownloadVisualize
BU of 2xa1 by Molmil
Crystal structure of trehalose synthase TreT from P.horikoshii (Seleno derivative)
Descriptor: TREHALOSE-SYNTHASE TRET
Authors:Song, H.-N, Jung, T.-Y, Yoon, S.-M, Lee, S.-B, Lim, M.-Y, Woo, E.-J.
Deposit date:2010-03-26
Release date:2010-10-13
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural Insights on the New Mechanism of Trehalose Synthesis by Trehalose Synthase Tret from Pyrococcus Horikoshii.
J.Mol.Biol., 404, 2010
8YLJ
DownloadVisualize
BU of 8ylj by Molmil
Crystal structure of Pectobacterium atrosepticum PecS in complex with uric acid
Descriptor: Regulatory protein, URIC ACID
Authors:Song, W.S, Yoon, S.I.
Deposit date:2024-03-06
Release date:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of transcriptional regulation by UrtR in response to uric acid.
Nucleic Acids Res., 2024
8YLH
DownloadVisualize
BU of 8ylh by Molmil
Crystal structure of Pectobacterium atrosepticum PecS
Descriptor: CHLORIDE ION, Regulatory protein
Authors:Song, W.S, Yoon, S.I.
Deposit date:2024-03-06
Release date:2024-11-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis of transcriptional regulation by UrtR in response to uric acid.
Nucleic Acids Res., 2024
8YLI
DownloadVisualize
BU of 8yli by Molmil
Crystal structure of Pectobacterium atrosepticum PecS in complex with operator DNA
Descriptor: DNA (28-MER), Regulatory protein
Authors:Song, W.S, Yoon, S.I.
Deposit date:2024-03-06
Release date:2024-11-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of transcriptional regulation by UrtR in response to uric acid.
Nucleic Acids Res., 2024
9JQF
DownloadVisualize
BU of 9jqf by Molmil
Crystal structure of the CJ0600 protein from Campylobacter jejuni
Descriptor: 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, SULFATE ION
Authors:Ki, D.U, Choi, H.J, Song, W.S, Yoon, S.I.
Deposit date:2024-09-27
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of the CJ0600 protein from Campylobacter jejuni.
Biochem.Biophys.Res.Commun., 735, 2024
5GLF
DownloadVisualize
BU of 5glf by Molmil
Structural insights into the interaction of p97 N-terminal domain and SHP motif in Derlin-1 rhomboid pseudoprotease
Descriptor: Derlin-1, Transitional endoplasmic reticulum ATPase
Authors:Lim, J.J, Lee, Y, Yoon, S.Y, Ly, T.T, Kang, J.Y, Youn, H.-S, An, J.Y, Lee, J.-G, Park, K.R, Kim, T.G, Yang, J.K, Jun, Y, Eom, S.H.
Deposit date:2016-07-11
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural insights into the interaction of human p97 N-terminal domain and SHP motif in Derlin-1 rhomboid pseudoprotease.
FEBS Lett., 590, 2016
5Y8T
DownloadVisualize
BU of 5y8t by Molmil
Crystal structure of Bacillus subtilis PadR in complex with p-coumaric acid
Descriptor: 4'-HYDROXYCINNAMIC ACID, Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-08-21
Release date:2017-11-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR.
Nucleic Acids Res., 45, 2017
6KNT
DownloadVisualize
BU of 6knt by Molmil
Crystal structure of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis (space group P4332)
Descriptor: Putative metal-dependent hydrolase, ZINC ION
Authors:Na, H.W, Namgung, B, Song, W.S, Yoon, S.I.
Deposit date:2019-08-07
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biochemical analyses of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis.
Biochem.Biophys.Res.Commun., 519, 2019
5ZIZ
DownloadVisualize
BU of 5ziz by Molmil
Crystal structure of Xanthomonas campestris FlgL (space group H3)
Descriptor: Flagellar hook protein FlgL
Authors:Hong, H.J, Kim, T.H, Song, W.S, Yoon, S.I.
Deposit date:2018-03-18
Release date:2018-10-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of FlgL and its implications for flagellar assembly
Sci Rep, 8, 2018
7W9Z
DownloadVisualize
BU of 7w9z by Molmil
Crystal structure of Bacillus subtilis YugJ in complex with NADP and nitrate
Descriptor: Iron-containing alcohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NITRATE ION
Authors:Cho, H.Y, Nam, M.S, Hong, H.J, Song, W.S, Yoon, S.I.
Deposit date:2021-12-11
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural and Biochemical Analysis of the Furan Aldehyde Reductase YugJ from Bacillus subtilis.
Int J Mol Sci, 23, 2022
7W9Y
DownloadVisualize
BU of 7w9y by Molmil
Crystal structure of Bacillus subtilis YugJ in complex with NADP and nickel
Descriptor: Iron-containing alcohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NICKEL (II) ION
Authors:Cho, H.Y, Nam, M.S, Hong, H.J, Song, W.S, Yoon, S.I.
Deposit date:2021-12-11
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural and Biochemical Analysis of the Furan Aldehyde Reductase YugJ from Bacillus subtilis.
Int J Mol Sci, 23, 2022
7W9X
DownloadVisualize
BU of 7w9x by Molmil
Crystal structure of Bacillus subtilis YugJ in complex with nickel
Descriptor: Iron-containing alcohol dehydrogenase, NICKEL (II) ION
Authors:Cho, H.Y, Nam, M.S, Hong, H.J, Song, W.S, Yoon, S.I.
Deposit date:2021-12-11
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Structural and Biochemical Analysis of the Furan Aldehyde Reductase YugJ from Bacillus subtilis.
Int J Mol Sci, 23, 2022
5Z7B
DownloadVisualize
BU of 5z7b by Molmil
Crystal structure of the VanR transcription factor in complex with vanillate
Descriptor: 4-HYDROXY-3-METHOXYBENZOATE, PadR family transcriptional regulator
Authors:Kwak, Y.M, Park, S.C, Yoon, S.I.
Deposit date:2018-01-28
Release date:2018-08-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the VanR transcription factor and the role of its unique alpha-helix in effector recognition.
FEBS J., 285, 2018
7E92
DownloadVisualize
BU of 7e92 by Molmil
Crystal structure of the DNA-binding domain of the response regulator VbrR from Vibrio parahaemolyticus
Descriptor: DNA-binding response regulator
Authors:Cho, S.Y, Yoon, S.I.
Deposit date:2021-03-03
Release date:2021-04-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of the activation and DNA interactions of the response regulator VbrR from Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 555, 2021
5X11
DownloadVisualize
BU of 5x11 by Molmil
Crystal structure of Bacillus subtilis PadR in complex with operator DNA
Descriptor: DNA (28-MER), Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017

227561

数据于2024-11-20公开中

PDB statisticsPDBj update infoContact PDBjnumon