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PDB: 48 results

7DHQ
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Structure of Halothiobacillus neapolitanus Microcompartments Protein CsoS1D
Descriptor: Microcompartments protein
Authors:Xue, B, Tan, Y.Q, Ali, S, Robinson, R.C, Narita, A, Yew, W.S.
Deposit date:2020-11-17
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of a Minimal alpha-Carboxysome-Derived Shell and Its Utility in Enzyme Stabilization.
Biomacromolecules, 22, 2021
4PH6
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Structure of 3-Dehydroquinate Dehydratase from Enterococcus faecalis
Descriptor: 3-dehydroquinate dehydratase
Authors:Xue, B, Cheung, V.W, Yew, W.S, Robinson, R.C.
Deposit date:2014-05-05
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of Polyketide Inhibitors Targeting 3-Dehydroquinate Dehydratase in the Shikimate Pathway of Enterococcus faecalis
Plos One, 9, 2014
4YJY
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BU of 4yjy by Molmil
Crystal structure of Type III polyketide synthase from Oryza sativa
Descriptor: Chalcone synthase 1
Authors:Wongsantichon, J, Robinson, R.C, Yew, W.S.
Deposit date:2015-03-03
Release date:2016-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Synthetic Polyketide Enzymology: Platform for Biosynthesis of Antimicrobial Polyketides
Acs Catalysis, 5, 2015
7V6D
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BU of 7v6d by Molmil
Structure of lipase B from Lasiodiplodia theobromae
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lipase B
Authors:Xue, B, Zhang, H.F, Nguyen, G.K.T, Yew, W.S.
Deposit date:2021-08-20
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Novel Lipase from Lasiodiplodia theobromae Efficiently Hydrolyses C8-C10 Methyl Esters for the Preparation of Medium-Chain Triglycerides' Precursors.
Int J Mol Sci, 22, 2021
1KW1
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BU of 1kw1 by Molmil
Crystal Structure of 3-Keto-L-Gulonate 6-Phosphate Decarboxylase with bound L-gulonate 6-phosphate
Descriptor: 3-Keto-L-Gulonate 6-Phosphate Decarboxylase, L-GULURONIC ACID 6-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E, Yew, W.S, Babbitt, P.C, Gerlt, J.A, Rayment, I.
Deposit date:2002-01-28
Release date:2002-04-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Homologous (beta/alpha)8-barrel enzymes that catalyze unrelated reactions: orotidine 5'-monophosphate decarboxylase and 3-keto-L-gulonate 6-phosphate decarboxylase.
Biochemistry, 41, 2002
1KV8
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Crystal Structure of 3-Keto-L-Gulonate 6-Phosphate Decarboxylase
Descriptor: 3-Keto-L-Gulonate 6-Phosphate Decarboxylase, MAGNESIUM ION, PHOSPHATE ION
Authors:Wise, E, Yew, W.S, Babbitt, P.C, Gerlt, J.A, Rayment, I.
Deposit date:2002-01-25
Release date:2002-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Homologous (beta/alpha)8-barrel enzymes that catalyze unrelated reactions: orotidine 5'-monophosphate decarboxylase and 3-keto-L-gulonate 6-phosphate decarboxylase.
Biochemistry, 41, 2002
7CKB
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BU of 7ckb by Molmil
Simplified Alpha-Carboxysome, T=3
Descriptor: Major carboxysome shell protein 1A, Unidentified carboxysome polypeptide
Authors:Tan, Y.Q, Ali, S, Xue, B, Robinson, R.C, Narita, A, Yew, W.S.
Deposit date:2020-07-16
Release date:2021-08-25
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structure of a Minimal alpha-Carboxysome-Derived Shell and Its Utility in Enzyme Stabilization.
Biomacromolecules, 22, 2021
7CKC
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Simplified Alpha-Carboxysome, T=4
Descriptor: Major carboxysome shell protein 1A, Unidentified carboxysome polypeptide
Authors:Tan, Y.Q, Ali, S, Xue, B, Robinson, R.C, Narita, A, Yew, W.S.
Deposit date:2020-07-16
Release date:2021-08-25
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of a Minimal alpha-Carboxysome-Derived Shell and Its Utility in Enzyme Stabilization.
Biomacromolecules, 22, 2021
3CB3
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BU of 3cb3 by Molmil
Crystal structure of L-Talarate dehydratase from Polaromonas sp. JS666 complexed with Mg and L-glucarate
Descriptor: L-GLUCARIC ACID, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-21
Release date:2008-03-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of L-Talarate dehydratase from Polaromonas sp. JS666 complexed with Mg and L-glucarate.
To be Published
2DW7
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Crystal structure of D-tartrate dehydratase from Bradyrhizobium japonicum complexed with Mg++ and meso-tartrate
Descriptor: Bll6730 protein, MAGNESIUM ION, S,R MESO-TARTARIC ACID
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2006-08-07
Release date:2006-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum
Biochemistry, 45, 2006
2DW6
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Crystal structure of the mutant K184A of D-Tartrate Dehydratase from Bradyrhizobium japonicum complexed with Mg++ and D-tartrate
Descriptor: Bll6730 protein, D(-)-TARTARIC ACID, L(+)-TARTARIC ACID, ...
Authors:Fedorov, A.A, Fedorov, E.V, Yew, W.S, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2006-08-07
Release date:2006-12-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of Enzymatic Activities in the Enolase Superfamily: d-Tartrate Dehydratase from Bradyrhizobium japonicum
Biochemistry, 45, 2006
6JSU
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BU of 6jsu by Molmil
Structure of Geobacillus kaustophilus lactonase, Y99C/D266N double mutant
Descriptor: FE (III) ION, HYDROXIDE ION, Phosphotriesterase, ...
Authors:Xue, B, Yew, W.S.
Deposit date:2019-04-08
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Directed Computational Evolution of Quorum-Quenching Lactonases from the Amidohydrolase Superfamily.
Structure, 28, 2020
6JST
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Structure of Geobacillus kaustophilus lactonase, Y99P/D266N double mutant with bound 3-oxo-C8-HSL
Descriptor: 3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE, FE (III) ION, HYDROXIDE ION, ...
Authors:Xue, B, Yew, W.S.
Deposit date:2019-04-08
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.726 Å)
Cite:Directed Computational Evolution of Quorum-Quenching Lactonases from the Amidohydrolase Superfamily.
Structure, 28, 2020
6JSS
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BU of 6jss by Molmil
Structure of Geobacillus kaustophilus lactonase, Y99P mutant
Descriptor: FE (III) ION, HYDROXIDE ION, Phosphotriesterase, ...
Authors:Xue, B, Yew, W.S.
Deposit date:2019-04-08
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Directed Computational Evolution of Quorum-Quenching Lactonases from the Amidohydrolase Superfamily.
Structure, 28, 2020
1SO5
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BU of 1so5 by Molmil
Crystal structure of E112Q mutant of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-threonohydroxamate 4-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-THREONOHYDROXAMATE 4-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2004-03-12
Release date:2004-06-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Evolution of Enzymatic Activities in the Orotidine 5'-Monophosphate Decarboxylase Suprafamily: Crystallographic Evidence for a Proton Relay System in the Active Site of 3-Keto-l-gulonate 6-Phosphate Decarboxylase(,)
Biochemistry, 43, 2004
1SO4
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BU of 1so4 by Molmil
Crystal structure of K64A mutant of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-threonohydroxamate 4-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-THREONOHYDROXAMATE 4-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2004-03-12
Release date:2004-06-08
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Evolution of Enzymatic Activities in the Orotidine 5'-Monophosphate Decarboxylase Suprafamily: Crystallographic Evidence for a Proton Relay System in the Active Site of 3-Keto-l-gulonate 6-Phosphate Decarboxylase(,)
Biochemistry, 43, 2004
1SO6
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Crystal structure of E112Q/H136A double mutant of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-threonohydroxamate 4-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-THREONOHYDROXAMATE 4-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2004-03-12
Release date:2004-06-08
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Evolution of Enzymatic Activities in the Orotidine 5'-Monophosphate Decarboxylase Suprafamily: Crystallographic Evidence for a Proton Relay System in the Active Site of 3-Keto-l-gulonate 6-Phosphate Decarboxylase(,)
Biochemistry, 43, 2004
1SO3
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BU of 1so3 by Molmil
Crystal structure of H136A mutant of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-threonohydroxamate 4-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-THREONOHYDROXAMATE 4-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2004-03-12
Release date:2004-06-08
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolution of Enzymatic Activities in the Orotidine 5'-Monophosphate Decarboxylase Suprafamily: Crystallographic Evidence for a Proton Relay System in the Active Site of 3-Keto-l-gulonate 6-Phosphate Decarboxylase(,)
Biochemistry, 43, 2004
1Q6O
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BU of 1q6o by Molmil
Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-gulonaet 6-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-GULURONIC ACID 6-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.202 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
1Q6R
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Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-xylulose 5-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-XYLULOSE 5-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
1Q6L
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Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound L-threonohydroxamate 4-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-THREONOHYDROXAMATE 4-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
1Q6Q
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Structure of 3-keto-L-gulonate 6-phosphate decarboxylase with bound xylitol 5-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, L-XYLITOL 5-PHOSPHATE, MAGNESIUM ION
Authors:Wise, E.L, Yew, W.S, Gerlt, J.A, Rayment, I.
Deposit date:2003-08-13
Release date:2003-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structural Evidence for a 1,2-Enediolate Intermediate in the Reaction Catalyzed by 3-Keto-l-Gulonate 6-Phosphate Decarboxylase, a Member of the Orotidine 5'-Monophosphate Decarboxylase Suprafamily
Biochemistry, 42, 2003
7FHC
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BU of 7fhc by Molmil
Structure of prenyltransferase mutant V49W from Streptomyces sp. (strain CL190)
Descriptor: Prenyltransferase
Authors:Xue, B, Lim, K.J.H, Hartono, Y.D, Go, M.D.K, Fan, H, Yew, W.S.
Deposit date:2021-07-29
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production.
Acs Catalysis, 12, 2022
7FHB
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Structure of prenyltransferase from Streptomyces sp. (strain CL190) with bound GPP
Descriptor: GERANYL DIPHOSPHATE, Prenyltransferase
Authors:Xue, B, Lim, K.J.H, Hartono, Y.D, Go, M.D.K, Fan, H, Yew, W.S.
Deposit date:2021-07-29
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production.
Acs Catalysis, 12, 2022
7FHD
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BU of 7fhd by Molmil
Structure of prenyltransferase mutant Y288P from Streptomyces sp. (strain CL190)
Descriptor: Prenyltransferase
Authors:Xue, B, Lim, K.J.H, Hartono, Y.D, Go, M.D.K, Fan, H, Yew, W.S.
Deposit date:2021-07-29
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure-Guided Engineering of Prenyltransferase NphB for High-Yield and Regioselective Cannabinoid Production.
Acs Catalysis, 12, 2022

 

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