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PDB: 29 件
6XT7
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Tel25 Hybrid Four-quartet G-quadruplex with K+
分子名称: DNA (25-MER), MAGNESIUM ION, POTASSIUM ION, ...
著者Yatsunyk, L.A, McCarthy, S.E.
登録日2020-07-17
公開日2020-12-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献The first crystal structures of hybrid and parallel four-tetrad intramolecular G-quadruplexes.
Nucleic Acids Res., 50, 2022
7LL0
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Crystal structure of a four-tetrad, parallel, and K+ stabilized Tetrahymena thermophila telomeric G-quadruplex
分子名称: 26-mer DNA, POTASSIUM ION
著者Yatsunyk, L.A, Chen, E.V.
登録日2021-02-03
公開日2021-07-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The first crystal structures of hybrid and parallel four-tetrad intramolecular G-quadruplexes.
Nucleic Acids Res., 50, 2022
8TWH
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BU of 8twh by Molmil
Crystal structure of (GGGTT)3GGG G-quadruplex in complex with small molecule ligand RHPS4
分子名称: (GGGTT)3GGG DNA, 3,11-DIFLUORO-6,8,13-TRIMETHYL-8H-QUINO[4,3,2-KL]ACRIDIN-13-IUM, POTASSIUM ION
著者Yatsunyk, L.A, Martin, K.N, Lam, G.
登録日2023-08-21
公開日2024-09-04
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystal structure of (GGGTT)3GGG G-quadruplex in complex with small molecule ligand RHPS4
To be published
8CXF
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Crystal structure of an i-motif from the HRAS promoter region
分子名称: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, HRAS DNA
著者Yatsunyk, L.A, Li, K.S.
登録日2022-05-20
公開日2023-05-10
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal Structure of an i-Motif from the HRAS Oncogene Promoter.
Angew.Chem.Int.Ed.Engl., 62, 2023
8DHC
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Crystal structure of an i-motif from the HRAS promoter region
分子名称: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, HRAS DNA
著者Yatsunyk, L.A, Li, K.S.
登録日2022-06-27
公開日2023-05-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal Structure of an i-Motif from the HRAS Oncogene Promoter.
Angew.Chem.Int.Ed.Engl., 62, 2023
7KLP
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Crystal structure of a three-tetrad, parallel, K+ stabilized human telomeric G-quadruplex
分子名称: HEXAETHYLENE GLYCOL, POTASSIUM ION, telomeric DNA
著者Yatsunyk, L.A, Li, K.S, Chen, E.V.
登録日2020-10-30
公開日2020-12-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Water spines and networks in G-quadruplex structures.
Nucleic Acids Res., 49, 2021
6P45
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Crystal structure of the G-quadruplex formed by (TGGGT)4 in complex with N-methylmesoporphryin IX
分子名称: DNA (5'-D(P*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*T)-3'), N-METHYLMESOPORPHYRIN, POTASSIUM ION
著者Yatsunyk, L.A, Lin, L.Y.
登録日2019-05-26
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.339 Å)
主引用文献Biophysical and X-ray structural studies of the (GGGTT)3GGG G-quadruplex in complex with N-methyl mesoporphyrin IX.
Plos One, 15, 2020
6PNK
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Crystal structure of the G-quadruplex formed by (GGGTT)3GGG in complex with N-methylmesoporphryin IX
分子名称: DNA (5'-D(P*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*G)-3'), FORMIC ACID, N-METHYLMESOPORPHYRIN, ...
著者Yatsunyk, L.A, Lin, L.Y.
登録日2019-07-02
公開日2020-07-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Biophysical and X-ray structural studies of the (GGGTT)3GGG G-quadruplex in complex with N-methyl mesoporphyrin IX.
Plos One, 15, 2020
7JKU
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Crystal structure of a four-tetrad, parallel, and K+ stabilized Tetrahymena thermophila telomeric G-quadruplex
分子名称: 26-mer DNA, POTASSIUM ION
著者Yatsunyk, L.A, McCarthy, S.E, Beseiso, D, Gallagher, E.P, Chen, E.V, Miao, J.
登録日2020-07-28
公開日2021-07-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献The first crystal structures of hybrid and parallel four-tetrad intramolecular G-quadruplexes.
Nucleic Acids Res., 50, 2022
7JLH
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Structure of Centromeric Satellite III Non-canonical Duplex
分子名称: ACETATE ION, DNA AATGG, MAGNESIUM ION
著者Yatsunyk, L.A, Chen, E.V.
登録日2020-07-29
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal Structure of 4-repeat Satellite III Sequence with Non-Canonical Base Interactions
To Be Published
2PS3
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Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli
分子名称: High-affinity zinc uptake system protein znuA
著者Yatsunyk, L.A, Kim, L.R, Vorontsov, I.I, Rosenzweig, A.C.
登録日2007-05-04
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli.
J.Biol.Inorg.Chem., 13, 2008
2PRS
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BU of 2prs by Molmil
Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli
分子名称: High-affinity zinc uptake system protein znuA, ISOPROPYL ALCOHOL, ZINC ION
著者Yatsunyk, L.A, Kim, L.R, Vorontsov, I.I, Rosenzweig, A.C.
登録日2007-05-04
公開日2007-06-05
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli.
J.Biol.Inorg.Chem., 13, 2008
2PS9
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Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli
分子名称: COBALT (II) ION, High-affinity zinc uptake system protein znuA
著者Yatsunyk, L.A, Kim, L.R, Vorontsov, I.I, Rosenzweig, A.C.
登録日2007-05-04
公開日2007-06-05
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli.
J.Biol.Inorg.Chem., 13, 2008
2PS0
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Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli
分子名称: High-affinity zinc uptake system protein znuA, ZINC ION
著者Yatsunyk, L.A, Kim, L.R, Vorontsov, I.I, Rosenzweig, A.C.
登録日2007-05-04
公開日2007-06-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli.
J.Biol.Inorg.Chem., 13, 2008
8G2N
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BU of 8g2n by Molmil
Crystal structure of Tetrahymena thermophila G-rich DNA with novel ligand PyDH2
分子名称: 4,4'-{pyridine-2,6-diylbis[carbonyl-(1E)-hydrazin-2-yl-1-ylidene-(E)-methanylylidene]}bis(1-methylquinolin-1-ium), G-rich DNA, MAGNESIUM ION, ...
著者Martin, K.N, Yatsunyk, L.A.
登録日2023-02-06
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Crystal structure of Tetrahymena thermophila G-rich DNA with novel ligand PyDH2
To be published
1U96
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BU of 1u96 by Molmil
Solution Structure of Yeast Cox17 with Copper Bound
分子名称: COPPER (I) ION, Cytochrome c oxidase copper chaperone
著者Abajian, C, Yatsunyk, L.A, Ramirez, B.E, Rosenzweig, A.C.
登録日2004-08-09
公開日2004-10-05
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Yeast cox17 solution structure and Copper(I) binding.
J.Biol.Chem., 279, 2004
1U97
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Solution Structure of Apo Yeast Cox17
分子名称: Cytochrome c oxidase copper chaperone
著者Abajian, C, Yatsunyk, L.A, Ramirez, B.E, Rosenzweig, A.C.
登録日2004-08-09
公開日2004-10-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Yeast cox17 solution structure and Copper(I) binding.
J.Biol.Chem., 279, 2004
6FTU
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BU of 6ftu by Molmil
Structure of a Quadruplex forming sequence from D. discoideum
分子名称: DNA (26-MER), POTASSIUM ION
著者Guedin, A, Linda, L, Armane, S, Lacroix, L, Mergny, J.L, Thore, S, Yatsunyk, L.A.
登録日2018-02-23
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Quadruplexes in 'Dicty': crystal structure of a four-quartet G-quadruplex formed by G-rich motif found in the Dictyostelium discoideum genome.
Nucleic Acids Res., 46, 2018
8EBO
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Homopurine parallel G-quadruplex from human chromosome 7 stabilized by K+ ions
分子名称: COBALT (III) ION, DNA (5'-D(*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*AP*AP*AP*GP*GP*GP*GP*A)-3'), N-METHYLMESOPORPHYRIN, ...
著者Chen, E.V, Yatsunyk, L.A.
登録日2022-08-31
公開日2022-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Homopurine guanine-rich sequences in complex with N-methyl mesoporphyrin IX form parallel G-quadruplex dimers and display a unique symmetry tetrad.
Bioorg.Med.Chem., 77, 2022
8EDP
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Crystal structure of a three-tetrad, parallel, and K+ stabilized homopurine G-quadruplex from human chromosome 7
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*AP*GP*GP*GP*AP*AP*AP*AP*GP*GP*GP*GP*AP*GP*GP*GP*AP*AP*AP*AP*GP*GP*GP*G)-3'), N-METHYLMESOPORPHYRIN, ...
著者Ye, M, Yatsunyk, L.A.
登録日2022-09-05
公開日2022-12-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Homopurine guanine-rich sequences in complex with N-methyl mesoporphyrin IX form parallel G-quadruplex dimers and display a unique symmetry tetrad.
Bioorg.Med.Chem., 77, 2022
6W9P
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Tel26 Parallel Four-quartet G-quadruplex with K+
分子名称: DNA (5'-D(P*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*T)-3'), POTASSIUM ION, SODIUM ION
著者McCarthy, S.E, Yatsunyk, L.A, Beseiso, D, Miao, J.
登録日2020-03-23
公開日2021-03-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The first crystal structures of hybrid and parallel four-tetrad intramolecular G-quadruplexes.
Nucleic Acids Res., 50, 2022
8TAA
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Right-left hybrid parallel G-quadruplex in complex with N-methyl mesoporphyrin
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (25-MER), N-METHYLMESOPORPHYRIN, ...
著者Seth, P.C, Yatsunyk, L.A.
登録日2023-06-27
公開日2024-07-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Right-left hybrid parallel G-quadruplex in complex with N-methyl mesoporphyrin
To Be Published
2IN4
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BU of 2in4 by Molmil
Crystal Structure of Myoglobin with Charge Neutralized Heme, ZnDMb-dme
分子名称: Myoglobin, SULFATE ION, ZINC(II)-DEUTEROPORPHYRIN DIMETHYLESTER
著者Wheeler, K.E, Nocek, J.M, Cull, D.A, Yatsunyk, L.A, Rosenzweig, A.C, Hoffman, B.M.
登録日2006-10-05
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Dynamic docking of cytochrome b5 with myoglobin and alpha-hemoglobin: heme-neutralization "squares" and the binding of electron-transfer-reactive configurations.
J.Am.Chem.Soc., 129, 2007
8D78
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Crystal structure of a Ba stabilized four-tetrad, parallel Tetrahymena thermophila telomeric G-quadruplex in complex with N-methyl mesoporphyrin IX
分子名称: BARIUM ION, DNA (5'-D(*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*G)-3'), N-METHYLMESOPORPHYRIN
著者Chen, E.V, Beseiso, D, Yatsunyk, L.A.
登録日2022-06-07
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Biophysical and structural characterization of telomeric G-quadruplexes from Tetrahymena thermophila in complex with N-Methyl Mesoporphyrin IX
To Be Published
8D79
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Crystal structure of a four-tetrad, parallel, and Na+ stabilized Tetrahymena thermophila telomeric G-quadruplex in complex with N-methyl mesoporphyrin IX
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*TP*TP*GP*GP*GP*GP*T)-3'), N-METHYLMESOPORPHYRIN, ...
著者Chen, E.V, Beseiso, D, Yatsunyk, L.A.
登録日2022-06-07
公開日2023-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Biophysical and structural characterization of telomeric G-quadruplexes from Tetrahymena thermophila in complex with N-Methyl Mesoporphyrin IX
To Be Published

 

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件を2024-11-06に公開中

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