1UKU
| Crystal Structure of Pyrococcus horikoshii CutA1 Complexed with Cu2+ | Descriptor: | COPPER (II) ION, periplasmic divalent cation tolerance protein CutA | Authors: | Tanaka, Y, Yasutake, Y, Yao, M, Sakai, N, Tanaka, I, Tsumoto, K, Kumagai, I. | Deposit date: | 2003-09-01 | Release date: | 2004-01-13 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Structural implications for heavy metal-induced reversible assembly and aggregation of a protein: the case of Pyrococcus horikoshii CutA. Febs Lett., 556, 2004
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1VAJ
| Crystal Structure of Uncharacterized Protein PH0010 From Pyrococcus horikoshii | Descriptor: | Hypothetical protein PH0010 | Authors: | Tajika, Y, Sakai, N, Tamura, T, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2004-02-17 | Release date: | 2005-01-25 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | Crystal structure of PH0010 from Pyrococcus horikoshii, which is highly homologous to human AMMECR 1C-terminal region Proteins, 58, 2005
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1ULY
| Crystal structure analysis of the ArsR homologue DNA-binding protein from P. horikoshii OT3 | Descriptor: | hypothetical protein PH1932 | Authors: | Itou, H, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2003-09-17 | Release date: | 2004-10-19 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal structure of the PH1932 protein, a unique archaeal ArsR type winged-HTH transcription factor from Pyrococcus horikoshii OT3 Proteins, 70, 2008
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1V30
| Crystal Structure Of Uncharacterized Protein PH0828 From Pyrococcus horikoshii | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Hypothetical UPF0131 protein PH0828 | Authors: | Tajika, Y, Sakai, N, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2003-10-21 | Release date: | 2004-11-09 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Crystal structure of hypothetical protein PH0828 from Pyrococcus horikoshii. Proteins, 57, 2004
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1V43
| Crystal Structure of ATPase subunit of ABC Sugar Transporter | Descriptor: | sugar-binding transport ATP-binding protein | Authors: | Ose, T, Fujie, T, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2003-11-08 | Release date: | 2004-11-16 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3 Proteins, 57, 2004
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8H25
| Lacticaseibacillus casei GH35 beta-galactosidase LBCZ_0230 | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-galactosidase, DI(HYDROXYETHYL)ETHER, ... | Authors: | Saburi, W, Ota, T, Kato, K, Tagami, T, Yamashita, K, Yao, M, Mori, H. | Deposit date: | 2022-10-04 | Release date: | 2023-08-16 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.295 Å) | Cite: | Function and Structure of Lacticaseibacillus casei GH35 beta-Galactosidase LBCZ_0230 with High Hydrolytic Activity to Lacto- N -biose I and Galacto- N -biose. J Appl Glycosci (1999), 70, 2023
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1VE0
| Crystal structure of uncharacterized protein ST2072 from Sulfolobus tokodaii | Descriptor: | SULFATE ION, ZINC ION, hypothetical protein (ST2072) | Authors: | Tanabe, E, Horiike, Y, Tsumoto, K, Yasutake, Y, Yao, M, Tanaka, I, Kumagai, I. | Deposit date: | 2004-03-26 | Release date: | 2005-03-22 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structure of the uncharacterized protein ST2072 from Sulfolobus tokodaii To be Published
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6KBI
| Crystal structure of ErbB3 N418Q mutant | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-3 | Authors: | Kato, K, Yao, M. | Deposit date: | 2019-06-25 | Release date: | 2020-07-01 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Crystal structure of ErbB3 N418Q mutant To Be Published
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1VCI
| Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3 complexed with ATP | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, sugar-binding transport ATP-binding protein | Authors: | Ose, T, Fujie, T, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2004-03-08 | Release date: | 2004-12-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3 Proteins, 57, 2004
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1VDZ
| Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3 | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, A-type ATPase subunit A | Authors: | Maegawa, Y, Morita, H, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2004-03-26 | Release date: | 2005-06-21 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.55 Å) | Cite: | Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3 To be Published
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1VGG
| Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8 | Descriptor: | Conserved Hypothetical Protein TT1634 (TTHA1091) | Authors: | Satoh, S, Yao, M, Kousumi, Y, Ebihara, A, Matsumoto, K, Okamoto, A, Tanaka, I, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-04-26 | Release date: | 2004-10-26 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Crystal Structure of the Conserved Hypothetical Protein TT1634 from Thermus Thermophilus HB8 To be Published
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8HRH
| SN-131/1B2 anti-MUC1 antibody with a glycopeptide | Descriptor: | 1-ACETYL-L-PROLINE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ALANINE, ... | Authors: | Wakui, H, Horidome, C, Yao, M, Ose, T, Nishimura, S.-I. | Deposit date: | 2022-12-15 | Release date: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.07 Å) | Cite: | Structural and molecular insight into antibody recognition of dynamic neoepitopes in membrane tethered MUC1 of pancreatic cancer cells and secreted exosomes. Rsc Chem Biol, 4, 2023
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4I86
| Crystal structure of PilZ domain of CeSA from cellulose synthesizing bacterium | Descriptor: | Cellulose synthase 1 | Authors: | Fujiwara, T, Komoda, K, Sakurai, N, Tanaka, I, Yao, M. | Deposit date: | 2012-12-03 | Release date: | 2013-04-03 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.098 Å) | Cite: | The c-di-GMP recognition mechanism of the PilZ domain of bacterial cellulose synthase subunit A Biochem.Biophys.Res.Commun., 431, 2013
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1WU7
| Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum | Descriptor: | Histidyl-tRNA synthetase | Authors: | Tanaka, Y, Sakai, N, Yao, M, Watanabe, N, Tamura, T, Tanaka, I. | Deposit date: | 2004-12-01 | Release date: | 2005-12-06 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum To be Published
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1WJ9
| Crystal structure of a CRISPR-associated protein from thermus thermophilus | Descriptor: | CRISPR-associated protein | Authors: | Ebihara, A, Yao, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-29 | Release date: | 2004-11-29 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domain Protein Sci., 15, 2006
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1WY7
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8IBK
| Crystal structure of Bacillus sp. AHU2216 GH13_31 Alpha-glucosidase E256Q/N258G in complex with maltotriose | Descriptor: | Alpha-glucosidase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | Authors: | Auiewiriyanukul, W, Saburi, W, Yu, J, Kato, K, Yao, M, Mori, H. | Deposit date: | 2023-02-10 | Release date: | 2023-05-03 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.69 Å) | Cite: | Alteration of Substrate Specificity and Transglucosylation Activity of GH13_31 alpha-Glucosidase from Bacillus sp. AHU2216 through Site-Directed Mutagenesis of Asn258 on beta → alpha Loop 5. Molecules, 28, 2023
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8IDS
| Crystal structure of Bacillus sp. AHU2216 GH13_31 Alpha-glucosidase E256Q/N258P in complex with maltotriose | Descriptor: | Alpha-glucosidase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | Authors: | Auiewiriyanukul, W, Saburi, W, Yu, J, Kato, K, Yao, M, Mori, H. | Deposit date: | 2023-02-14 | Release date: | 2023-05-03 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Alteration of Substrate Specificity and Transglucosylation Activity of GH13_31 alpha-Glucosidase from Bacillus sp. AHU2216 through Site-Directed Mutagenesis of Asn258 on beta → alpha Loop 5. Molecules, 28, 2023
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1WSC
| Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii | Descriptor: | Hypothetical protein ST0229 | Authors: | Murayama, T, Tanaka, Y, Sasaki, T, Yasutake, Y, Yao, M, Tsumoto, K, Tanaka, I, Kumagai, I. | Deposit date: | 2004-11-05 | Release date: | 2005-11-08 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.45 Å) | Cite: | Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii To be Published
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1WJG
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1WOZ
| Crystal structure of uncharacterized protein ST1454 from Sulfolobus tokodaii | Descriptor: | (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, 177aa long conserved hypothetical protein (ST1454) | Authors: | Sasaki, T, Tanaka, Y, Yasutake, Y, Yao, M, Tanaka, I, Tsumoto, K, Kumagai, I. | Deposit date: | 2004-08-27 | Release date: | 2005-10-04 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.94 Å) | Cite: | Crystal structure of the uncharacterized protein ST1454 from Sulfolobus tokodaii. To be Published
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8IMZ
| Cryo-EM structure of mouse Piezo1-MDFIC complex (composite map) | Descriptor: | MyoD family inhibitor domain-containing protein, Piezo-type mechanosensitive ion channel component 1 | Authors: | Zhou, Z, Ma, X, Lin, Y, Cheng, D, Bavi, N, Li, J.V, Sutton, D, Yao, M, Harvey, N, Corry, B, Zhang, Y, Cox, C.D. | Deposit date: | 2023-03-07 | Release date: | 2023-08-09 | Last modified: | 2023-08-30 | Method: | ELECTRON MICROSCOPY (3.66 Å) | Cite: | MyoD-family inhibitor proteins act as auxiliary subunits of Piezo channels. Science, 381, 2023
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6LZH
| Crystal structure of Alpha/beta hydrolase GrgF from Penicillium sp. sh18 | Descriptor: | GrgF, SODIUM ION | Authors: | Wang, H, Yu, J, Wang, W.G, Matsuda, Y, Yao, M. | Deposit date: | 2020-02-19 | Release date: | 2020-06-24 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Molecular Basis for the Biosynthesis of an Unusual Chain-Fused Polyketide, Gregatin A. J.Am.Chem.Soc., 142, 2020
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2D6Y
| Crystal Structure of transcriptional factor SCO4008 from Streptomyces coelicolor A3(2) | Descriptor: | L(+)-TARTARIC ACID, putative tetR family regulatory protein | Authors: | Hayashi, T, Tanaka, Y, Sakai, N, Yao, M, Tamura, T, Tanaka, I. | Deposit date: | 2005-11-15 | Release date: | 2006-10-31 | Last modified: | 2013-09-04 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | SCO4008, a Putative TetR Transcriptional Repressor from Streptomyces coelicolor A3(2), Regulates Transcription of sco4007 by Multidrug Recognition. J.Mol.Biol., 425, 2013
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2D5V
| Crystal structure of HNF-6alpha DNA-binding domain in complex with the TTR promoter | Descriptor: | 5'-D(*AP*TP*TP*AP*TP*TP*GP*AP*CP*TP*TP*AP*GP*A)-3', 5'-D(*TP*CP*TP*AP*AP*GP*TP*CP*AP*AP*TP*AP*AP*T)-3', ACETATE ION, ... | Authors: | Iyaguchi, D, Yao, M, Watanabe, N, Nishihira, J, Tanaka, I. | Deposit date: | 2005-11-07 | Release date: | 2006-12-05 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | DNA recognition mechanism of the ONECUT homeodomain of transcription factor HNF-6 Structure, 15, 2007
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