1F2D
 
 | | 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE | | 分子名称: | 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION | | 著者 | Yao, M, Ose, T, Sugimoto, H, Horiuchi, A, Nakagawa, A, Yokoi, D, Murakami, T, Honma, M, Wakatsuki, S, Tanaka, I. | | 登録日 | 2000-05-24 | | 公開日 | 2000-12-20 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of 1-aminocyclopropane-1-carboxylate deaminase from Hansenula saturnus.
J.Biol.Chem., 275, 2000
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1IZ6
 | | Crystal Structure of Translation Initiation Factor 5A from Pyrococcus Horikoshii | | 分子名称: | Initiation Factor 5A | | 著者 | Yao, M, Ohsawa, A, Kikukawa, S, Tanaka, I, Kimura, M. | | 登録日 | 2002-09-25 | | 公開日 | 2003-01-28 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal Structure of Hyperthermophilic Archaeal Initiation Factor 5A: A Homologue of Eukaryotic Initiation Factor 5A (eIF-5A)
J.BIOCHEM.(TOKYO), 133, 2003
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1V7L
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1VGJ
 | | Crystal structure of 2'-5' RNA ligase from Pyrococcus horikoshii | | 分子名称: | Hypothetical protein PH0099 | | 著者 | Yao, M, Morita, H, Okada, A, Tanaka, I. | | 登録日 | 2004-04-27 | | 公開日 | 2005-06-07 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | | 主引用文献 | The structure of Pyrococcus horikoshii 2'-5' RNA ligase at 1.94 A resolution reveals a possible open form with a wider active-site cleft
ACTA CRYSTALLOGR.,SECT.F, 62, 2006
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2ZQ0
 | | Crystal structure of SusB complexed with acarbose | | 分子名称: | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glucosidase (Alpha-glucosidase SusB), CALCIUM ION | | 著者 | Yao, M, Tanaka, I, Kitamura, M. | | 登録日 | 2008-07-31 | | 公開日 | 2008-10-28 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Structural and functional analysis of a glycoside hydrolase family 97 enzyme from Bacteroides thetaiotaomicron.
J.Biol.Chem., 283, 2008
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3W6V
 | | Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA | | 分子名称: | AdpA, DNA (5'-D(*AP*GP*GP*TP*TP*GP*GP*CP*GP*GP*GP*TP*TP*CP*AP*C)-3'), DNA (5'-D(*CP*TP*GP*TP*GP*AP*AP*CP*CP*CP*GP*CP*CP*AP*AP*C)-3') | | 著者 | Yao, M.D, Ohtsuka, J, Nagata, K, Miyazono, K, Ohnishi, Y, Tanokura, M. | | 登録日 | 2013-02-22 | | 公開日 | 2013-09-18 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | | 主引用文献 | Complex Structure of the DNA-binding Domain of AdpA, the Global Transcription Factor in Streptomyces griseus, and a Target Duplex DNA Reveals the Structural Basis of Its Tolerant DNA Sequence Specificity
J.Biol.Chem., 288, 2013
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1WLS
 | | Crystal structure of L-asparaginase I homologue protein from Pyrococcus horikoshii | | 分子名称: | L-asparaginase | | 著者 | Yao, M, Morita, H, Yasutake, Y, Tanaka, I. | | 登録日 | 2004-06-29 | | 公開日 | 2005-03-15 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (2.16 Å) | | 主引用文献 | Structure of the type I L-asparaginase from the hyperthermophilic archaeon Pyrococcus horikoshii at 2.16 angstroms resolution.
Acta Crystallogr.,Sect.D, 61, 2005
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4V60
 | | The structure of rat liver vault at 3.5 angstrom resolution | | 分子名称: | Major vault protein | | 著者 | Kato, K, Zhou, Y, Tanaka, H, Yao, M, Yamashita, E, Yoshimura, M, Tsukihara, T. | | 登録日 | 2008-10-24 | | 公開日 | 2014-07-09 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | | 主引用文献 | The structure of rat liver vault at 3.5 angstrom resolution
Science, 323, 2009
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3AZV
 | | Crystal structure of the receptor binding domain | | 分子名称: | D/C mosaic neurotoxin, SULFATE ION | | 著者 | Nuemket, N, Tanaka, Y, Tsukamoto, K, Tsuji, T, Nakamura, K, Kozaki, S, Yao, M, Tanaka, I. | | 登録日 | 2011-06-02 | | 公開日 | 2011-12-28 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (3.1 Å) | | 主引用文献 | Structural and mutational analyses of the receptor binding domain of botulinum D/C mosaic neurotoxin: insight into the ganglioside binding mechanism
Biochem.Biophys.Res.Commun., 411, 2011
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3AZW
 | | Crystal structure of the receptor binding domain | | 分子名称: | D/C mosaic neurotoxin, SULFATE ION | | 著者 | Nuemket, N, Tanaka, Y, Tsukamoto, K, Tsuji, T, Nakamura, K, Kozaki, S, Yao, M, Tanaka, I. | | 登録日 | 2011-06-02 | | 公開日 | 2011-12-28 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.99 Å) | | 主引用文献 | Structural and mutational analyses of the receptor binding domain of botulinum D/C mosaic neurotoxin: insight into the ganglioside binding mechanism
Biochem.Biophys.Res.Commun., 411, 2011
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1QQY
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8J09
 | | Crystal structure of protein 3745 | | 分子名称: | Cell division control protein 45, DNA replication regulator SLD3 | | 著者 | Li, H, Yao, M. | | 登録日 | 2023-04-10 | | 公開日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.61 Å) | | 主引用文献 | Structural and functional insights into a process of complex formation by 3745
To Be Published
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8JHH
 | | Glycoside hydrolase family 55 endo-beta-1,3-glucanase from Microdochium nivale | | 分子名称: | GLYCEROL, MnLam55A | | 著者 | Ota, T, Saburi, W, Yamashita, K, Tagami, T, Yu, J, Komba, S, Jewell, L.E, Hsiang, T, Imai, R, Yao, M, Mori, H. | | 登録日 | 2023-05-23 | | 公開日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Molecular mechanism for endo-type action of glycoside hydrolase family 55 endo-beta-1,3-glucanase on beta 1-3/1-6-glucan.
J.Biol.Chem., 299, 2023
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7C21
 | | Crystal structure of Duvenhage virus phosphoprotein C-terminal domain | | 分子名称: | Phosphoprotein | | 著者 | Sugiyama, A, Jiang, X, Maenaka, K, Yao, M, Ose, T. | | 登録日 | 2020-05-06 | | 公開日 | 2021-03-17 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Structural comparison of the C-terminal domain of functionally divergent lyssavirus P proteins.
Biochem.Biophys.Res.Commun., 529, 2020
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6LIV
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8YIF
 | | Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarviosin | | 分子名称: | Acarviosin, Alpha-glucosidase | | 著者 | Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H. | | 登録日 | 2024-02-29 | | 公開日 | 2024-07-03 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024
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8YIE
 | | Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarbose | | 分子名称: | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glucosidase | | 著者 | Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H. | | 登録日 | 2024-02-29 | | 公開日 | 2024-07-03 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024
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4DWQ
 | | RNA ligase RtcB-GMP/Mn(2+) complex | | 分子名称: | GLYCEROL, GUANOSINE-5'-MONOPHOSPHATE, MALONATE ION, ... | | 著者 | Okada, C, Xia, S, Englert, M, Yao, M, Soll, D, Wang, J. | | 登録日 | 2012-02-26 | | 公開日 | 2012-09-05 | | 最終更新日 | 2017-08-02 | | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | | 主引用文献 | Structural and mechanistic insights into guanylylation of RNA-splicing ligase RtcB joining RNA between 3'-terminal phosphate and 5'-OH.
Proc.Natl.Acad.Sci.USA, 109, 2012
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4WLC
 | | Structure of dextran glucosidase with glucose | | 分子名称: | CALCIUM ION, GLYCEROL, Glucan 1,6-alpha-glucosidase, ... | | 著者 | Kobayashi, M, Kato, K, Yao, M. | | 登録日 | 2014-10-07 | | 公開日 | 2015-08-26 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (2.402 Å) | | 主引用文献 | Structural insights into the catalytic reaction that is involved in the reorientation of Trp238 at the substrate-binding site in GH13 dextran glucosidase
Febs Lett., 589, 2015
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4XB3
 | | Structure of dextran glucosidase | | 分子名称: | CALCIUM ION, Glucan 1,6-alpha-glucosidase, HEXAETHYLENE GLYCOL | | 著者 | Kobayashi, M, Kato, K, Yao, M. | | 登録日 | 2014-12-16 | | 公開日 | 2015-08-26 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.093 Å) | | 主引用文献 | Structural insights into the catalytic reaction that is involved in the reorientation of Trp238 at the substrate-binding site in GH13 dextran glucosidase
Febs Lett., 589, 2015
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4WJ3
 | | Crystal structure of the asparagine transamidosome from Pseudomonas aeruginosa | | 分子名称: | 76mer-tRNA, Aspartate--tRNA(Asp/Asn) ligase, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, ... | | 著者 | Suzuki, T, Nakamura, A, Kato, K, Tanaka, I, Yao, M. | | 登録日 | 2014-09-29 | | 公開日 | 2014-12-31 | | 最終更新日 | 2024-10-09 | | 実験手法 | X-RAY DIFFRACTION (3.705 Å) | | 主引用文献 | Structure of the Pseudomonas aeruginosa transamidosome reveals unique aspects of bacterial tRNA-dependent asparagine biosynthesis
Proc.Natl.Acad.Sci.USA, 112, 2015
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6KBI
 | | Crystal structure of ErbB3 N418Q mutant | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor tyrosine-protein kinase erbB-3 | | 著者 | Kato, K, Yao, M. | | 登録日 | 2019-06-25 | | 公開日 | 2020-07-01 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (3 Å) | | 主引用文献 | Crystal structure of ErbB3 N418Q mutant
To Be Published
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4WJ4
 | | Crystal structure of non-discriminating aspartyl-tRNA synthetase from Pseudomonas aeruginosa complexed with tRNA(Asn) and aspartic acid | | 分子名称: | 76mer-tRNA, ASPARTIC ACID, Aspartate--tRNA(Asp/Asn) ligase | | 著者 | Suzuki, T, Nakamura, A, Kato, K, Tanaka, I, Yao, M. | | 登録日 | 2014-09-29 | | 公開日 | 2014-12-31 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (3.294 Å) | | 主引用文献 | Structure of the Pseudomonas aeruginosa transamidosome reveals unique aspects of bacterial tRNA-dependent asparagine biosynthesis
Proc.Natl.Acad.Sci.USA, 112, 2015
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4XD9
 | | Structure of Rpf2-Rrs1 complex involved in ribosome biogenesis | | 分子名称: | Ribosome biogenesis protein (Rrs1), putative (AFU_orthologue AFUA_7G04430), Ribosome biogenesis protein, ... | | 著者 | Asano, N, Kato, K, Yao, M. | | 登録日 | 2014-12-19 | | 公開日 | 2015-06-10 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | | 主引用文献 | Structural and functional analysis of the Rpf2-Rrs1 complex in ribosome biogenesis.
Nucleic Acids Res., 43, 2015
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6LIU
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