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PDB: 299 件

4NOO
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Molecular mechanism for self-protection against type VI secretion system in Vibrio cholerae
分子名称: Putative uncharacterized protein, VgrG protein
著者Yang, X, Xu, M, Jiang, T, Fan, Z.
登録日2013-11-20
公開日2014-04-09
最終更新日2014-04-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular mechanism for self-protection against the type VI secretion system in Vibrio cholerae.
Acta Crystallogr.,Sect.D, 70, 2014
7W8N
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BU of 7w8n by Molmil
Microbial Hormone-sensitive lipase E53 wild type
分子名称: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
著者Yang, X, Li, Z, Xu, X, Li, J.
登録日2021-12-08
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mechanism and Structural Insights Into a Novel Esterase, E53, Isolated From Erythrobacter longus .
Front Microbiol, 12, 2021
5YTX
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BU of 5ytx by Molmil
Crystal structure of YB1 cold-shock domain in complex with UCAACU
分子名称: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*UP*CP*AP*AP*CP*U)-3')
著者Yang, X, Huang, Y.
登録日2017-11-20
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.
J.Biol.Chem., 294, 2019
5YTT
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BU of 5ytt by Molmil
Crystal structure of YB1 cold-shock domain in complex with UCAUGU
分子名称: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*UP*CP*AP*UP*GP*U)-3'), SULFATE ION
著者Yang, X, Huang, Y.
登録日2017-11-20
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.
J.Biol.Chem., 294, 2019
5YTS
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BU of 5yts by Molmil
Crystal structure of YB1 cold-shock domain in complex with UCUUCU
分子名称: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*CP*UP*UP*C)-3'), SULFATE ION
著者Yang, X, Huang, Y.
登録日2017-11-20
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.
J.Biol.Chem., 294, 2019
5YTV
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BU of 5ytv by Molmil
Crystal structure of YB1 cold-shock domain in complex with UCAUCU
分子名称: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*UP*CP*AP*UP*CP*U)-3')
著者Yang, X, Huang, Y.
登録日2017-11-20
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA.
J.Biol.Chem., 294, 2019
1AQZ
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BU of 1aqz by Molmil
CRYSTAL STRUCTURE OF A HIGHLY SPECIFIC ASPERGILLUS RIBOTOXIN, RESTRICTOCIN
分子名称: PHOSPHATE ION, RESTRICTOCIN
著者Yang, X, Moffat, K.
登録日1997-08-04
公開日1997-11-12
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Insights into specificity of cleavage and mechanism of cell entry from the crystal structure of the highly specific Aspergillus ribotoxin, restrictocin.
Structure, 4, 1996
7TR4
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BU of 7tr4 by Molmil
MA2-MART1-HLAA0201
分子名称: Beta-2-microglobulin, GLYCEROL, HLA-A*02:01, ...
著者Yang, X, Jude, K.M, Garcia, K.C.
登録日2022-01-27
公開日2022-11-23
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Facile repurposing of peptide-MHC-restricted antibodies for cancer immunotherapy.
Nat.Biotechnol., 41, 2023
6KF5
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BU of 6kf5 by Molmil
Microbial Hormone-sensitive lipase E53 mutant I256L
分子名称: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, GLYCEROL, ...
著者Yang, X, Li, Z.Y, Li, J, Xu, X.W.
登録日2019-07-06
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Microbial Hormone-sensitive lipase E53 mutant I256L
To Be Published
5TUW
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BU of 5tuw by Molmil
Crystal structure of Orange Carotenoid Protein with partial loss of 3'OH Echinenone chromophore
分子名称: (3'R)-3'-hydroxy-beta,beta-caroten-4-one, GLYCEROL, Orange carotenoid-binding protein
著者Yang, X, Bandara, S, Ren, Z.
登録日2016-11-07
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Photoactivation mechanism of a carotenoid-based photoreceptor.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TV0
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BU of 5tv0 by Molmil
crystal structure and light induced structural changes in orange carotenoid protein bound with 3 'OH echinenone
分子名称: (3'R)-3'-hydroxy-beta,beta-caroten-4-one, GLYCEROL, Orange carotenoid-binding protein
著者Yang, X, Bandara, S, Ren, Z.
登録日2016-11-07
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.648 Å)
主引用文献Photoactivation mechanism of a carotenoid-based photoreceptor.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TUX
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BU of 5tux by Molmil
crystal structure and light induced structural changes in orange carotenoid protein bound with echinenone
分子名称: GLYCEROL, Orange carotenoid-binding protein, beta,beta-caroten-4-one
著者Yang, X, Bandara, S, Ren, Z.
登録日2016-11-07
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Photoactivation mechanism of a carotenoid-based photoreceptor.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7VO0
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BU of 7vo0 by Molmil
Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (trimer of dimers)
分子名称: DNA_NT (84-MER), DNA_T (84-MER), Putative metal uptake regulation protein, ...
著者Yang, X, Zheng, J.
登録日2021-10-12
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VPD
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BU of 7vpd by Molmil
Cryo-EM structure of Streptomyces coelicolor RNAP-promoter open complex with one Zur dimers
分子名称: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Yang, X, Zheng, J.
登録日2021-10-15
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VPZ
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BU of 7vpz by Molmil
Cryo-EM structure of Streptomyces coelicolor transcription initial complex with one Zur dimer
分子名称: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Yang, X, Zheng, J.
登録日2021-10-18
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7VO9
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BU of 7vo9 by Molmil
Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (dimer of dimers)
分子名称: DNA (84-MER), Putative metal uptake regulation protein, ZINC ION
著者Yang, X, Zheng, J.
登録日2021-10-13
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
3IBR
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BU of 3ibr by Molmil
Crystal Structure of P. aeruginosa Bacteriophytochrome Photosensory Core Module Mutant Q188L in the Mixed Pr/Pfr State
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Yang, X, Kuk, J, Moffat, K.
登録日2009-07-16
公開日2009-09-22
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome.
Proc.Natl.Acad.Sci.USA, 106, 2009
7WLT
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BU of 7wlt by Molmil
the Curved Structure of mPIEZO1 in Lipid Bilayer
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, ...
著者Yang, X, Lin, C, Chen, X, Li, S, Li, X, Xiao, B.
登録日2022-01-13
公開日2022-04-13
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Structure deformation and curvature sensing of PIEZO1 in lipid membranes.
Nature, 604, 2022
7WLU
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BU of 7wlu by Molmil
The Flattened Structure of mPIEZO1 in Lipid Bilayer
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, Piezo-type mechanosensitive ion channel component 1
著者Yang, X, Lin, C, Chen, X, Li, S, Li, X, Xiao, B.
登録日2022-01-13
公開日2022-04-13
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (6.81 Å)
主引用文献Structure deformation and curvature sensing of PIEZO1 in lipid membranes.
Nature, 604, 2022
5TEZ
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BU of 5tez by Molmil
TCR F50 recgonizing M1-HLA-A2
分子名称: Beta-2-microglobulin, GLY-ILE-LEU-GLY-PHE-VAL-PHE-THR-LEU, HLA class I histocompatibility antigen, ...
著者Yang, X, Mariuzza, R.A.
登録日2016-09-23
公開日2017-09-27
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for clonal diversity of the human T-cell response to a dominant influenza virus epitope.
J. Biol. Chem., 292, 2017
7CI0
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BU of 7ci0 by Molmil
Microbial Hormone-sensitive lipase E53 mutant S162A
分子名称: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Yang, X, Li, Z, Xu, X, Li, J.
登録日2020-07-06
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanism and Structural Insights Into a Novel Esterase, E53, Isolated From Erythrobacter longus .
Front Microbiol, 12, 2021
7CIH
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BU of 7cih by Molmil
Microbial Hormone-sensitive lipase E53 mutant S285G
分子名称: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
著者Yang, X, Li, Z, Xu, X, Li, J.
登録日2020-07-07
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.789 Å)
主引用文献Mechanism and Structural Insights Into a Novel Esterase, E53, Isolated From Erythrobacter longus .
Front Microbiol, 12, 2021
8YL5
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BU of 8yl5 by Molmil
The DSR2-DSAD1 complex with DSAD1 on the same sides
分子名称: DSAD1, SIR2-like domain-containing protein
著者Yang, X, Zheng, J.
登録日2024-03-05
公開日2024-08-14
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
7XRW
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BU of 7xrw by Molmil
Solution structure of T. brucei RAP1
分子名称: Repressor activator protein 1
著者Yang, X, Pan, X.H, Ji, Z.Y, Wong, K.B, Zhang, M.J, Zhao, Y.X.
登録日2022-05-12
公開日2023-03-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The RRM-mediated RNA binding activity in T. brucei RAP1 is essential for VSG monoallelic expression.
Nat Commun, 14, 2023
7W6V
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BU of 7w6v by Molmil
Crystal structure of a dicobalt-substituted small laccase at 2.47 angstrom
分子名称: COBALT (II) ION, Putative copper oxidase
著者Yang, X, Wu, F, Wu, W, Chen, X, Fan, S, Yu, P, Mao, L.
登録日2021-12-02
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献A versatile artificial metalloenzyme scaffold enabling direct bioelectrocatalysis in solution.
Sci Adv, 8, 2022

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