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PDB: 235 results
8P5X
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BU of 8p5x by Molmil
Single particle cryo-EM structure of the complex between Corynebacterium glutamicum homohexameric 2-oxoglutarate dehydrogenase OdhA and the FHA-protein inhibitor OdhI
Descriptor: 2-oxoglutarate dehydrogenase E1/E2 component, MAGNESIUM ION, Oxoglutarate dehydrogenase inhibitor, ...
Authors:Yang, L, Mechaly, A.M, Bellinzoni, M.
Deposit date:2023-05-24
Release date:2023-08-16
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:High resolution cryo-EM and crystallographic snapshots of the actinobacterial two-in-one 2-oxoglutarate dehydrogenase.
Nat Commun, 14, 2023
8P5W
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BU of 8p5w by Molmil
Single particle cryo-EM structure of homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum following reaction with the 2-oxoglutarate analogue succinyl phosphonate
Descriptor: (4~{S})-4-[(2~{R})-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl(phosphonooxy)phosphoryl]oxyethyl]-2~{H}-1,3-thiazol-2-yl]-4-oxidanyl-4-phosphono-butanoic acid, 2-oxoglutarate dehydrogenase E1/E2 component, ACETYL COENZYME *A, ...
Authors:Yang, L, Mechaly, A.M, Bellinzoni, M.
Deposit date:2023-05-24
Release date:2023-08-16
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:High resolution cryo-EM and crystallographic snapshots of the actinobacterial two-in-one 2-oxoglutarate dehydrogenase.
Nat Commun, 14, 2023
8GYY
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BU of 8gyy by Molmil
Bifunctional xylosidase/glucosidase LXYL with intermediate substrate xylose, 120 seconds
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yang, L.Y.
Deposit date:2022-09-24
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Bifunctional xylosidase/glucosidase LXYL with intermediate substrate xylose
To Be Published
8P5S
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BU of 8p5s by Molmil
Crystal structure of the homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum
Descriptor: 2-oxoglutarate dehydrogenase E1/E2 component, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETYL COENZYME *A, ...
Authors:Yang, L, Boyko, A, Bellinzoni, M.
Deposit date:2023-05-24
Release date:2023-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.459 Å)
Cite:High resolution cryo-EM and crystallographic snapshots of the actinobacterial two-in-one 2-oxoglutarate dehydrogenase.
Nat Commun, 14, 2023
3MSY
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BU of 3msy by Molmil
Crystal Structure of Mandelate racemase/muconate lactonizing enzyme from a Marine actinobacterium
Descriptor: Mandelate racemase/muconate lactonizing enzyme
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-04-29
Release date:2010-06-30
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Mandelate racemase/muconate lactonizing enzyme from a Marine actinobacterium
To be Published
3NO1
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BU of 3no1 by Molmil
Crystal Structure of Mandelate racemase/muconate lactonizing enzyme from a Marine actinobacterium in complex with magnesium
Descriptor: MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-06-24
Release date:2010-07-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal Structure of Mandelate racemase/muconate lactonizing enzyme from a Marine actinobacterium in complex with magnesium
To be Published
3HP0
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BU of 3hp0 by Molmil
Crystal structure of a Putative polyketide biosynthesis enoyl-CoA hydratase (pksH) from Bacillus subtilis
Descriptor: Putative polyketide biosynthesis enoyl-CoA hydratase homolog pksH
Authors:Satyanarayana, L, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-06-03
Release date:2009-06-23
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of a Putative polyketide biosynthesis enoyl-CoA hydratase (pksH) from Bacillus subtilis
To be Published
3IKH
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BU of 3ikh by Molmil
Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Carbohydrate kinase, GLYCEROL
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-05
Release date:2009-08-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of Ribokinase in Complex with ATP and glycerol in the active site from Klebsiella pneumoniae
To be Published
7VKV
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BU of 7vkv by Molmil
NMR structure of the zeta-subunit of the F1F0-ATPase from Sinorhizobium meliloti
Descriptor: zeta-subunit
Authors:Yang, L.Y, Mendoza-Hoffmann, F, Buratto, D.
Deposit date:2021-10-01
Release date:2021-10-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inhibitory to non-inhibitory evolution of the zeta subunit of the F 1 F O -ATPase of Paracoccus denitrificans and alpha-proteobacteria as related to mitochondrial endosymbiosis.
Front Mol Biosci, 10, 2023
8P1U
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BU of 8p1u by Molmil
Structure of divisome complex FtsWIQLB
Descriptor: Cell division protein FtsB, Cell division protein FtsL, Cell division protein FtsQ, ...
Authors:Yang, L, Chang, S, Tang, D, Dong, H.
Deposit date:2023-05-12
Release date:2024-05-22
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the activation of the divisome complex FtsWIQLB.
Cell Discov, 10, 2024
3I3Y
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BU of 3i3y by Molmil
Crystal structure of Ribokinase in Complex with D-Ribose from Klebsiella pneumoniae
Descriptor: Carbohydrate kinase, GLYCEROL, SULFATE ION, ...
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-01
Release date:2009-07-21
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of Ribokinase in Complex with D-Ribose from Klebsiella pneumoniae
To be Published
2LS3
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BU of 2ls3 by Molmil
1H Chemical Shift Assignments for the secondary transmembrane domain from human copper transport 1
Descriptor: High affinity copper uptake protein 1
Authors:Yang, L, Huang, Z, Li, F.
Deposit date:2012-04-20
Release date:2012-06-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into the transmembrane domains of human copper transporter 1
To be Published
2LS4
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BU of 2ls4 by Molmil
1H Chemical Shift Assignments for the third transmembrane domain from the human copper transport 1
Descriptor: High affinity copper uptake protein 1
Authors:Yang, L, Huang, Z, Li, F.
Deposit date:2012-04-20
Release date:2012-06-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into the transmembrane domains of human copper transporter 1
To be Published
2LS2
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BU of 2ls2 by Molmil
1H Chemical Shift Assignments for the first transmembrane domain from human copper transport 1
Descriptor: High affinity copper uptake protein 1
Authors:Yang, L, Huang, Z, Li, F.
Deposit date:2012-04-20
Release date:2012-06-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into the transmembrane domains of human copper transporter 1
To be Published
6ZZL
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BU of 6zzl by Molmil
Crystal structure of the catalytic domain plus N-terminal linker of the acetyltransferase AceF (E2p) from Corynebacterium glutamicum.
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, GLYCEROL, PHOSPHATE ION
Authors:Yang, L, Bellinzoni, M.
Deposit date:2020-08-04
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.229 Å)
Cite:Actinobacteria challenge the paradigm: A unique protein architecture for a well-known, central metabolic complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
3Q1Y
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BU of 3q1y by Molmil
Allosteric regulation by Lysine residue: A novel anion-hole formation in the ribokinase family
Descriptor: GLYCEROL, Lin2199 protein, POTASSIUM ION
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-18
Release date:2011-01-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Allosteric regulation by Lysine residue: A novel anion-hole formation in the ribokinase family
To be Published
3HDP
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BU of 3hdp by Molmil
Crystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicum
Descriptor: Glyoxalase-I, NICKEL (II) ION
Authors:Satyanarayana, L, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-05-07
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal structure of the NI(II)-bound Glyoxalase-I from Clostridium acetobutylicum.
To be Published
3IN1
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BU of 3in1 by Molmil
Crystal structure of a putative Ribokinase in complex with ADP from E.coli
Descriptor: ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Uncharacterized sugar kinase ydjH
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-11
Release date:2009-09-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of a putative Ribokinase in complex with ADP from E.coli
To be Published
3IE7
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BU of 3ie7 by Molmil
The crystal structure of phosphofructokinase (lin2199) from Listeria innocua in complex with ATP at 1.6A
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, Lin2199 protein, ...
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-22
Release date:2009-08-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of phosphofructokinase (lin2199) from Listeria innocua in complex with ATP at 1.6A
To be Published
3EB2
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BU of 3eb2 by Molmil
Crystal structure of Dihydrodipicolinate Synthase from Rhodopseudomonas palustris at 2.0A resolution
Descriptor: Putative dihydrodipicolinate synthetase, TRIETHYLENE GLYCOL
Authors:Satyanarayana, L, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-26
Release date:2008-09-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of Dihydrodipicolinate Synthase from Rhodopseudomonas palustris at 2.0A resolution
To be Published
3NYW
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BU of 3nyw by Molmil
Crystal Structure of a betaketoacyl-[ACP] reductase (FabG) from Bacteroides thetaiotaomicron
Descriptor: Putative oxidoreductase
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-07-15
Release date:2010-09-15
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal Structure of a betaketoacyl-[ACP] reductase (FabG) from Bacteroides thetaiotaomicron
To be Published
7WBR
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BU of 7wbr by Molmil
Citrate synthase/lyase from Desulfurella acetivorans Desace_08345
Descriptor: CITRIC ACID, Citrate synthase
Authors:Yang, L.
Deposit date:2021-12-17
Release date:2022-01-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structure of Citrate synthase/lyase from Desulfurella acetivorans Desace_08345 complex with citrate
To Be Published
3IQ0
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BU of 3iq0 by Molmil
Crystal structure of a putative Ribokinase II in complex with ATP and Mg+2 from E.coli
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, putative Ribokinase II
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-18
Release date:2009-09-08
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of a putative Ribokinase (II)in complex with ATP and Mg+2 from E.coli
To be Published
3JUL
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BU of 3jul by Molmil
Crystal structure of Listeria innocua D-Tagatose-6-Phosphate Kinase bound with substrate
Descriptor: 6-O-phosphono-beta-D-tagatofuranose, Lin2199 protein, MAGNESIUM ION
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-09-15
Release date:2009-10-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Listeria innocua D-Tagatose-6-Phosphate Kinase bound with substrate
To be Published
3K9E
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BU of 3k9e by Molmil
Crystal structure of a putative Ribokinase II (Apo Form) from E.coli
Descriptor: PUTATIVE RIBOKINASE II
Authors:Satyanarayana, L, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-15
Release date:2009-11-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a putative Ribokinase II (Apo Form) from E.coli
To be Published

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PDB entries from 2024-07-17

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