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PDB: 251 件

1L2H
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Crystal structure of Interleukin 1-beta F42W/W120F mutant
分子名称: Interleukin 1-beta
著者Rudolph, M.G, Kelker, M.S, Schneider, T.R, Yeates, T.O, Oseroff, V, Heidary, D.K, Jennings, P.A, Wilson, I.A.
登録日2002-02-21
公開日2003-02-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Use of multiple anomalous dispersion to phase highly merohedrally twinned crystals of interleukin-1beta.
Acta Crystallogr.,Sect.D, 59, 2003
1JG3
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Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine & VYP(ISP)HA substrate
分子名称: ADENOSINE, CHLORIDE ION, SODIUM ION, ...
著者Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
登録日2001-06-22
公開日2001-11-16
最終更新日2011-07-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
1JG1
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Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-ADENOSYL-L-HOMOCYSTEINE
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, protein-L-isoaspartate O-methyltransferase
著者Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
登録日2001-06-22
公開日2001-11-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
1JG4
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Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with S-adenosylmethionine
分子名称: S-ADENOSYLMETHIONINE, protein-L-isoaspartate O-methyltransferase
著者Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
登録日2001-06-22
公開日2001-11-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
1JG2
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Crystal Structure of L-isoaspartyl (D-aspartyl) O-methyltransferase with adenosine
分子名称: ADENOSINE, SODIUM ION, protein-L-isoaspartate O-methyltransferase
著者Griffith, S.C, Sawaya, M.R, Boutz, D, Thapar, N, Katz, J, Clarke, S, Yeates, T.O.
登録日2001-06-22
公開日2001-11-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of a protein repair methyltransferase from Pyrococcus furiosus with its L-isoaspartyl peptide substrate.
J.Mol.Biol., 313, 2001
4W74
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Crystal Structure of Full-Length Split GFP Mutant E115C/T118H With Metal Mediated Crystal Contacts, P 1 21 1 Space Group
分子名称: ZINC ION, fluorescent protein E115C/T118H
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-21
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6P
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Crystal Structure of Full-Length Split GFP Mutant D102C Disulfide Dimer, P 21 21 21 Space Group
分子名称: fluorescent protein D102C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.085 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W73
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Crystal Structure of Full-Length Split GFP Mutant E115C/T118H Disulfide Dimer P 21 21 21
分子名称: IMIDAZOLE, NICKEL (II) ION, fluorescent protein E115C/T118H
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-21
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6A
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Crystal Structure of Full-Length Split GFP Mutant Q157C Disulfide Dimer, P 32 2 1 Space Group
分子名称: fluorescent protein Q157C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.991 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6H
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Crystal Structure of Full-Length Split GFP Mutant D190C Disulfide Dimer, P 65 Space Group
分子名称: fluorescent protein D190C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.953 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6L
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Crystal Structure of Full-Length Split GFP Mutant D117C Disulfide Dimer, I 41 2 2 Space Group
分子名称: fluorescent protein D117C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6S
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Crystal Structure of Full-Length Split GFP Mutant K126C Disulfide Dimer, P 43 21 2 Space Group
分子名称: GLYCEROL, PHOSPHATE ION, fluorescent protein E124H/K126C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W75
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Crystal Structure of Full-Length Split GFP Mutant D21H/K26C Disulfide and Metal-Mediated Dimer, P 21 21 21 Space Group, Form 1
分子名称: COPPER (II) ION, fluorescent protein D21H/K26C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-21
公開日2015-03-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.473 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W7A
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Crystal Structure of Full-Length Split GFP Mutant D21H/K26C Disulfide and Metal-Mediated Dimer, P 21 21 21 Space Group, Form 4
分子名称: COPPER (II) ION, fluorescent protein D21H/K26C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-21
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.603 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
8T0B
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Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2023-05-31
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
8T1N
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Micro-ED Structure of a Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Cascio, D, Sawaya, M.R, Cannon, K.A, Rodriguez, J.A, Yeates, T.O.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-04-10
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
8TFS
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Crystal structure of the Rhodanese-like domain of Vretifemale_1082 from Volvox reticuliferus
分子名称: Rhodanese domain-containing protein
著者Arbing, M.A, Jonikas, M, Yeates, T.O.
登録日2023-07-11
公開日2023-08-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the Rhodanese-like domain of Vretifemale_1082 from Volvox reticuliferus
To Be Published
8UMP
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T33-ml35 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms
分子名称: T33-ml35-redesigned-CutA-fold, T33-ml35-redesigned-TPR-domain-fold
著者Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-18
公開日2023-11-15
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 2024
8UF0
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T33-ml23 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms
分子名称: T33-ml23-redesigned-CutA-fold, T33-ml23-redesigned-tandem-BMC-T-fold
著者Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-03
公開日2023-11-15
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.02 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 2024
8UI2
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T33-ml28 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms
分子名称: T33-ml28-redesigned-CutA-fold, T33-ml28-redesigned-tandem-BMC-T-fold
著者Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-09
公開日2024-03-06
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 2024
8UKM
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T33-ml30 - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms
分子名称: T33-ml30-redesigned-4-OT-fold, T33-ml30-redesigned-tandem-BMC-T-fold
著者Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-14
公開日2024-03-06
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 2024
8UMR
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T33-ml35 Assembly Intermediate - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms
分子名称: T33-ml35-redesigned-CutA-fold, T33-ml35-redesigned-TPR-domain-fold
著者Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-18
公開日2024-03-06
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (4.42 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 2024
8UN1
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T33-ml23 Assembly Intermediate - Designed Tetrahedral Protein Cage Using Machine Learning Algorithms
分子名称: T33-ml23-redesigned-CutA-fold, T33-ml23-redesigned-tandem-BMC-T-fold
著者Castells-Graells, R, Meador, K, Sawaya, M.R, Yeates, T.O.
登録日2023-10-18
公開日2024-03-06
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献A suite of designed protein cages using machine learning and protein fragment-based protocols.
Structure, 2024
8T1M
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Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Agdanowski, M.P, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
5CY5
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Crystal structure of the T33-51H designed self-assembling protein tetrahedron
分子名称: T33-51H-A, T33-51H-B
著者Cannon, K.A, Cascio, D, Park, R, Boyken, S, King, N, Yeates, T.O.
登録日2015-07-30
公開日2016-08-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Design and structure of two new protein cages illustrate successes and ongoing challenges in protein engineering.
Protein Sci., 29, 2020

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件を2024-06-12に公開中

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