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PDB: 251 件

2Z9H
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BU of 2z9h by Molmil
Ethanolamine utilization protein, EutN
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, Ethanolamine utilization protein eutN
著者Tanaka, S, Sawaya, M.R, Yeates, T.O.
登録日2007-09-20
公開日2007-10-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献The crystal structure of ethanolamine utilization protein EutN from E. coli
To be Published
4MWG
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BU of 4mwg by Molmil
Crystal structure of Burkholderia xenovorans DmrB apo form: A Cubic Protein Cage for Redox Transfer
分子名称: Putative dihydromethanopterin reductase (AfpA), SULFATE ION
著者Bobik, T.A, Cascio, D, Jorda, J, McNamara, D.E, Bustos, C, Wang, T.C, Rasche, M.E, Yeates, T.O.
登録日2013-09-24
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of dihydromethanopterin reductase, a cubic protein cage for redox transfer
J.Biol.Chem., 289, 2014
3BN4
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BU of 3bn4 by Molmil
Carboxysome Subunit, CcmK1
分子名称: Carbon dioxide-concentrating mechanism protein ccmK homolog 1, SULFATE ION
著者Tanaka, S, Sawaya, M.R, Yeates, T.O.
登録日2007-12-13
公開日2008-03-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Atomic-level models of the bacterial carboxysome shell.
Science, 319, 2008
8V9O
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BU of 8v9o by Molmil
Imaging scaffold engineered to bind the therapeutic protein target BARD1
分子名称: CALCIUM ION, Tetrahedral Nanocage Cage Component Fused to Anti-BARD1 Darpin, Tetrahedral Nanocage Cage, ...
著者Agdanowski, M.P, Castells-Graells, R, Sawaya, M.R, Yeates, T.O, Arbing, M.A.
登録日2023-12-08
公開日2024-05-15
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (3.81 Å)
主引用文献X-ray crystal structure of a designed rigidified imaging scaffold in the ligand-free conformation.
Acta Crystallogr.,Sect.F, 80, 2024
5UI2
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BU of 5ui2 by Molmil
CRYSTAL STRUCTURE OF ORANGE CAROTENOID PROTEIN
分子名称: (3'R)-3'-hydroxy-beta,beta-caroten-4-one, CHLORIDE ION, Orange carotenoid-binding protein, ...
著者KERFELD, C.A, SAWAYA, M.R, VISHNU, B, KROGMANN, D, YEATES, T.O.
登録日2017-01-12
公開日2017-01-25
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of a cyanobacterial water-soluble carotenoid binding protein.
Structure, 11, 2003
2EWH
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BU of 2ewh by Molmil
Carboxysome protein CsoS1A from Halothiobacillus neapolitanus
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Major carboxysome shell protein 1A
著者Tsai, Y, Sawaya, M.R, Kerfeld, C.A, Yeates, T.O.
登録日2005-11-03
公開日2006-11-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Analysis of CsoS1A and the Protein Shell of the Halothiobacillus neapolitanus Carboxysome.
Plos Biol., 5, 2007
6X1I
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BU of 6x1i by Molmil
Two-Component D3 Assembly Constructed by Fusing Symmetric Oligomers to Coiled Coils
分子名称: Cob_adeno_trans domain-containing protein PH0671 fused to a coiled coil, SnoaL-like Protein fused to a coiled coil
著者Laniado, J, Yeates, T.O, Sawaya, M.R.
登録日2020-05-18
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (4.32 Å)
主引用文献Geometric Lessons and Design Strategies for Nanoscale Protein Cages.
Acs Nano, 15, 2021
1YAC
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BU of 1yac by Molmil
THE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE YCAC GENE PRODUCT FROM ESCHERICHIA COLI REVEALS AN OCTAMERIC HYDROLASE OF UNKNOWN SPECIFICITY
分子名称: YCAC GENE PRODUCT
著者Colovos, C, Cascio, D, Yeates, T.O.
登録日1998-07-29
公開日1999-02-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The 1.8 A crystal structure of the ycaC gene product from Escherichia coli reveals an octameric hydrolase of unknown specificity.
Structure, 6, 1998
4EGG
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BU of 4egg by Molmil
Computationally Designed Self-assembling tetrahedron protein, T310
分子名称: GLYCEROL, Putative acetyltransferase SACOL2570
著者Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
登録日2012-03-30
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
4EDI
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BU of 4edi by Molmil
Disulfide bonded EutL from Clostridium perfringens
分子名称: Ethanolamine utilization protein, SODIUM ION
著者Thompson, M.C, Cascio, D, Crowley, C.S, Kopstein, J.S, Yeates, T.O.
登録日2012-03-27
公開日2013-03-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
6C9I
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Single-Particle reconstruction of DARP14 - A designed protein scaffold displaying ~17kDa DARPin proteins - Scaffold
分子名称: DARP14 - Subunit A with DARPin, DARP14 - Subunit B
著者Gonen, S, Liu, Y, Yeates, T.O, Gonen, T.
登録日2018-01-26
公開日2018-03-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Near-atomic cryo-EM imaging of a small protein displayed on a designed scaffolding system.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2Q31
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BU of 2q31 by Molmil
Actin Dimer Cross-linked Between Residues 41 and 374 and proteolytically cleaved by subtilisin between residues 47 and 48.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Sawaya, M.R, Pashkov, I, Kudryashov, D.S, Reisler, E, Yeates, T.O.
登録日2007-05-29
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Multiple crystal structures of actin dimers and their implications for interactions in the actin filament.
Acta Crystallogr.,Sect.D, 64, 2008
2PLT
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BU of 2plt by Molmil
STRUCTURE DETERMINATION OF PLASTOCYANIN FROM A CRYSTAL SPECIMEN WITH HEMIHEDRAL TWINNING FRACTION OF ONE-HALF
分子名称: CALCIUM ION, COPPER (II) ION, PLASTOCYANIN
著者Redinbo, M.R, Merchant, S, Yeates, T.O.
登録日1993-05-06
公開日1993-10-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The 1.5-A crystal structure of plastocyanin from the green alga Chlamydomonas reinhardtii.
Biochemistry, 32, 1993
4W6C
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BU of 4w6c by Molmil
Crystal Structure of Full-Length Split GFP Mutant K26C Disulfide Dimer, P 21 21 21 Space Group
分子名称: fluorescent protein D21H/K26C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.4924 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6F
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BU of 4w6f by Molmil
Crystal Structure of Full-Length Split GFP Mutant K26C Disulfide Dimer, P 32 2 1 Space Group, Form 2
分子名称: IMIDAZOLE, NICKEL (II) ION, fluorescent protein D21H/K26C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6K
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BU of 4w6k by Molmil
Crystal Structure of Full-Length Split GFP Mutant D117C Disulfide Dimer, P 41 21 2 Space Group
分子名称: fluorescent protein D117C
著者Leibly, D.J, Waldo, G.S, Yeates, T.O.
登録日2014-08-20
公開日2015-02-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.877 Å)
主引用文献A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
2Q1N
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BU of 2q1n by Molmil
Actin Dimer Cross-linked Between Residues 41 and 374
分子名称: Actin, alpha skeletal muscle, CALCIUM ION, ...
著者Sawaya, M.R, Pashkov, I, Kudryashov, D.S, Adisetiyo, H, Reisler, E, Yeates, T.O.
登録日2007-05-25
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Multiple crystal structures of actin dimers and their implications for interactions in the actin filament.
Acta Crystallogr.,Sect.D, 64, 2008
2Q36
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BU of 2q36 by Molmil
Actin Dimer Cross-linked between Residues 191 and 374 and complexed with Kabiramide C
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Sawaya, M.R, Pashkov, I, Kudryashov, D.S, Reisler, E, Yeates, T.O.
登録日2007-05-29
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Multiple crystal structures of actin dimers and their implications for interactions in the actin filament.
Acta Crystallogr.,Sect.D, 64, 2008
2PY8
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BU of 2py8 by Molmil
RbcX
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CHLORIDE ION, Hypothetical protein rbcX
著者Tanaka, S, Sawaya, M.R, Kerfeld, C.A, Yeates, T.O.
登録日2007-05-15
公開日2007-10-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of the RuBisCO chaperone RbcX from Synechocystis sp. PCC6803.
Acta Crystallogr.,Sect.D, 63, 2007
6NHT
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BU of 6nht by Molmil
Single particle reconstruction of the symmetric core an engineered protein scaffold
分子名称: DARP14 - Subunit A with DARPin, DARP14 - Subunit B
著者Liu, Y, Huynh, D, Yeates, T.O.
登録日2018-12-23
公開日2019-05-08
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献A 3.8 angstrom resolution cryo-EM structure of a small protein bound to an imaging scaffold.
Nat Commun, 10, 2019
6NHV
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BU of 6nhv by Molmil
Single particle reconstruction of DARPin and its bound GFP on a symmetric scaffold
分子名称: DARP14 - Subunit B, Subunit A-DARPin, superfolder GFP
著者Liu, Y, Huynh, D, Yeates, T.O.
登録日2018-12-24
公開日2019-05-08
最終更新日2019-11-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A 3.8 angstrom resolution cryo-EM structure of a small protein bound to an imaging scaffold.
Nat Commun, 10, 2019
6ARD
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BU of 6ard by Molmil
Monoclinic EutL - structure determined from merged "Group 2" data
分子名称: Ethanolamine utilization protein, SODIUM ION
著者Thompson, M.C, Cascio, D, Yeates, T.O.
登録日2017-08-22
公開日2017-10-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism.
Acta Crystallogr D Struct Biol, 74, 2018
6ARC
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BU of 6arc by Molmil
Monoclinic EutL - structure determined from merged "Group 1" data
分子名称: CHLORIDE ION, Ethanolamine utilization protein, SODIUM ION
著者Thompson, M.C, Cascio, D, Yeates, T.O.
登録日2017-08-22
公開日2017-10-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism.
Acta Crystallogr D Struct Biol, 74, 2018
4D9J
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BU of 4d9j by Molmil
Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains
分子名称: Designed 16nm tetrahedral protein cage containing Non-haem bromoperoxidase BPO-A2 and Matrix protein 1
著者Lai, Y.-T, Cascio, D, Yeates, T.O.
登録日2012-01-11
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.92 Å)
主引用文献Structure of a 16-nm cage designed by using protein oligomers.
Science, 336, 2012
4DDF
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BU of 4ddf by Molmil
Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group P4
分子名称: CHLORIDE ION, Propanediol utilization polyhedral body protein PduT, SULFATE ION
著者Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
登録日2012-01-18
公開日2012-06-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012

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件を2024-11-06に公開中

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