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PDB: 227 results

4ZGD
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BU of 4zgd by Molmil
Mutant R157A of Fe-Type Nitrile Hydratase from Comamonas testosteroni Ni1
Descriptor: FE (III) ION, Nitrile hydratase alpha subunit, Nitrile hydratase beta subunit
Authors:Wu, R, Martinez, S, Holz, R, Liu, D.
Deposit date:2015-04-22
Release date:2015-07-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Analyzing the catalytic role of active site residues in the Fe-type nitrile hydratase from Comamonas testosteroni Ni1.
J.Biol.Inorg.Chem., 20, 2015
4ZSW
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BU of 4zsw by Molmil
Pig Brain GABA-AT inactivated by (E)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic acid
Descriptor: (1S)-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]cyclopent-3-ene-1,3-dicarboxylic acid, 4-aminobutyrate aminotransferase, mitochondrial, ...
Authors:Wu, R, Lee, H, Le, H.V, Doud, E, Sanishvili, R, Compton, P, Kelleher, N.L, Silverman, R.B, Liu, D.
Deposit date:2015-05-14
Release date:2015-07-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of Inactivation of GABA Aminotransferase by (E)- and (Z)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic Acid.
Acs Chem.Biol., 10, 2015
4ZSY
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BU of 4zsy by Molmil
Pig Brain GABA-AT inactivated by (Z)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic acid.
Descriptor: (1S)-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]cyclopent-3-ene-1,3-dicarboxylic acid, 4-aminobutyrate aminotransferase, mitochondrial, ...
Authors:Wu, R, Lee, H, Le, H.V, Doud, E, Sanishvili, R, Compton, P, Kelleher, N.L, Silverman, R.B, Liu, D.
Deposit date:2015-05-14
Release date:2015-07-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of Inactivation of GABA Aminotransferase by (E)- and (Z)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic Acid.
Acs Chem.Biol., 10, 2015
8VES
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BU of 8ves by Molmil
Structure of YicC endoribonuclease bound to an RNA substrate
Descriptor: Endoribonuclease YicC, RNA (26-MER)
Authors:Wu, R, Lazarus, M.B.
Deposit date:2023-12-20
Release date:2024-09-04
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structural insights into RNA cleavage by a novel family of bacterial RNases.
Nucleic Acids Res., 52, 2024
4ZGE
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BU of 4zge by Molmil
Double Mutant H80W/H81W of Fe-Type Nitrile Hydratase from Comamonas testosteroni Ni1
Descriptor: FE (III) ION, Nitrile hydratase alpha subunit, Nitrile hydratase beta subunit
Authors:Wu, R, Martinez, S, Holz, R, Liu, D.
Deposit date:2015-04-22
Release date:2015-07-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analyzing the catalytic role of active site residues in the Fe-type nitrile hydratase from Comamonas testosteroni Ni1.
J.Biol.Inorg.Chem., 20, 2015
3H2Z
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BU of 3h2z by Molmil
The crystal structure of mannitol-1-phosphate dehydrogenase from Shigella flexneri
Descriptor: ACETATE ION, GLYCEROL, Mannitol-1-phosphate 5-dehydrogenase, ...
Authors:Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-04-15
Release date:2009-06-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of mannitol-1-phosphate dehydrogenase from Shigella flexneri
To be Published
3U27
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BU of 3u27 by Molmil
Crystal structure of ethanolamine utilization protein EutL from Leptotrichia buccalis C-1013-b
Descriptor: CALCIUM ION, GLYCEROL, Microcompartments protein, ...
Authors:Wu, R, Gu, M, Kerfeld, C.A, Salmeen, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-10-01
Release date:2012-02-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Crystal structure of ethanolamine utilization protein EutL from Leptotrichia buccalis C-1013-b
To be Published
1RZ2
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BU of 1rz2 by Molmil
1.6A crystal structure of the protein BA4783/Q81L49 (similar to sortase B) from Bacillus anthracis.
Descriptor: conserved hypothetical protein BA4783
Authors:Wu, R, Zhang, R, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-12-23
Release date:2004-07-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of sortase B from Staphylococcus aureus and Bacillus anthracis reveal catalytic amino acid triad in the active site.
Structure, 12, 2004
1RLJ
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BU of 1rlj by Molmil
Structural Genomics, a Flavoprotein NrdI from Bacillus subtilis
Descriptor: FLAVIN MONONUCLEOTIDE, IODIDE ION, NrdI protein
Authors:Wu, R, Zhang, R, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-11-25
Release date:2004-07-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:1.5A crystal structure of a thioredoxin-like protein NrdI from Bacillus subtilis
To be Published
4EW7
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BU of 4ew7 by Molmil
The crystal structure of conjugative transfer PAS_like domain from Salmonella enterica subsp. enterica serovar Typhimurium
Descriptor: ACETIC ACID, CHLORIDE ION, Conjugative transfer: regulation, ...
Authors:Wu, R, Jedrzejczak, R.P, Brown, R.N, Cort, J.R, Heffron, F, Nakayasu, E.S, Adkins, J.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
Deposit date:2012-04-26
Release date:2012-09-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The crystal structure of conjugative transfer PAS_like domain from Salmonella enterica subsp. enterica serovar Typhimurium
To be Published
2I5U
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BU of 2i5u by Molmil
Crystal structure of DnaD domain protein from Enterococcus faecalis. Structural genomics target APC85179
Descriptor: DnaD domain protein, MAGNESIUM ION
Authors:Wu, R, Zhang, R, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-25
Release date:2006-11-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:1.5 A crystal structure of a DnaD domain protein from Enterococcus Faecalis
To be Published, 2006
9BR7
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BU of 9br7 by Molmil
Crystal structure of human succinyl-CoA:glutarate-CoA transferase (SUGCT) in complex with Losartan carboxylic acid
Descriptor: AMMONIUM ION, SULFATE ION, Succinate--hydroxymethylglutarate CoA-transferase, ...
Authors:Wu, R, Lazarus, M.B.
Deposit date:2024-05-10
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Characterization, Structure, and Inhibition of the Human Succinyl-CoA:glutarate-CoA Transferase, a Putative Genetic Modifier of Glutaric Aciduria Type 1.
Acs Chem.Biol., 19, 2024
5CVD
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BU of 5cvd by Molmil
Crystal structure of human NRMT1 in complex with alpha-N-dimethylated human CENP-A peptide
Descriptor: N-teminal peptide from Histone H3-like centromeric protein A, N-terminal Xaa-Pro-Lys N-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Wu, R, Li, H.
Deposit date:2015-07-26
Release date:2015-11-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Molecular basis for histone N-terminal methylation by NRMT1
Genes Dev., 29, 2015
5CVE
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BU of 5cve by Molmil
Crystal Structure of human NRMT1 in complex with dimethylated fly H2B peptide and SAH
Descriptor: N-terminal Xaa-Pro-Lys N-methyltransferase 1, N-terminal peptide from Histone H2B, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Wu, R, Li, H.
Deposit date:2015-07-26
Release date:2015-11-25
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular basis for histone N-terminal methylation by NRMT1
Genes Dev., 29, 2015
2OQW
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BU of 2oqw by Molmil
The crystal structure of sortase B from B.anthracis in complex with AAEK1
Descriptor: Sortase B
Authors:Wu, R, Zhang, R, Marresso, A.W, Schneewind, O, Joachimiak, A.
Deposit date:2007-02-01
Release date:2007-06-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Activation of inhibitors by sortase triggers irreversible modification of the active site.
J.Biol.Chem., 282, 2007
2OQZ
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BU of 2oqz by Molmil
The crystal structure of sortase B from B.anthracis in complex with AAEK2
Descriptor: ACETIC ACID, Sortase B
Authors:Wu, R, Zhang, R, Maresso, A.W, Schneewind, O, Joachimiak, A.
Deposit date:2007-02-01
Release date:2007-06-19
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Activation of inhibitors by sortase triggers irreversible modification of the active site.
J.Biol.Chem., 282, 2007
2OT9
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BU of 2ot9 by Molmil
Crystal structure of YaeQ protein from Pseudomonas syringae
Descriptor: Hypothetical protein, S,R MESO-TARTARIC ACID, SODIUM ION
Authors:Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-02-07
Release date:2007-03-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The crystal structure of YaeQ protein from Pseudomonas syringae
To be Published
2P7J
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BU of 2p7j by Molmil
Crystal structure of the domain of putative sensory box/GGDEF family protein from Vibrio parahaemolyticus
Descriptor: ACETIC ACID, Putative sensory box/GGDEF family protein, SODIUM ION, ...
Authors:Wu, R, James, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-03-20
Release date:2007-05-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The crystal structure of the domain of putative sensory box/GGDEF family protein from Vibrio parahaemolyticus
To be Published
2PPW
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BU of 2ppw by Molmil
The crystal structure of uncharacterized Ribose 5-phosphate isomerase RpiB from Streptococcus pneumoniae
Descriptor: Conserved domain protein, SULFATE ION
Authors:Wu, R, Zhang, R, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-04-30
Release date:2007-06-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The crystal structure of uncharacterized Ribose 5-phosphate isomerase RpiB from Streptococcus pneumoniae.
To be Published
4MGR
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BU of 4mgr by Molmil
The crystal structure of Bacillus subtilis GabR, an autorepressor and PLP- and GABA-dependent transcriptional activator of gabT
Descriptor: ACETATE ION, HTH-type transcriptional regulatory protein GabR, IMIDAZOLE, ...
Authors:Wu, R, Edayathumangalam, R, Garcia, R, Wang, Y, Wang, W, Kreinbring, C.A, Bach, A, Liao, J, Stone, T, Terwilliger, T, Hoang, Q.Q, Belitsky, B.R, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2013-08-28
Release date:2013-10-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of gabT.
Proc.Natl.Acad.Sci.USA, 110, 2013
3K2N
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BU of 3k2n by Molmil
The crystal structure of sigma-54-dependent transcriptional regulator domain from Chlorobium Tepidum TLS
Descriptor: Sigma-54-dependent transcriptional regulator
Authors:Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-09-30
Release date:2010-01-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of sigma-54-dependent transcriptional regulator domain from Chlorobium
To be Published
4EWF
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BU of 4ewf by Molmil
The crystal structure of beta-lactamase from Sphaerobacter thermophilus DSM 20745
Descriptor: ACETIC ACID, Beta-lactamase, SULFATE ION
Authors:Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-04-26
Release date:2012-09-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of beta-lactamase from Sphaerobacter thermophilus DSM 20745
To be Published
5UBL
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BU of 5ubl by Molmil
A circularly permuted version of PvdQ (cpPvdQ)
Descriptor: Acyl-homoserine lactone acylase PvdQ
Authors:Wu, R, Mascarenhas, R, Catlin, D, Clevenger, K, Fast, W, Liu, D.
Deposit date:2016-12-20
Release date:2017-03-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Circular Permutation Reveals a Chromophore Precursor Binding Pocket of the Siderophore Tailoring Enzyme PvdQ
To Be Published
4JGQ
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BU of 4jgq by Molmil
The crystal structure of sporulation kinase D mutant sensor domain, r131a, from Bacillus subtilis subsp in co-crystallization with pyruvate
Descriptor: ACETIC ACID, Sporulation kinase D
Authors:Wu, R, Schiffer, M, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-03-01
Release date:2013-05-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Insight into the sporulation phosphorelay: Crystal structure of the sensor domain of Bacillus subtilis histidine kinase, KinD.
Protein Sci., 22, 2013
4JGR
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BU of 4jgr by Molmil
The crystal structure of sporulation kinase D mutant sensor domain, R131A, from Bacillus subtilis subsp at 2.4A resolution
Descriptor: ACETIC ACID, GLYCEROL, Sporulation kinase D
Authors:Wu, R, Schiffer, M, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-03-01
Release date:2013-05-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insight into the sporulation phosphorelay: Crystal structure of the sensor domain of Bacillus subtilis histidine kinase, KinD.
Protein Sci., 22, 2013

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