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PDB: 62 件

1KRW
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SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN
分子名称: NITROGEN REGULATION PROTEIN NR(I)
著者Hastings, C.A, Lee, S.-Y, Cho, H.S, Yan, D, Kustu, S, Wemmer, D.E.
登録日2002-01-10
公開日2003-08-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献High-Resolution Solution Structure of the Beryllofluoride-Activated NtrC Receiver Domain
Biochemistry, 42, 2003
1ZIT
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Structure of the receiver domain of NtrC4 from Aquifex aeolicus
分子名称: transcriptional regulator (NtrC family)
著者Matsubara, K, Pelton, J.G, Wemmer, D.E.
登録日2005-04-27
公開日2006-05-09
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and consequences of activiation of the receiver domain of NtrC4 from Aquifex aeolicus
To be Published
1ZY2
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Crystal structure of the phosphorylated receiver domain of the transcription regulator NtrC1 from Aquifex aeolicus
分子名称: MAGNESIUM ION, transcriptional regulator NtrC1
著者Doucleff, M, Chen, B, Maris, A.E, Wemmer, D.E, Kondrashkina, E, Nixon, B.T.
登録日2005-06-09
公開日2005-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Negative regulation of AAA + ATPase assembly by two component receiver domains: a transcription activation mechanism that is conserved in mesophilic and extremely hyperthermophilic bacteria
J.Mol.Biol., 353, 2005
1E74
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NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION VARIANT R11E
分子名称: ALPHA-CONOTOXIN IM1(R11E)
著者Rogers, J.P, Luginbuhl, P, Pemberton, K, Harty, P, Wemmer, D.E, Stevens, R.C.
登録日2000-08-24
公開日2000-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure-Activity Relationships in a Peptidic Alpha7 Nicotinic Acetylcholine Receptor Antagonist
J.Mol.Biol., 304, 2000
1E76
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NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION VARIANT D5N
分子名称: ALPHA-CONOTOXIN IM1(D5N)
著者Rogers, J.P, Luginbuhl, P, Pemberton, K, Harty, P, Wemmer, D.E, Stevens, R.C.
登録日2000-08-24
公開日2000-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure-Activity Relationships in a Peptidic Alpha7 Nicotinic Acetylcholine Receptor Antagonist
J.Mol.Biol., 304, 2000
1E75
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NMR SOLUTION STRUCTURE OF ALPHA-CONOTOXIN IM1 POINT MUTATION VARIANT R7L
分子名称: ALPHA-CONOTOXIN IM1(R7L)
著者Rogers, J.P, Luginbuhl, P, Pemberton, K, Harty, P, Wemmer, D.E, Stevens, R.C.
登録日2000-08-24
公開日2000-12-27
最終更新日2024-10-23
実験手法SOLUTION NMR
主引用文献Structure-Activity Relationships in a Peptidic Alpha7 Nicotinic Acetylcholine Receptor Antagonist
J.Mol.Biol., 304, 2000
1FQW
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CRYSTAL STRUCTURE OF ACTIVATED CHEY
分子名称: BERYLLIUM TRIFLUORIDE ION, CHEMOTAXIS CHEY PROTEIN, MANGANESE (II) ION
著者Lee, S.Y, Cho, H.S, Pelton, J.G, Yan, D, Berry, E.A, Wemmer, D.E.
登録日2000-09-07
公開日2001-07-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Crystal structure of activated CheY. Comparison with other activated receiver domains.
J.Biol.Chem., 276, 2001
1DJM
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SOLUTION STRUCTURE OF BEF3-ACTIVATED CHEY FROM ESCHERICHIA COLI
分子名称: CHEMOTAXIS PROTEIN Y
著者Cho, H.S, Lee, S.Y, Yan, D, Pan, X, Parkinson, J.S, Kustu, S, Wemmer, D.E, Pelton, J.G.
登録日1999-12-03
公開日2000-04-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of activated CheY.
J.Mol.Biol., 297, 2000
1DC8
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STRUCTURE OF A TRANSIENTLY PHOSPHORYLATED "SWITCH" IN BACTERIAL SIGNAL TRANSDUCTION
分子名称: NITROGEN REGULATION PROTEIN
著者Kern, D, Volkman, B.F, Luginbuhl, P, Nohaile, M.J, Kustu, S, Wemmer, D.E.
登録日1999-11-04
公開日2000-01-05
最終更新日2022-12-21
実験手法SOLUTION NMR
主引用文献Structure of a transiently phosphorylated switch in bacterial signal transduction.
Nature, 402, 1999
1DC7
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STRUCTURE OF A TRANSIENTLY PHOSPHORYLATED "SWITCH" IN BACTERIAL SIGNAL TRANSDUCTION
分子名称: NITROGEN REGULATION PROTEIN
著者Kern, D, Volkman, B.F, Luginbuhl, P, Nohaile, M.J, Kustu, S, Wemmer, D.E.
登録日1999-11-04
公開日2000-01-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of a transiently phosphorylated switch in bacterial signal transduction.
Nature, 402, 1999
3DZD
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Crystal structure of sigma54 activator NTRC4 in the inactive state
分子名称: ADENOSINE-5'-DIPHOSPHATE, SODIUM ION, Transcriptional regulator (NtrC family)
著者Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E.
登録日2008-07-29
公開日2008-11-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
3E7L
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Crystal structure of sigma54 activator NtrC4's DNA binding domain
分子名称: Transcriptional regulator (NtrC family), ZINC ION
著者Batchelor, J.D, Doucleff, M, Lee, C.-J, Matsubara, K, De Carlo, S, Heideker, J, Lamers, M.M, Pelton, J.G, Wemmer, D.E.
登録日2008-08-18
公開日2008-11-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.252 Å)
主引用文献Structure and regulatory mechanism of Aquifex aeolicus NtrC4: variability and evolution in bacterial transcriptional regulation.
J.Mol.Biol., 384, 2008
1LLS
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CRYSTAL STRUCTURE OF UNLIGANDED MALTOSE BINDING PROTEIN WITH XENON
分子名称: Maltose-binding periplasmic protein, XENON
著者Rubin, S.M, Lee, S.-Y, Ruiz, E.J, Pines, A, Wemmer, D.E.
登録日2002-04-30
公開日2002-09-18
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DETECTION AND CHARACTERIZATION OF XENON-BINDING SITES IN PROTEINS BY 129XE NMR SPECTROSCOPY
J.MOL.BIOL., 322, 2002
1PA4
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Solution structure of a putative ribosome-binding factor from Mycoplasma pneumoniae (MPN156)
分子名称: Probable ribosome-binding factor A
著者Rubin, S.M, Pelton, J.G, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
登録日2003-05-13
公開日2004-03-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a putative ribosome binding protein from Mycoplasma pneumoniae and comparison to a distant homolog.
J.STRUCT.FUNCT.GENOM., 4, 2003
1NY6
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Crystal structure of sigm54 activator (AAA+ ATPase) in the active state
分子名称: ADENOSINE-5'-DIPHOSPHATE, transcriptional regulator (NtrC family)
著者Lee, S.Y, de la Torre, A, Kustu, S, Nixon, B.T, Wemmer, D.E.
登録日2003-02-11
公開日2003-11-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Regulation of the transcriptional activator NtrC1: structural studies of the regulatory and AAA+ ATPase domains
Genes Dev., 17, 2003
1NTR
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SOLUTION STRUCTURE OF THE N-TERMINAL RECEIVER DOMAIN OF NTRC
分子名称: NTRC RECEIVER DOMAIN
著者Volkman, B.F, Nohaile, M.J, Amy, N.K, Kustu, S, Wemmer, D.E.
登録日1994-09-16
公開日1995-01-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the N-terminal receiver domain of NTRC.
Biochemistry, 34, 1995
1PQQ
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NMR Structure of a Cyclic Polyamide-DNA Complex
分子名称: 45-(3-AMINOPROPYL)-5,11,22,28,34-PENTAMETHYL-3,9,15,20,26,32,38,43-OCTAOXO-2,5,8,14,19,22,25,28,31,34,37,42,45,48-TETRADECAAZA-11-AZONIAHEPTACYCLO[42.2.1.1~4,7~.1~10,13~.1~21,24~.1~27,30~.1~33,36~]DOPENTACONTA-1(46),4(52),6,10(51),12,21(50),23,27(49),29,33(48),35,44(47)-DODECAENE, 5'-D(*CP*GP*CP*TP*AP*AP*CP*AP*GP*GP*C)-3', 5'-D(*GP*CP*CP*TP*GP*TP*TP*AP*GP*CP*G)-3'
著者Zhang, Q, Dwyer, T.J, Tsui, V, Case, D.A, Cho, J, Dervan, P.B, Wemmer, D.E.
登録日2003-06-18
公開日2004-06-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Structure of a Cyclic Polyamide-DNA Complex.
J.Am.Chem.Soc., 126, 2004
1NTC
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SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF NTRC WITH THREE ALANINE SUBSTITUTIONS
分子名称: PROTEIN (NITROGEN REGULATION PROTEIN (NTRC))
著者Pelton, J.G, Kustu, S, Wemmer, D.E.
登録日1999-05-26
公開日1999-06-04
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA-binding domain of NtrC with three alanine substitutions.
J.Mol.Biol., 292, 1999
1NY5
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Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Lee, S.Y, de la Torre, A, Kustu, S, Nixon, B.T, Wemmer, D.E.
登録日2003-02-11
公開日2003-11-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Regulation of the transcriptional activator NtrC1: structural studies of the regulatory and AAA+ ATPase domains
Genes Dev., 17, 2003
1PUX
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NMR Solution Structure of BeF3-Activated Spo0F, 20 conformers
分子名称: Sporulation initiation phosphotransferase F
著者Gardino, A.K, Volkman, B.F, Cho, H.S, Lee, S.Y, Wemmer, D.E, Kern, D.
登録日2003-06-25
公開日2003-08-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The NMR solution structure of BeF(3)(-)-activated Spo0F reveals the conformational switch in a phosphorelay system.
J.Mol.Biol., 331, 2003
2M20
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EGFR transmembrane - juxtamembrane (TM-JM) segment in bicelles: MD guided NMR refined structure.
分子名称: Epidermal growth factor receptor
著者Endres, N.F, Das, R, Smith, A, Arkhipov, A, Kovacs, E, Huang, Y, Pelton, J.G, Shan, Y, Shaw, D.E, Wemmer, D.E, Groves, J.T, Kuriyan, J.
登録日2012-12-11
公開日2013-02-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Conformational Coupling across the Plasma Membrane in Activation of the EGF Receptor.
Cell(Cambridge,Mass.), 152, 2013
1FO5
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SOLUTION STRUCTURE OF REDUCED MJ0307
分子名称: THIOREDOXIN
著者Cave, J.W, Cho, H.S, Batchelder, A.M, Kim, R, Yokota, H, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
登録日2000-08-24
公開日2001-04-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution nuclear magnetic resonance structure of a protein disulfide oxidoreductase from Methanococcus jannaschii.
Protein Sci., 10, 2001
2JRL
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Solution structure of the beryllofluoride-activated NtrC4 receiver domain dimer
分子名称: Transcriptional regulator (NtrC family)
著者Lee, C, Hong, E, Doucleff, M, Pelton, J.G, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
登録日2007-06-27
公開日2008-07-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of the Beryllofluoride-Activated NtrC4 Receiver Domain Dimer.
To be Published
1DB6
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SOLUTION STRUCTURE OF THE DNA APTAMER 5'-CGACCAACGTGTCGCCTGGTCG-3' COMPLEXED WITH ARGININAMIDE
分子名称: ARGININEAMIDE, DNA
著者Robertson, S.A, Harada, K, Frankel, A.D, Wemmer, D.E.
登録日1999-11-02
公開日2000-02-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure determination and binding kinetics of a DNA aptamer-argininamide complex.
Biochemistry, 39, 2000
1I9F
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STRUCTURAL CHARACTERIZATION OF THE COMPLEX OF THE REV RESPONSE ELEMENT RNA WITH A SELECTED PEPTIDE
分子名称: REV RESPONSE ELEMENT RNA, RSG-1.2 PEPTIDE
著者Zhang, Q, Harada, K, Cho, H.S, Frankel, A, Wemmer, D.E.
登録日2001-03-19
公開日2001-05-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural characterization of the complex of the Rev response element RNA with a selected peptide.
Chem.Biol., 8, 2001

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