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PDB: 62 件
4G3K
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Crystal structure of a. aeolicus nlh1 gaf domain in an inactive state
分子名称: Transcriptional regulator nlh1
著者Wemmer, D.E, Batchelor, J.D, Wang, A, Lee, P, Doucleff, M.
登録日2012-07-14
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus
J.Mol.Biol., 425, 2013
204D
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BU of 204d by Molmil
THE SOLUTION STRUCTURES OF PSORALEN MONOADDUCTED AND CROSSLINKED DNA OLIGOMERS BY NMR SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
分子名称: 4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN, DNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3')
著者Spielmann, H.P, Dwyer, T.J, Hearst, J.E, Wemmer, D.E.
登録日1995-04-06
公開日1995-09-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structures of psoralen monoadducted and cross-linked DNA oligomers by NMR spectroscopy and restrained molecular dynamics.
Biochemistry, 34, 1995
203D
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THE SOLUTION STRUCTURES OF PSORALEN MONOADDUCTED AND CROSSLINKED DNA OLIGOMERS BY NMR SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS
分子名称: 4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN, DNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3')
著者Spielmann, H.P, Dwyer, T.J, Hearst, J.E, Wemmer, D.E.
登録日1995-04-06
公開日1995-09-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structures of psoralen monoadducted and cross-linked DNA oligomers by NMR spectroscopy and restrained molecular dynamics.
Biochemistry, 34, 1995
3HSF
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BU of 3hsf by Molmil
HEAT SHOCK TRANSCRIPTION FACTOR (HSF)
分子名称: HEAT SHOCK TRANSCRIPTION FACTOR
著者Damberger, F.F, Pelton, J.G, Liu, C, Cho, H, Harrison, C.J, Nelson, H.C.M, Wemmer, D.E.
登録日1995-08-07
公開日1995-11-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Refined solution structure and dynamics of the DNA-binding domain of the heat shock factor from Kluyveromyces lactis.
J.Mol.Biol., 254, 1995
3GT8
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Crystal structure of the inactive EGFR kinase domain in complex with AMP-PNP
分子名称: Epidermal growth factor receptor, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Jura, N, Endres, N.F, Engel, K, Deindl, S, Das, R, Lamers, M.H, Wemmer, D.E, Zhang, X, Kuriyan, J.
登録日2009-03-27
公開日2009-07-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.955 Å)
主引用文献Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment.
Cell(Cambridge,Mass.), 137, 2009
2BBI
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BU of 2bbi by Molmil
THREE-DIMENSIONAL STRUCTURE OF SOYBEAN TRYPSIN(SLASH)CHYMOTRYPSIN BOWMAN-BIRK INHIBITOR IN SOLUTION
分子名称: TRYPSIN/CHYMOTRYPSIN BOWMAN-BIRK INHIBITOR
著者Werner, M.H, Wemmer, D.E.
登録日1991-09-19
公開日1993-10-31
最終更新日2024-10-23
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of soybean trypsin/chymotrypsin Bowman-Birk inhibitor in solution.
Biochemistry, 31, 1992
108D
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BU of 108d by Molmil
THE SOLUTION STRUCTURE OF A DNA COMPLEX WITH THE FLUORESCENT BIS INTERCALATOR TOTO DETERMINED BY NMR SPECTROSCOPY
分子名称: 1,1-(4,4,8,8-TETRAMETHYL-4,8-DIAZAUNDECAMETHYLENE)-BIS-4-3-METHYL-2,3-DIHYDRO-(BENZO-1,3-THIAZOLE)-2-METHYLIDENE)-QUINOLINIUM, DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3')
著者Spielmann, H.P, Wemmer, D.E, Jacobsen, J.P.
登録日1995-01-31
公開日1995-06-03
最終更新日2024-03-13
実験手法SOLUTION NMR
主引用文献Solution structure of a DNA complex with the fluorescent bis-intercalator TOTO determined by NMR spectroscopy.
Biochemistry, 34, 1995
4G3W
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BU of 4g3w by Molmil
Crystal structure of a. aeolicus nlh1 gaf domain in an inactive state
分子名称: Transcriptional regulator nlh1
著者Batchelor, J.D, Wang, A, Lee, P, Doucleff, M, Wemmer, D.E.
登録日2012-07-15
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus
J.Mol.Biol., 425, 2013
4FTH
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BU of 4fth by Molmil
Crystal Structure of NtrC4 DNA-binding domain bound to double-stranded DNA
分子名称: 5'-D(*AP*CP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*GP*CP*AP*T)-3', 5'-D(P*GP*AP*TP*GP*CP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*A)-3', Transcriptional regulator (NtrC family)
著者Vidangos, N.K, Heideker, J, Lyubimov, A.Y, Lamers, M, Huo, Y, Pelton, J.G, Ton, J, Gralla, J.D, Kuriyan, J, Berger, J.M, Wemmer, D.E.
登録日2012-06-27
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.004 Å)
主引用文献DNA Recognition by a sigma (54) Transcriptional Activator from Aquifex aeolicus.
J.Mol.Biol., 426, 2014
4G3V
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BU of 4g3v by Molmil
Crystal structure of A. Aeolicus nlh2 gaf domain in an inactive state
分子名称: CHLORIDE ION, Transcriptional regulator nlh2
著者Batchelor, J.D, Lee, P, Wang, A, Doucleff, M, Wemmer, D.E.
登録日2012-07-15
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural mechanism of GAF-regulated delta(54) activators from Aquifex aeolicus
J.Mol.Biol., 425, 2013
4L5E
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BU of 4l5e by Molmil
Crystal structure of A. aeolicus NtrC1 DNA binding domain
分子名称: SULFATE ION, Transcriptional regulator (NtrC family)
著者Young, A, Maris, A.E, Vidangos, N.K, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E.
登録日2013-06-10
公開日2013-08-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013
4L9U
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Structure of C-terminal coiled coil of RasGRP1
分子名称: GLYCEROL, RAS guanyl-releasing protein 1, SULFATE ION
著者Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J.
登録日2013-06-18
公開日2013-08-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6014 Å)
主引用文献Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
4L9M
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Autoinhibited state of the Ras-specific exchange factor RasGRP1
分子名称: CITRIC ACID, GLYCEROL, RAS guanyl-releasing protein 1, ...
著者Iwig, J.S, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J.G, Wemmer, D.E, Roose, J.P, Kuriyan, J.
登録日2013-06-18
公開日2013-08-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1.
Elife, 2, 2013
4L4U
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BU of 4l4u by Molmil
Crystal structure of construct containing A. aeolicus NtrC1 receiver, central and DNA binding domains
分子名称: Transcriptional regulator (NtrC family)
著者Vidangos, N.K, Maris, A.E, Young, A, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E.
登録日2013-06-09
公開日2013-08-28
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators.
Biopolymers, 99, 2013
1BBI
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BU of 1bbi by Molmil
THREE-DIMENSIONAL STRUCTURE OF SOYBEAN TRYPSIN(SLASH)CHYMOTRYPSIN BOWMAN-BIRK INHIBITOR IN SOLUTION
分子名称: TRYPSIN/CHYMOTRYPSIN BOWMAN-BIRK INHIBITOR
著者Werner, M.H, Wemmer, D.E.
登録日1991-09-19
公開日1993-10-31
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of soybean trypsin/chymotrypsin Bowman-Birk inhibitor in solution.
Biochemistry, 31, 1992
1ZDM
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BU of 1zdm by Molmil
Crystal Structure of Activated CheY Bound to Xe
分子名称: Chemotaxis protein cheY, MANGANESE (II) ION, XENON
著者Lowery, T.J, Doucleff, M, Ruiz, E.J, Rubin, S.M, Pines, A, Wemmer, D.E.
登録日2005-04-14
公開日2005-04-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Distinguishing multiple chemotaxis Y protein conformations with laser-polarized 129Xe NMR.
Protein Sci., 14, 2005
2AHQ
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BU of 2ahq by Molmil
Solution Structure of the C-terminal RpoN Domain of Sigma-54 from Aquifex aeolicus
分子名称: RNA polymerase sigma factor RpoN
著者Doucleff, M, Malak, L.T, Pelton, J.G, Wemmer, D.E.
登録日2005-07-28
公開日2005-10-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The C-terminal RpoN domain of sigma54 forms an unpredicted helix-turn-helix motif similar to domains of sigma70.
J.Biol.Chem., 280, 2005
1F4V
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BU of 1f4v by Molmil
CRYSTAL STRUCTURE OF ACTIVATED CHEY BOUND TO THE N-TERMINUS OF FLIM
分子名称: BERYLLIUM TRIFLUORIDE ION, CHEMOTAXIS CHEY PROTEIN, FLAGELLAR MOTOR SWITCH PROTEIN, ...
著者Lee, S.Y, Cho, H.S, Pelton, J.G, Yan, D, Henderson, R.K, King, D, Huang, L.S, Kustu, S, Berry, E.A, Wemmer, D.E.
登録日2000-06-10
公開日2001-01-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Crystal structure of an activated response regulator bound to its target.
Nat.Struct.Biol., 8, 2001
1SXL
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BU of 1sxl by Molmil
RESONANCE ASSIGNMENTS AND SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN OF SEX-LETHAL DETERMINED BY MULTIDIMENSIONAL HETERONUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
分子名称: SEX-LETHAL PROTEIN PROTEIN
著者Lee, A.L, Kanaar, R, Rio, D.C, Wemmer, D.E.
登録日1994-07-01
公開日1994-09-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Resonance assignments and solution structure of the second RNA-binding domain of sex-lethal determined by multidimensional heteronuclear magnetic resonance.
Biochemistry, 33, 1994
1RLT
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BU of 1rlt by Molmil
Transition State Analogue of ybiV from E. coli K12
分子名称: ACETATE ION, ALUMINUM FLUORIDE, GLYCEROL, ...
著者Roberts, A, Lee, S.Y, McCullagh, E, Silversmith, R.E, Wemmer, D.E.
登録日2003-11-26
公開日2004-12-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Ybiv from Escherichia coli K12 is a HAD phosphatase.
Proteins, 58, 2005
1RLM
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Crystal Structure of ybiV from Escherichia coli K12
分子名称: GLYCEROL, MAGNESIUM ION, Phosphatase
著者Roberts, A, Lee, S.Y, McCullagh, E, Silversmith, R.E, Wemmer, D.E.
登録日2003-11-26
公開日2004-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Ybiv from Escherichia coli K12 is a HAD phosphatase.
Proteins, 58, 2005
1RLO
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BU of 1rlo by Molmil
Phospho-aspartyl Intermediate Analogue of ybiV from E. coli K12
分子名称: GLYCEROL, MAGNESIUM ION, Phosphatase
著者Roberts, A, Lee, S.Y, McCullagh, E, Silversmith, R.E, Wemmer, D.E.
登録日2003-11-26
公開日2004-12-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ybiv from Escherichia coli K12 is a HAD phosphatase.
Proteins, 58, 2005
1TM9
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BU of 1tm9 by Molmil
NMR Structure of gene target number gi3844938 from Mycoplasma genitalium: Berkeley Structural Genomics Center
分子名称: Hypothetical protein MG354
著者Pelton, J.G, Shi, J, Yokota, H, Kim, R, Wemmer, D.E, Berkeley Structural Genomics Center (BSGC)
登録日2004-06-10
公開日2004-08-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Structure of Gene Target gi3844938 from Mycoplasma genitalium
To be Published
1J56
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BU of 1j56 by Molmil
MINIMIZED AVERAGE STRUCTURE OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN: MODEL STRUCTURE INCORPORATING ACTIVE SITE CONTACTS
分子名称: BERYLLIUM TRIFLUORIDE ION, NITROGEN REGULATION PROTEIN NR(I)
著者Hastings, C.A, Lee, S.-Y, Cho, H.S, Yan, D, Kustu, S, Wemmer, D.E.
登録日2002-01-10
公開日2003-08-19
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献High-Resolution Solution Structure of the Beryllofluoride-Activated NtrC Receiver Domain
Biochemistry, 42, 2003
1KRX
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SOLUTION STRUCTURE OF BERYLLOFLUORIDE-ACTIVATED NTRC RECEIVER DOMAIN: MODEL STRUCTURES INCORPORATING ACTIVE SITE CONTACTS
分子名称: BERYLLIUM TRIFLUORIDE ION, NITROGEN REGULATION PROTEIN NR(I)
著者Hastings, C.A, Lee, S.-Y, Cho, H.S, Yan, D, Kustu, S, Wemmer, D.E.
登録日2002-01-10
公開日2003-08-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献High-Resolution Solution Structure of the Beryllofluoride-Activated NtrC Receiver Domain
Biochemistry, 42, 2003

 

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