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PDB: 410 件

8OLG
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DI2 Abeta fibril from tg-SwDI mouse
分子名称: Amyloid-beta protein 42
著者Zielinski, M, Peralta Reyes, F.S, Gremer, L, Schemmert, S, Frieg, B, Willuweit, A, Donner, L, Elvers, M, Nilsson, L.N.G, Syvanen, S, Sehlin, D, Ingelsson, M, Willbold, D, Schroeder, G.F.
登録日2023-03-30
公開日2023-11-29
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM of A beta fibrils from mouse models find tg-APP ArcSwe fibrils resemble those found in patients with sporadic Alzheimer's disease.
Nat.Neurosci., 26, 2023
5D1M
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Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 (P199A)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase RNF25, ...
著者Liang, Y.-H, Li, S, Weissman, A.M, Ji, X.
登録日2015-08-04
公開日2015-10-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.581 Å)
主引用文献Insights into Ubiquitination from the Unique Clamp-like Binding of the RING E3 AO7 to the E2 UbcH5B.
J.Biol.Chem., 290, 2015
5ICQ
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Methanobactin periplasmic binding protein
分子名称: Methylocystis parvus OBBP MbnE, SULFATE ION
著者Dassama, L.M.K, Rosenzweig, A.C.
登録日2016-02-23
公開日2016-10-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Methanobactin transport machinery.
Proc.Natl.Acad.Sci.USA, 113, 2016
6RH3
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Cryo-EM structure of E. coli RNA polymerase elongation complex bound to CTP substrate
分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Abdelkareem, M, Saint-Andre, C, Takacs, M, Papai, G, Crucifix, C, Guo, X, Ortiz, J, Weixlbaumer, A.
登録日2019-04-18
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural Basis of Transcription: RNA Polymerase Backtracking and Its Reactivation.
Mol.Cell, 75, 2019
5WBC
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BU of 5wbc by Molmil
Designed Artificial Cupredoxins - WT
分子名称: ACETATE ION, GLYCEROL, Streptavidin, ...
著者Mann, S.I, Heinisch, T, Weitz, A.C, Hendrich, M.R, Ward, T.R, Borovik, A.S.
登録日2017-06-28
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Modular Artificial Cupredoxins.
J. Am. Chem. Soc., 138, 2016
5WDI
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Structure of Human Sts-2 histidine phosphatase domain
分子名称: SULFATE ION, Ubiquitin-associated and SH3 domain-containing protein A
著者Zhou, W, Yin, Y, Weinheimer, A.W, Kaur, N, Carpino, N, French, J.B.
登録日2017-07-05
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural and Functional Characterization of the Histidine Phosphatase Domains of Human Sts-1 and Sts-2.
Biochemistry, 56, 2017
5W5G
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Structure of Human Sts-1 histidine phosphatase domain
分子名称: Ubiquitin-associated and SH3 domain-containing protein B
著者Zhou, W, Yin, Y, Weinheimer, A.W, Kaur, N, Carpino, N, French, J.B.
登録日2017-06-15
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural and Functional Characterization of the Histidine Phosphatase Domains of Human Sts-1 and Sts-2.
Biochemistry, 56, 2017
8OYI
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particulate methane monooxygenase with 2,2,2-trifluoroethanol bound
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-04
公開日2023-11-08
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.19 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
6FLQ
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CryoEM structure of E.coli RNA polymerase paused elongation complex bound to NusA
分子名称: DNA (31-MER), DNA (39-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Guo, X, Weixlbaumer, A.
登録日2018-01-26
公開日2018-03-21
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural Basis for NusA Stabilized Transcriptional Pausing.
Mol. Cell, 69, 2018
6HAM
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BU of 6ham by Molmil
Adenylate kinase
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
著者Kantaev, R, Inbal, R, Goldenzweig, A, Barak, Y, Dym, O, Peleg, Y, Albek, S, Fleishman, S.J, Haran, G.
登録日2018-08-08
公開日2019-08-28
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Manipulating the Folding Landscape of a Multidomain Protein.
J.Phys.Chem.B, 122, 2018
6HAP
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Adenylate kinase
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
著者Kantaev, R, Inbal, R, Goldenzweig, A, Barak, Y, Dym, O, Peleg, Y, Albek, S, Fleishman, S.J, Haran, G.
登録日2018-08-08
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Manipulating the Folding Landscape of a Multidomain Protein.
J.Phys.Chem.B, 122, 2018
6CPD
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Crystal structure of PmoD soluble domain from Methylocystis sp. ATCC 49242 (Rockwell)
分子名称: COPPER (I) ION, PmoD, SULFATE ION
著者Fisher, O.S, Rosenzweig, A.C.
登録日2018-03-13
公開日2018-10-31
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Characterization of a long overlooked copper protein from methane- and ammonia-oxidizing bacteria.
Nat Commun, 9, 2018
6DAM
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Crystal structure of lanthanide-dependent methanol dehydrogenase XoxF from Methylomicrobium buryatense 5G
分子名称: LANTHANUM (III) ION, Lanthanide-dependent methanol dehydrogenase XoxF, PYRROLOQUINOLINE QUINONE, ...
著者Deng, Y, Ro, S.Y, Rosenzweig, A.C.
登録日2018-05-01
公開日2018-09-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and function of the lanthanide-dependent methanol dehydrogenase XoxF from the methanotroph Methylomicrobium buryatense 5GB1C.
J. Biol. Inorg. Chem., 23, 2018
4YDX
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BU of 4ydx by Molmil
Crystal structure of cisplatin bound to a human copper chaperone (monomer) - new refinement
分子名称: 3,3',3''-phosphanetriyltripropanoic acid, Copper transport protein ATOX1, PLATINUM (II) ION, ...
著者Shabalin, I.G, Boal, A.K, Dauter, Z, Jaskolski, M, Minor, W, Rosenzweig, A.C, Wlodawer, A.
登録日2015-02-23
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin.
Acta Crystallogr.,Sect.D, 71, 2015
6E1C
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BU of 6e1c by Molmil
Crystal structure of a MauG-like protein associated with microbial copper homeostasis
分子名称: CALCIUM ION, Di-heme enzyme, HEME C
著者Dassama, L.M.K, Rosenzweig, A.C.
登録日2018-07-09
公開日2019-07-17
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (2.617 Å)
主引用文献MbnH is a diheme MauG-like protein associated with microbial copper homeostasis.
J.Biol.Chem., 294, 2019
1WQ1
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BU of 1wq1 by Molmil
RAS-RASGAP COMPLEX
分子名称: ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, H-RAS, ...
著者Scheffzek, K, Ahmadian, M.R, Kabsch, W, Wiesmueller, L, Lautwein, A, Schmitz, F, Wittinghofer, A.
登録日1997-07-03
公開日1998-07-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Ras-RasGAP complex: structural basis for GTPase activation and its loss in oncogenic Ras mutants.
Science, 277, 1997
6FOG
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BU of 6fog by Molmil
X-ray structure of homo sapiens Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) in complex with inhibitor oxalate at 1.94A resolution.
分子名称: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
著者Naschberger, A, Weiss, A.K.H.
登録日2018-02-07
公開日2018-11-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural basis for the bi-functionality of human oxaloacetate decarboxylase FAHD1.
Biochem. J., 475, 2018
6FOH
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X-ray structure of homo sapiens Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) at 1.56A resolution.
分子名称: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
著者Naschberger, A, Weiss, A.K.H.
登録日2018-02-07
公開日2018-11-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural basis for the bi-functionality of human oxaloacetate decarboxylase FAHD1.
Biochem. J., 475, 2018
1AIO
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BU of 1aio by Molmil
CRYSTAL STRUCTURE OF A DOUBLE-STRANDED DNA CONTAINING THE MAJOR ADDUCT OF THE ANTICANCER DRUG CISPLATIN
分子名称: Cisplatin, DNA (5'-D(*CP*CP*(BRU)P*CP*TP*[PT(NH3)2(GP*GP)]*TP*CP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3')
著者Takahara, P.M, Rosenzweig, A.C, Frederick, C.A, Lippard, S.J.
登録日1997-04-23
公開日1997-04-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of double-stranded DNA containing the major adduct of the anticancer drug cisplatin.
Nature, 377, 1995
1X8N
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1.08 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Complexed With Nitric Oxide at pH 7.4
分子名称: NITRIC OXIDE, Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE
著者Kondrashov, D.A, Roberts, S.A, Weichsel, A, Montfort, W.R.
登録日2004-08-18
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding
Biochemistry, 43, 2004
1X8O
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1.01 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Complexed With Nitric Oxide at pH 5.6
分子名称: NITRIC OXIDE, Nitrophorin 4, PHOSPHATE ION, ...
著者Kondrashov, D.A, Roberts, S.A, Weichsel, A, Montfort, W.R.
登録日2004-08-18
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding
Biochemistry, 43, 2004
1X8Q
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0.85 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus in Complex with Water at pH 5.6
分子名称: Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE
著者Kondrashov, D.A, Roberts, S.A, Weichsel, A, Montfort, W.R.
登録日2004-08-18
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding
Biochemistry, 43, 2004
6FVT
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26S proteasome, s1 state
分子名称: 26S proteasome complex subunit SEM1, 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, ...
著者Eisele, M.R, Reed, R.G, Rudack, T, Schweitzer, A, Beck, F, Nagy, I, Pfeifer, G, Plitzko, J.M, Baumeister, W, Tomko, R.J, Sakata, E.
登録日2018-03-05
公開日2018-08-22
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Expanded Coverage of the 26S Proteasome Conformational Landscape Reveals Mechanisms of Peptidase Gating.
Cell Rep, 24, 2018
1U0X
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Crystal structure of nitrophorin 4 under pressure of xenon (200 psi)
分子名称: AMMONIA, Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Nienhaus, K, Maes, E.M, Weichsel, A, Montfort, W.R, Nienhaus, G.U.
登録日2004-07-14
公開日2004-07-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural dynamics controls nitric oxide affinity in nitrophorin 4
J.Biol.Chem., 279, 2004
6FVW
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26S proteasome, s4 state
分子名称: 26S proteasome complex subunit SEM1, 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, ...
著者Eisele, M.R, Reed, R.G, Rudack, T, Schweitzer, A, Beck, F, Nagy, I, Pfeifer, G, Plitzko, J.M, Baumeister, W, Tomko, R.J, Sakata, E.
登録日2018-03-05
公開日2018-08-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Expanded Coverage of the 26S Proteasome Conformational Landscape Reveals Mechanisms of Peptidase Gating.
Cell Rep, 24, 2018

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