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PDB: 833 results

4Y5K
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BU of 4y5k by Molmil
Endothiapepsin in complex with fragment 274
Descriptor: (1S)-2-amino-1-(4-fluorophenyl)ethanol, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-11
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.439 Å)
Cite:Crystallographic Fragment Sreening of an Entire Library
to be published
4Y5B
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BU of 4y5b by Molmil
Endothiapepsin in complex with fragment 261
Descriptor: 2-({[(1S)-1-cyclopropylethyl](methyl)amino}methyl)quinazolin-4(3H)-one, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-11
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Crystallographic Fragment Sreening of an Entire Library
to be published
8I3W
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BU of 8i3w by Molmil
BANAL-20-236 Spike trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Wang, X, Xu, G.
Deposit date:2023-01-18
Release date:2024-01-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:The selective effect of fecal-oral transmission on the S proteins of bat SARS-CoV-2 related coronaviruses in favor of stability over infectivity
To Be Published
4Y3R
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BU of 4y3r by Molmil
Endothiapepsin in complex with fragment 306
Descriptor: 2-chlorobenzyl carbamimidothioate, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-10
Release date:2016-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
To Be Published
4Y5C
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BU of 4y5c by Molmil
Endothiapepsin in complex with fragment 267
Descriptor: 2,5-dimethyl-N-(pyridin-4-yl)furan-3-carboxamide, ACETATE ION, Endothiapepsin, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-11
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Crystallographic Fragment Sreening of an Entire Library
to be published
4Y45
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BU of 4y45 by Molmil
Endothiapepsin in complex with fragment 291
Descriptor: ACETATE ION, DIMETHYL SULFOXIDE, Endothiapepsin, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-10
Release date:2016-02-17
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
To Be Published
4Y5G
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BU of 4y5g by Molmil
Endothiapepsin in complex with fragment 272
Descriptor: ACETATE ION, DIMETHYL SULFOXIDE, Endothiapepsin, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-11
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystallographic Fragment Sreening of an Entire Library
to be published
5YDG
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BU of 5ydg by Molmil
Crystal structure of the Arabidopsis thaliana chloroplast RNA editing factors 2(MORF2)
Descriptor: Multiple organellar RNA editing factor 2, chloroplastic
Authors:Wang, X, Yang, J.Y, Wang, Y.L, Gao, Y.S.
Deposit date:2017-09-13
Release date:2017-12-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Crystal structure of the chloroplast RNA editing factor MORF2
Biochem. Biophys. Res. Commun., 495, 2018
3J1P
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BU of 3j1p by Molmil
Atomic model of rabbit hemorrhagic disease virus
Descriptor: Major capsid protein VP60
Authors:Wang, X, Liu, Y, Sun, F.
Deposit date:2012-04-09
Release date:2013-01-30
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Atomic model of rabbit hemorrhagic disease virus by cryo-electron microscopy and crystallography.
Plos Pathog., 9, 2013
5B7I
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BU of 5b7i by Molmil
Cas3-AcrF3 complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, CRISPR-associated nuclease/helicase Cas3 subtype I-F/YPEST, ...
Authors:Wang, X, Zhu, Y.
Deposit date:2016-06-07
Release date:2016-07-06
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of Cas3 inhibition by the bacteriophage protein AcrF3
Nat.Struct.Mol.Biol., 23, 2016
5CO5
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BU of 5co5 by Molmil
Crystal structure of Ac-AChBP in complex with conotoxin GIC
Descriptor: Alpha-conotoxin GIC, Soluble acetylcholine receptor
Authors:Wang, X.Q, Xu, M.Y, Luo, S.L, Lin, B.
Deposit date:2015-07-19
Release date:2016-07-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Ac-AChBP in complex with conotoxin GIC
To Be Published
5DQR
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BU of 5dqr by Molmil
The crystal structure of Arabidopsis 7-hydroxymethyl chlorophyll a reductase (HCAR)
Descriptor: 7-hydroxymethyl chlorophyll a reductase, chloroplastic, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Wang, X, Liu, L.
Deposit date:2015-09-15
Release date:2016-04-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure and Catalytic Mechanism of 7-Hydroxymethyl Chlorophyll a Reductase
J.Biol.Chem., 291, 2016
8HXJ
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BU of 8hxj by Molmil
BANAL-20-52 Spike trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Wang, X, Xu, G.
Deposit date:2023-01-04
Release date:2024-01-10
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The selective effect of fecal-oral transmission on the S proteins of bat SARS-CoV-2 related coronaviruses in favor of stability over infectivity
To Be Published
5HLY
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BU of 5hly by Molmil
Structure of Pro-Activin A Precursor at 2.3 A Resolution
Descriptor: CHLORIDE ION, Inhibin beta A chain
Authors:Wang, X, Fischer, G, Hyvonen, M.
Deposit date:2016-01-15
Release date:2016-07-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structure and activation of pro-activin A.
Nat Commun, 7, 2016
6M0J
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BU of 6m0j by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain bound with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, CHLORIDE ION, ...
Authors:Wang, X, Lan, J, Ge, J, Yu, J, Shan, S.
Deposit date:2020-02-21
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor.
Nature, 581, 2020
3RT3
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BU of 3rt3 by Molmil
Complex of influenza virus protein with host anti-viral factor
Descriptor: Non-structural protein 1, SUCCINIC ACID, Ubiquitin-like protein ISG15
Authors:Wang, X.Q, Li, L.
Deposit date:2011-05-03
Release date:2011-07-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Crystal structure of human ISG15 in complex with influenza B virus NS1B
To be Published
8WPP
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BU of 8wpp by Molmil
Structure of monkeypox virus polymerase complex F8-A22-E4-H5 with endogenous DNA
Descriptor: A22R DNA polymerase processivity factor, DNA polymerase, E4R Uracil-DNA glycosylase, ...
Authors:Wang, X, Li, N, Gao, N.
Deposit date:2023-10-10
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the assembly and mechanism of mpox virus DNA polymerase complex F8-A22-E4-H5.
Mol.Cell, 83, 2023
8WPK
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BU of 8wpk by Molmil
Structure of monkeypox virus polymerase complex F8-A22-E4-H5 with exgenous DNA
Descriptor: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, DNA polymerase, DNA polymerase processivity factor, ...
Authors:Wang, X, Li, N, Gao, N.
Deposit date:2023-10-10
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural insights into the assembly and mechanism of mpox virus DNA polymerase complex F8-A22-E4-H5.
Mol.Cell, 83, 2023
8WPF
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BU of 8wpf by Molmil
Structure of monkeypox virus polymerase complex F8-A22-E4-H5 with exogenous DNA bearing one abasic site
Descriptor: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, A22R DNA polymerase processivity factor, DNA polymerase, ...
Authors:Wang, X, Li, N, Gao, N.
Deposit date:2023-10-10
Release date:2023-11-29
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into the assembly and mechanism of mpox virus DNA polymerase complex F8-A22-E4-H5.
Mol.Cell, 83, 2023
7YBI
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BU of 7ybi by Molmil
SARS-CoV-2 Mu variant spike (open state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-06-29
Release date:2023-07-12
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:SARS-CoV-2 lambda variant spike
To Be Published
7E9Q
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BU of 7e9q by Molmil
Cryo-EM structure of the SARS-CoV-2 S-6P in complex with 35B5 Fab(1 out RBD, state3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of 35B5 Fab, Light chain of 35B5 Fab, ...
Authors:Wang, X.F, Zhu, Y.Q.
Deposit date:2021-03-04
Release date:2022-03-09
Last modified:2022-09-21
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:A potent human monoclonal antibody with pan-neutralizing activities directly dislocates S trimer of SARS-CoV-2 through binding both up and down forms of RBD
Signal Transduct Target Ther, 7, 2022
7E9O
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BU of 7e9o by Molmil
Cryo-EM structure of the SARS-CoV-2 S-6P in complex with 35B5 Fab(3 up RBDs, state2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of 35B5 Fab, Light chain of 35B5 Fab, ...
Authors:Wang, X.F, Zhu, Y.Q.
Deposit date:2021-03-04
Release date:2022-03-09
Last modified:2022-09-21
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:A potent human monoclonal antibody with pan-neutralizing activities directly dislocates S trimer of SARS-CoV-2 through binding both up and down forms of RBD
Signal Transduct Target Ther, 7, 2022
6LLG
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BU of 6llg by Molmil
Crystal Structure of Fagopyrum esculentum M UGT708C1
Descriptor: BENZAMIDINE, SULFATE ION, UDP-glycosyltransferase 708C1
Authors:Wang, X, Liu, M.
Deposit date:2019-12-23
Release date:2020-09-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of theC-Glycosyltransferase UGT708C1 from Buckwheat Provide Insights into the Mechanism ofC-Glycosylation.
Plant Cell, 32, 2020
7E9N
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BU of 7e9n by Molmil
Cryo-EM structure of the SARS-CoV-2 S-6P in complex with 35B5 Fab(1 down RBD, state1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of 35B5 Fab, Light chain of 35B5 Fab, ...
Authors:Wang, X.F, Zhu, Y.Q.
Deposit date:2021-03-04
Release date:2022-04-06
Last modified:2022-09-21
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:A potent human monoclonal antibody with pan-neutralizing activities directly dislocates S trimer of SARS-CoV-2 through binding both up and down forms of RBD
Signal Transduct Target Ther, 7, 2022
6LLZ
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BU of 6llz by Molmil
Crystal Structure of Fagopyrum esculentum M UGT708C1 complexed with UDP-glucose
Descriptor: UDP-glycosyltransferase 708C1, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Wang, X, Liu, M.
Deposit date:2019-12-24
Release date:2020-09-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Crystal Structures of theC-Glycosyltransferase UGT708C1 from Buckwheat Provide Insights into the Mechanism ofC-Glycosylation.
Plant Cell, 32, 2020

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