Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1423 results

2Z3A
DownloadVisualize
BU of 2z3a by Molmil
Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus
Descriptor: ATP-dependent protease hslV
Authors:Rho, S.H, Park, H.H, Kang, G.B, Lim, Y.J, Kang, M.S, Lim, B.K, Seong, I.S, Chung, C.H, Wang, J, Eom, S.H.
Deposit date:2007-06-03
Release date:2008-03-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Bacillus subtilis CodW, a noncanonical HslV-like peptidase with an impaired catalytic apparatus
Proteins, 71, 2007
1BGW
DownloadVisualize
BU of 1bgw by Molmil
TOPOISOMERASE RESIDUES 410-1202,
Descriptor: TOPOISOMERASE
Authors:Berger, J.M, Gamblin, S.J, Harrison, S.C, Wang, J.C.
Deposit date:1996-02-20
Release date:1996-07-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and mechanism of DNA topoisomerase II.
Nature, 379, 1996
3SJJ
DownloadVisualize
BU of 3sjj by Molmil
RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the presence of Mn2+
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3', 5'-D(*TP*CP*AP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', ...
Authors:Wang, M, Wang, J, Konigsberg, W.H.
Deposit date:2011-06-21
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase.
Biochemistry, 50, 2011
3COO
DownloadVisualize
BU of 3coo by Molmil
The crystal structure of Reelin-N domain of F-spondin
Descriptor: Spondin-1
Authors:Tan, K, Lawler, J, Wang, J.H.
Deposit date:2008-03-28
Release date:2008-08-26
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the heparin-binding reelin-N domain of f-spondin.
J.Mol.Biol., 381, 2008
1EFG
DownloadVisualize
BU of 1efg by Molmil
THE CRYSTAL STRUCTURE OF ELONGATION FACTOR G COMPLEXED WITH GDP, AT 2.7 ANGSTROMS RESOLUTION
Descriptor: ELONGATION FACTOR G, GUANOSINE-5'-DIPHOSPHATE
Authors:Czworkowski, J, Wang, J, Steitz, T.A, Moore, P.B.
Deposit date:1994-10-17
Release date:1995-02-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of elongation factor G complexed with GDP, at 2.7 A resolution.
EMBO J., 13, 1994
1NJ1
DownloadVisualize
BU of 1nj1 by Molmil
Crystal structure of Prolyl-tRNA Synthetase from Methanothermobacter thermautotrophicus bound to cysteine sulfamoyl adenylate
Descriptor: 5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE, MAGNESIUM ION, Proline-tRNA Synthetase, ...
Authors:Kamtekar, S, Kennedy, W.D, Wang, J, Stathopoulos, C, Soll, D, Steitz, T.A.
Deposit date:2002-12-30
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The structural basis of cysteine aminoacylation of tRNAPro by prolyl-tRNA synthetases
Proc.Natl.Acad.Sci.USA, 100, 2003
1NJ5
DownloadVisualize
BU of 1nj5 by Molmil
Crystal structure of Prolyl-tRNA Synthetase from Methanothermobacter thermautotrophicus bound to proline sulfamoyl adenylate
Descriptor: '5'-O-(N-(L-PROLYL)-SULFAMOYL)ADENOSINE, MAGNESIUM ION, Proline-tRNA Synthetase, ...
Authors:Kamtekar, S, Kennedy, W.D, Wang, J, Stathopoulos, C, Soll, D, Steitz, T.A.
Deposit date:2002-12-30
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structural basis of cysteine aminoacylation of tRNAPro by prolyl-tRNA synthetases
Proc.Natl.Acad.Sci.USA, 100, 2003
1NJ8
DownloadVisualize
BU of 1nj8 by Molmil
Crystal Structure of Prolyl-tRNA Synthetase from Methanocaldococcus janaschii
Descriptor: Proline-tRNA Synthetase
Authors:Kamtekar, S, Kennedy, W.D, Wang, J, Stathopoulos, C, Soll, D, Steitz, T.A.
Deposit date:2002-12-30
Release date:2003-03-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structural basis of cysteine aminoacylation of tRNAPro by prolyl-tRNA synthetases
Proc.Natl.Acad.Sci.USA, 100, 2003
4E2K
DownloadVisualize
BU of 4e2k by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain
Descriptor: BENZAMIDINE, DNA primase
Authors:Rymer, R.U, Solorio, F.A, Clement, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-08
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012
4EDT
DownloadVisualize
BU of 4edt by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain bound to ppGpp and Manganese
Descriptor: BENZAMIDINE, DNA primase, GUANOSINE-5',3'-TETRAPHOSPHATE, ...
Authors:Rymer, R.U, Solorio, F.A, Chu, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-27
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012
4EDR
DownloadVisualize
BU of 4edr by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain bound to UTP and Manganese
Descriptor: BENZAMIDINE, DNA primase, MANGANESE (II) ION, ...
Authors:Rymer, R.U, Solorio, F.A, Chu, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-27
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012
3SPZ
DownloadVisualize
BU of 3spz by Molmil
DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA (Ca2+)
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine, 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3', 5'-D(P*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', ...
Authors:Xia, S, Konigsberg, W.H, Wang, J.
Deposit date:2011-07-04
Release date:2011-10-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase.
Biochemistry, 50, 2011
4EDV
DownloadVisualize
BU of 4edv by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain bound to pppGpp and Manganese
Descriptor: BENZAMIDINE, DNA primase, MANGANESE (II) ION, ...
Authors:Rymer, R.U, Solorio, F.A, Chu, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-27
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012
6J6K
DownloadVisualize
BU of 6j6k by Molmil
Apo-state streptavidin
Descriptor: Streptavidin
Authors:Fan, X, Wang, J, Lei, J.L, Wang, H.W.
Deposit date:2019-01-15
Release date:2019-05-29
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Single particle cryo-EM reconstruction of 52 kDa streptavidin at 3.2 Angstrom resolution.
Nat Commun, 10, 2019
3SPY
DownloadVisualize
BU of 3spy by Molmil
RB69 DNA Polymerase(L415A/L561A/S565G/Y567A) Ternary Complex with dUpCpp Opposite dA
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine, 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3', 5'-D(*TP*CP*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', ...
Authors:Xia, S, Konigsberg, W.H, Wang, J.
Deposit date:2011-07-04
Release date:2011-10-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase.
Biochemistry, 50, 2011
6J6J
DownloadVisualize
BU of 6j6j by Molmil
Biotin-bound streptavidin
Descriptor: BIOTIN, Streptavidin
Authors:Fan, X, Wang, J, Lei, J.L, Wang, H.W.
Deposit date:2019-01-15
Release date:2019-05-29
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Single particle cryo-EM reconstruction of 52 kDa streptavidin at 3.2 Angstrom resolution.
Nat Commun, 10, 2019
8J22
DownloadVisualize
BU of 8j22 by Molmil
Cryo-EM structure of FFAR2 complex bound with TUG-1375
Descriptor: (2R,4R)-2-(2-chlorophenyl)-3-[4-(3,5-dimethyl-1,2-oxazol-4-yl)phenyl]carbonyl-1,3-thiazolidine-4-carboxylic acid, Free fatty acid receptor 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Tai, L, Li, F, Sun, X, Tang, W, Wang, J.
Deposit date:2023-04-14
Release date:2024-01-24
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular recognition and activation mechanism of short-chain fatty acid receptors FFAR2/3.
Cell Res., 34, 2024
8J20
DownloadVisualize
BU of 8j20 by Molmil
Cryo-EM structure of FFAR3 bound with valeric acid and AR420626
Descriptor: (4R)-N-[2,5-bis(chloranyl)phenyl]-4-(furan-2-yl)-2-methyl-5-oxidanylidene-4,6,7,8-tetrahydro-1H-quinoline-3-carboxamide, Free fatty acid receptor 3, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Tai, L, Li, F, Sun, X, Tang, W, Wang, J.
Deposit date:2023-04-14
Release date:2024-01-24
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular recognition and activation mechanism of short-chain fatty acid receptors FFAR2/3.
Cell Res., 34, 2024
8J24
DownloadVisualize
BU of 8j24 by Molmil
Cryo-EM structure of FFAR2 complex bound with acetic acid
Descriptor: ACETATE ION, Free fatty acid receptor 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Tai, L, Li, F, Tang, W, Sun, X, Wang, J.
Deposit date:2023-04-14
Release date:2024-01-24
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Molecular recognition and activation mechanism of short-chain fatty acid receptors FFAR2/3.
Cell Res., 34, 2024
8J21
DownloadVisualize
BU of 8j21 by Molmil
Cryo-EM structure of FFAR3 complex bound with butyrate acid
Descriptor: Free fatty acid receptor 3, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Tai, L, Li, F, Sun, X, Tang, W, Wang, J.
Deposit date:2023-04-14
Release date:2024-01-24
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular recognition and activation mechanism of short-chain fatty acid receptors FFAR2/3.
Cell Res., 34, 2024
6JEA
DownloadVisualize
BU of 6jea by Molmil
crystal structure of a beta-N-acetylhexosaminidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-N-acetylhexosaminidase, ZINC ION
Authors:Chen, X, Wang, J.C, Liu, M.J, Yang, W.Y, Wang, Y.Z, Tang, R.P, Zhang, M.
Deposit date:2019-02-04
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.275 Å)
Cite:Crystallographic evidence for substrate-assisted catalysis of beta-N-acetylhexosaminidas from Akkermansia muciniphila.
Biochem. Biophys. Res. Commun., 511, 2019
6JE8
DownloadVisualize
BU of 6je8 by Molmil
crystal structure of a beta-N-acetylhexosaminidase
Descriptor: Beta-N-acetylhexosaminidase, FORMIC ACID, GLYCEROL, ...
Authors:Chen, X, Wang, J.C, Liu, M.J, Yang, W.Y, Wang, Y.Z, Tang, R.P, Zhang, M.
Deposit date:2019-02-04
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Crystallographic evidence for substrate-assisted catalysis of beta-N-acetylhexosaminidas from Akkermansia muciniphila.
Biochem. Biophys. Res. Commun., 511, 2019
7KFU
DownloadVisualize
BU of 7kfu by Molmil
Cas6-RT-Cas1--Cas2 complex
Descriptor: Cas2, Cas6-RT-Cas1
Authors:Hoel, C.M, Wang, J.Y, Doudna, J.A, Brohawn, S.G.
Deposit date:2020-10-14
Release date:2021-03-31
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural coordination between active sites of a CRISPR reverse transcriptase-integrase complex.
Nat Commun, 12, 2021
7KFT
DownloadVisualize
BU of 7kft by Molmil
Partial Cas6-RT-Cas1--Cas2 complex
Descriptor: Cas2, Cas6-RT-Cas1
Authors:Hoel, C.M, Wang, J.Y, Doudna, J.A, Brohawn, S.G.
Deposit date:2020-10-14
Release date:2021-03-31
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural coordination between active sites of a CRISPR reverse transcriptase-integrase complex.
Nat Commun, 12, 2021
6JEB
DownloadVisualize
BU of 6jeb by Molmil
crystal structure of a beta-N-acetylhexosaminidase
Descriptor: ACETAMIDE, Beta-N-acetylhexosaminidase, ZINC ION
Authors:Chen, X, Wang, J.C, Liu, M.J, Yang, W.Y, Wang, Y.Z, Tang, R.P, Zhang, M.
Deposit date:2019-02-05
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.498 Å)
Cite:Crystallographic evidence for substrate-assisted catalysis of beta-N-acetylhexosaminidas from Akkermansia muciniphila.
Biochem. Biophys. Res. Commun., 511, 2019

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon