Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 910 results

4ZNR
DownloadVisualize
BU of 4znr by Molmil
Crystal structure of Dln1 complexed with Man(alpha1-3)Man
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Jia, N, Jiang, Y.L, Cheng, W, Wang, H.W, Zhou, C.Z, Chen, Y.
Deposit date:2015-05-05
Release date:2016-01-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for receptor recognition and pore formation of a zebrafish aerolysin-like protein.
Embo Rep., 17, 2016
5DI0
DownloadVisualize
BU of 5di0 by Molmil
Crystal structure of Dln1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Jia, N, Jiang, Y.L, Cheng, W, Wang, H.W, Zhou, C.Z, Chen, Y.
Deposit date:2015-08-31
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for receptor recognition and pore formation of a zebrafish aerolysin-like protein.
Embo Rep., 17, 2016
2ZUG
DownloadVisualize
BU of 2zug by Molmil
Crystal structure of WSSV ICP11
Descriptor: ORF115 (WSSV285) (Wsv230)
Authors:Wang, A.H.-J, Wang, H.-C, Ko, T.-P, Lo, C.-F.
Deposit date:2008-10-17
Release date:2008-12-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:White spot syndrome virus protein ICP11: A histone-binding DNA mimic that disrupts nucleosome assembly
Proc.Natl.Acad.Sci.USA, 105, 2008
7CFU
DownloadVisualize
BU of 7cfu by Molmil
Crystal Structure of FMN-dependent Cysteine Decarboxylases SpaF
Descriptor: ARGININE, DNA/pantothenate metabolism flavoprotein, FLAVIN MONONUCLEOTIDE
Authors:Li, J, Lu, J, Wang, H, Zhu, J.
Deposit date:2020-06-28
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Characterization of FMN-dependent Cysteine Decarboxylases SPAF
To Be Published
3WX4
DownloadVisualize
BU of 3wx4 by Molmil
CRYSTAL STRUCTURE of T4 PHAGE ARN PROTEIN
Descriptor: Anti-restriction endonuclease
Authors:Ho, C.H, Wang, H.C, Ko, T.P, Wang, A.H.J.
Deposit date:2014-07-16
Release date:2014-08-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The T4 phage DNA mimic protein Arn inhibits the DNA binding activity of the bacterial histone-like protein H-NS
J.Biol.Chem., 289, 2014
3WUR
DownloadVisualize
BU of 3wur by Molmil
Structure of DMP19 Complex with 18-crown-6
Descriptor: 1,2-ETHANEDIOL, 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, L(+)-TARTARIC ACID, ...
Authors:Lee, C.C, Wang, H.C, Wang, A.H.J.
Deposit date:2014-05-02
Release date:2014-10-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crowning proteins: modulating the protein surface properties using crown ethers.
Angew.Chem.Int.Ed.Engl., 53, 2014
2KUT
DownloadVisualize
BU of 2kut by Molmil
Solution Structure of GmR58A from Geobacter metallireducens. Northeast Structural Genomics Consortium Target GmR58A
Descriptor: Uncharacterized protein
Authors:Lee, H, Wang, H, Buchwald, W.A, Janjua, H, Nair, R, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Prestegard, J.H, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-02-28
Release date:2010-03-23
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution Structure of GmR58A
To be Published
7YPN
DownloadVisualize
BU of 7ypn by Molmil
Crystal structure of transaminase CC1012 mutant M9 complexed with PLP
Descriptor: 1,2-ETHANEDIOL, Aspartate aminotransferase family protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Yang, L, Wang, H, Wei, D.
Deposit date:2022-08-03
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Mechanism-Guided Computational Design of omega-Transaminase by Reprograming of High-Energy-Barrier Steps.
Angew.Chem.Int.Ed.Engl., 61, 2022
7YPM
DownloadVisualize
BU of 7ypm by Molmil
Crystal structure of transaminase CC1012 complexed with PLP and L-alanine
Descriptor: 1,2-ETHANEDIOL, ALANINE, Aspartate aminotransferase family protein, ...
Authors:Yang, L, Wang, H, Wei, D.
Deposit date:2022-08-03
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Mechanism-Guided Computational Design of omega-Transaminase by Reprograming of High-Energy-Barrier Steps.
Angew.Chem.Int.Ed.Engl., 61, 2022
2LPK
DownloadVisualize
BU of 2lpk by Molmil
Solution NMR of the specialized apo-acyl carrier protein (RPA2022) from Rhodopseudomonas palustris, Northeast Structural Genomics Consortium Target RpR324
Descriptor: Specialized acyl carrier protein
Authors:Ramelot, T.A, Rossi, P, Yang, Y, Lee, H, Ertekin, A, Wang, H, Ciccosanti, C, Kohan, E, Maglaqui, M, Janjua, H, Nair, R, Rost, B, Acton, T.B, Xiao, R, Everett, J.K, Prestegard, J.H, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-02-14
Release date:2012-02-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a specialized acyl carrier protein essential for lipid A biosynthesis with very long-chain fatty acids in open and closed conformations.
Biochemistry, 51, 2012
7O4Z
DownloadVisualize
BU of 7o4z by Molmil
Crystal structure of the carbonic anhydrase-like domain of CcmM from Synechococcus elongatus (strain PCC 7942)
Descriptor: CHLORIDE ION, Carboxysome assembly protein CcmM, NICKEL (II) ION
Authors:Zang, K, Wang, H, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2021-04-07
Release date:2021-11-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Scaffolding protein CcmM directs multiprotein phase separation in beta-carboxysome biogenesis.
Nat.Struct.Mol.Biol., 28, 2021
7O54
DownloadVisualize
BU of 7o54 by Molmil
Crystal structure of the carbonic anhydrase-like domain of CcmM in complex with the C-terminal 17 residues of CcaA from Synechococcus elongatus (strain PCC 7942)
Descriptor: CHLORIDE ION, Carbonic anhydrase, Carboxysome assembly protein CcmM, ...
Authors:Zang, K, Wang, H, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2021-04-07
Release date:2021-11-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Scaffolding protein CcmM directs multiprotein phase separation in beta-carboxysome biogenesis.
Nat.Struct.Mol.Biol., 28, 2021
7TN4
DownloadVisualize
BU of 7tn4 by Molmil
Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 3-diphosphoinositol 1,2,4,5-tetrakisphosphate (3-PP-IP4), Mg and Fluoride ion
Descriptor: (1R,2S,3R,4R,5S,6S)-4-hydroxy-2,3,5,6-tetrakis(phosphonooxy)cyclohexyl trihydrogen diphosphate, CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, ...
Authors:Zong, G, Wang, H, Shears, S.B.
Deposit date:2022-01-20
Release date:2022-06-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and catalytic analyses of the InsP 6 kinase activities of higher plant ITPKs.
Faseb J., 36, 2022
8BVW
DownloadVisualize
BU of 8bvw by Molmil
RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W)
Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
Authors:Abril-Garrido, J, Dienemann, C, Grabbe, F, Velychko, T, Lidschreiber, M, Wang, H, Cramer, P.
Deposit date:2022-12-20
Release date:2023-05-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Mol.Cell, 83, 2023
2LTD
DownloadVisualize
BU of 2ltd by Molmil
Solution NMR Structure of apo YdbC from Lactococcus lactis, Northeast Structural Genomics Consortium (NESG) Target KR150
Descriptor: Uncharacterized protein ydbC
Authors:Rossi, P, Barbieri, C.M, Aramini, J.M, Bini, E, Lee, H, Janjua, H, Ciccosanti, C, Wang, H, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-05-16
Release date:2012-06-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structures of apo- and ssDNA-bound YdbC from Lactococcus lactis uncover the function of protein domain family DUF2128 and expand the single-stranded DNA-binding domain proteome.
Nucleic Acids Res., 41, 2013
2LTT
DownloadVisualize
BU of 2ltt by Molmil
Solution NMR Structure of YdbC:dT19G1 complex. Northeast Structural Genomics Consortium (NESG) Target KR150
Descriptor: DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Putative uncharacterized protein ydbC
Authors:Rossi, P, Barbieri, C.M, Aramini, J.A, Bini, E, Lee, H, Janjua, H, Ciccosanti, C, Wang, H, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-05-31
Release date:2012-06-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structures of apo- and ssDNA-bound YdbC from Lactococcus lactis uncover the function of protein domain family DUF2128 and expand the single-stranded DNA-binding domain proteome.
Nucleic Acids Res., 41, 2013
1YD2
DownloadVisualize
BU of 1yd2 by Molmil
Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant Y19F bound to the catalytic divalent cation
Descriptor: GLYCEROL, MANGANESE (II) ION, UvrABC system protein C
Authors:Truglio, J.J, Rhau, B, Croteau, D.L, Wang, L, Skorvaga, M, Karakas, E, DellaVecchia, M.J, Wang, H, Van Houten, B, Kisker, C.
Deposit date:2004-12-23
Release date:2005-03-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the first incision reaction during nucleotide excision repair
Embo J., 24, 2005
1YD6
DownloadVisualize
BU of 1yd6 by Molmil
Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Bacillus caldotenax
Descriptor: CHLORIDE ION, SULFATE ION, UvrC
Authors:Truglio, J.J, Rhau, B, Croteau, D.L, Wang, L, Skorvaga, M, Karakas, E, DellaVecchia, M.J, Wang, H, Van Houten, B, Kisker, C.
Deposit date:2004-12-23
Release date:2005-03-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the first incision reaction during nucleotide excision repair
Embo J., 24, 2005
1YD3
DownloadVisualize
BU of 1yd3 by Molmil
Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant Y43F bound to its catalytic divalent cation
Descriptor: GLYCEROL, MANGANESE (II) ION, UvrABC system protein C
Authors:Truglio, J.J, Rhau, B, Croteau, D.L, Wang, L, Skorvaga, M, Karakas, E, DellaVecchia, M.J, Wang, H, Van Houten, B, Kisker, C.
Deposit date:2004-12-23
Release date:2005-03-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the first incision reaction during nucleotide excision repair
Embo J., 24, 2005
5GTX
DownloadVisualize
BU of 5gtx by Molmil
Crystal structure of mutated buckwheat glutaredoxin
Descriptor: buckwheat glutaredoxin
Authors:Zhang, X, Wang, W, Zhao, Y, Wang, Z, Wang, H.
Deposit date:2016-08-23
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural insights into the binding of buckwheat glutaredoxin with GSH and regulation of its catalytic activity
J. Inorg. Biochem., 173, 2017
8W6S
DownloadVisualize
BU of 8w6s by Molmil
Ferritin from Ureaplasma diversum soaking in Fe2+ solution for 2 min
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-29
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W7B
DownloadVisualize
BU of 8w7b by Molmil
Fe-O nanocluster of form-IV in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: FE (III) ION, Ferritin
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-30
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W7Q
DownloadVisualize
BU of 8w7q by Molmil
Fe-O nanocluster of form-VI in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-31
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8WPV
DownloadVisualize
BU of 8wpv by Molmil
Truncated mutant (1-171) of ferritin from Ureaplasma diversum soaked in Fe2+ solution for 30min
Descriptor: CHLORIDE ION, FE (III) ION, MAGNESIUM ION, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-10-10
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.059 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8WQU
DownloadVisualize
BU of 8wqu by Molmil
Fe-O nanocluster of form-IX in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: FE (III) ION, ferritin
Authors:Wang, W.M, Ma, D.Y, Gong, W.J, Wu, L.J, Wang, H.F.
Deposit date:2023-10-12
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024

224004

건을2024-08-21부터공개중

PDB statisticsPDBj update infoContact PDBjnumon