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PDB: 295 results

1AZP
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
Descriptor: DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3'), PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D)
Authors:Robinson, H, Gao, Y.-G, Mccrary, B.S, Edmondson, S.P, Shriver, J.W, Wang, A.H.-J.
Deposit date:1997-11-19
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The hyperthermophile chromosomal protein Sac7d sharply kinks DNA.
Nature, 392, 1998
1BE5
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STRUCTURAL STUDIES OF A STABLE PARALLEL-STRANDED DNA DUPLEX INCORPORATING ISOGUANINE:CYTOSINE AND ISOCYTOSINE:GUANINE BASE PAIRS BY NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: DNA DUPLEX (TGCACGGACT)
Authors:Yang, X.-L, Sugiyama, H, Ikeda, S, Saito, I, Wang, A.H.-J.
Deposit date:1998-05-19
Release date:1998-08-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural studies of a stable parallel-stranded DNA duplex incorporating isoguanine:cytosine and isocytosine:guanine basepairs by nuclear magnetic resonance spectroscopy.
Biophys.J., 75, 1998
440D
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HIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)
Descriptor: DNA (5'-D(*AP*GP*GP*GP*GP*CP*CP*CP*CP*T)-3')
Authors:Gao, Y.-G, Robinson, H.H, Wang, A.H.-J.
Deposit date:1999-01-13
Release date:1999-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution A-DNA crystal structures of d(AGGGGCCCCT). An A-DNA model of poly(dG) x poly(dC).
Eur.J.Biochem., 261, 1999
1BF4
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CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX
Descriptor: DNA (5'-D(*GP*CP*GP*AP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*5IUP*CP*GP*C)-3'), PROTEIN (CHROMOSOMAL PROTEIN SSO7D)
Authors:Su, S, Gao, Y.-G, Robinson, H, Padmanabhan, S, Lim, L, Shriver, J.W, Wang, A.H.-J.
Deposit date:1998-05-27
Release date:1999-11-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA.
Nat.Struct.Biol., 5, 1998
1BHR
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2'-DEOXY-ISOGUANOSINE BASE PAIRED TO THYMIDINE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: DNA (5'-D(*CP*GP*CP*IGUP*AP*AP*TP*TP*TP*GP*CP*G)-3')
Authors:Robinson, H, Gao, Y.-G, Bauer, C, Roberts, C, Switzer, C, Wang, A.H.-J.
Deposit date:1998-06-10
Release date:1998-11-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:2'-Deoxyisoguanosine adopts more than one tautomer to form base pairs with thymidine observed by high-resolution crystal structure analysis.
Biochemistry, 37, 1998
1BNZ
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SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX
Descriptor: 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3', DNA-BINDING PROTEIN 7A
Authors:Gao, Y.-G, Su, S.-Y, Robinson, H, Padmanabhan, S, Lim, L, Mccrary, B.S, Edmondos, S.P, Shrive, J.W, Wang, A.H.-J.
Deposit date:1998-07-31
Release date:1998-11-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA.
Nat.Struct.Biol., 5, 1998
4CWM
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High-glycosylation crystal structure of the bifunctional endonuclease (AtBFN2) from Arabidopsis thaliana
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDONUCLEASE 2, ZINC ION, ...
Authors:Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J.
Deposit date:2014-04-03
Release date:2014-07-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.
Plos One, 9, 2014
4CXO
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bifunctional endonuclease in complex with ssDNA
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, ENDONUCLEASE 2, SULFATE ION, ...
Authors:Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J.
Deposit date:2014-04-08
Release date:2014-07-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.
Plos One, 9, 2014
4BE5
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V. cholera biofilm scaffolding protein RbmA
Descriptor: GLYCEROL, RBMA, SODIUM ION
Authors:Maestre-Reyna, M, Wang, A.H.-J.
Deposit date:2013-03-06
Release date:2013-12-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural Insights Into Rbma, a Biofilm Scaffolding Protein of V. Cholerae.
Plos One, 8, 2013
4CXV
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Structure of bifunctional endonuclease (AtBFN2) in complex with phosphate.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDONUCLEASE 2, ...
Authors:Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J.
Deposit date:2014-04-09
Release date:2014-07-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.
Plos One, 9, 2014
4CXP
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Structure of bifunctional endonuclease (AtBFN2) from Arabidopsis thaliana in complex with sulfate
Descriptor: ENDONUCLEASE 2, PENTAETHYLENE GLYCOL, SULFATE ION, ...
Authors:Yu, T.-F, Maestre-Reyna, M, Ko, C.-Y, Ko, T.-P, Sun, Y.-J, Lin, T.-Y, Shaw, J.-F, Wang, A.H.-J.
Deposit date:2014-04-08
Release date:2014-07-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Structural Insights of the Ssdna Binding Site in the Multifunctional Endonuclease Atbfn2 from Arabidopsis Thaliana.
Plos One, 9, 2014
4BEI
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V. cholera biofilm scaffolding protein RbmA in complex with 18-crown- 6
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, DI(HYDROXYETHYL)ETHER, RBMA
Authors:Maestre-Reyna, M, Wang, A.H.-J.
Deposit date:2013-03-11
Release date:2013-12-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Insights Into Rbma, a Biofilm Scaffolding Protein of V. Cholerae.
Plos One, 8, 2013
4DNB
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BU of 4dnb by Molmil
METHYLATION OF THE ECORI RECOGNITION SITE DOES NOT ALTER DNA CONFORMATION. THE CRYSTAL STRUCTURE OF D(CGCGAM6ATTCGCG) AT 2.0 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*(6MA)P*TP*TP*CP*GP*CP*G)-3')
Authors:Frederick, C.A, Quigley, G.J, Van Der Marel, G.A, Van Boom, J.H, Wang, A.H.-J, Rich, A.
Deposit date:1988-08-29
Release date:1989-01-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Methylation of the EcoRI recognition site does not alter DNA conformation: the crystal structure of d(CGCGAm6ATTCGCG) at 2.0-A resolution.
J.Biol.Chem., 263, 1988
1CA6
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BU of 1ca6 by Molmil
INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
Descriptor: 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3', CHROMOSOMAL PROTEIN SAC7D
Authors:Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J.
Deposit date:1999-02-23
Release date:2000-02-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs
J.Mol.Biol., 303, 2000
1CA5
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INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
Descriptor: 5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3', CHROMOSOMAL PROTEIN SAC7D
Authors:Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J.
Deposit date:1999-02-23
Release date:2000-02-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs
J.Mol.Biol., 303, 2000
1D21
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BU of 1d21 by Molmil
BINDING OF THE ANTITUMOR DRUG NOGALAMYCIN AND ITS DERIVATIVES TO DNA: STRUCTURAL COMPARISON
Descriptor: DNA (5'-D(*(5CM)P*GP*TP*(AS)P*(5CM)P*G)-3'), NOGALAMYCIN
Authors:Gao, Y.-G, Liaw, Y.-C, Robinson, H, Wang, A.H.-J.
Deposit date:1990-08-08
Release date:1991-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Binding of the antitumor drug nogalamycin and its derivatives to DNA: structural comparison.
Biochemistry, 29, 1990
1D39
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COVALENT MODIFICATION OF GUANINE BASES IN DOUBLE STRANDED DNA: THE 1.2 ANGSTROMS Z-DNA STRUCTURE OF D(CGCGCG) IN THE PRESENCE OF CUCL2
Descriptor: COPPER (II) ION, DNA (5'-D(*CP*(CU)GP*CP*(CU)GP*CP*(CU)G)-3'), SODIUM ION
Authors:Kagawa, T.F, Geierstanger, B.H, Wang, A.H.-J, Ho, P.S.
Deposit date:1991-05-07
Release date:1992-04-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Covalent modification of guanine bases in double-stranded DNA. The 1.2-A Z-DNA structure of d(CGCGCG) in the presence of CuCl2.
J.Biol.Chem., 266, 1991
2ZY5
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BU of 2zy5 by Molmil
R487A mutant of L-aspartate beta-decarboxylase
Descriptor: L-aspartate beta-decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Chen, H.-J, Ko, T.-P, Lee, C.-Y, Wang, N.-C, Wang, A.H.-J.
Deposit date:2009-01-13
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure, Assembly, and Mechanism of a PLP-Dependent Dodecameric l-Aspartate beta-Decarboxylase
Structure, 17, 2009
2ZY2
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dodecameric L-aspartate beta-decarboxylase
Descriptor: L-aspartate 4-carboxylyase, PYRIDOXAL-5'-PHOSPHATE
Authors:Chen, H.-J, Ko, T.-P, Lee, C.-Y, Wang, N.-C, Wang, A.H.-J.
Deposit date:2009-01-13
Release date:2009-01-27
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure, Assembly, and Mechanism of a PLP-Dependent Dodecameric l-Aspartate beta-Decarboxylase
Structure, 17, 2009
1D22
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BU of 1d22 by Molmil
BINDING OF THE ANTITUMOR DRUG NOGALAMYCIN AND ITS DERIVATIVES TO DNA: STRUCTURAL COMPARISON
Descriptor: DNA (5'-D(*(5CM)P*GP*TP*(AS)P*(5CM)P*G)-3'), U-58872, HYDROXY DERIVATIVE OF NOGALAMYCIN
Authors:Gao, Y.-G, Liaw, Y.-C, Robinson, H, Wang, A.H.-J.
Deposit date:1990-08-08
Release date:1991-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Binding of the antitumor drug nogalamycin and its derivatives to DNA: structural comparison.
Biochemistry, 29, 1990
2ZY3
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BU of 2zy3 by Molmil
dodecameric L-aspartate beta-decarboxylase
Descriptor: L-aspartate beta-decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Chen, H.-J, Ko, T.-P, Lee, C.-Y, Wang, N.-C, Wang, A.H.-J.
Deposit date:2009-01-13
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure, Assembly, and Mechanism of a PLP-Dependent Dodecameric l-Aspartate beta-Decarboxylase
Structure, 17, 2009
2ZY4
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dodecameric L-aspartate beta-decarboxylase
Descriptor: CHLORIDE ION, L-aspartate beta-decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Chen, H.-J, Ko, T.-P, Lee, C.-Y, Wang, N.-C, Wang, A.H.-J.
Deposit date:2009-01-13
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure, Assembly, and Mechanism of a PLP-Dependent Dodecameric l-Aspartate beta-Decarboxylase
Structure, 17, 2009
8KB6
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Crystal Structure of Canine TNF-alpha
Descriptor: Tumor necrosis factor
Authors:Lee, C.C, Wang, A.H.-J.
Deposit date:2023-08-03
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.850166 Å)
Cite:Structure-based development of a canine TNF-alpha-specific antibody using adalimumab as a template.
Protein Sci., 33, 2024
1UAQ
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BU of 1uaq by Molmil
The crystal structure of yeast cytosine deaminase
Descriptor: DIHYDROPYRIMIDINE-2,4(1H,3H)-DIONE, ZINC ION, cytosine deaminase
Authors:Ko, T.-P, Lin, J.-J, Hu, C.-Y, Hsu, Y.-H, Wang, A.H.-J, Liaw, S.-H.
Deposit date:2003-03-14
Release date:2003-04-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of yeast cytosine deaminase. Insights into enzyme mechanism and evolution
J.Biol.Chem., 278, 2003
1WL2
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Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R90A mutant
Descriptor: SULFATE ION, octoprenyl-diphosphate synthase
Authors:Guo, R.T, Kuo, C.J, Cheng, Y.S, Cheng, Y.L, Liang, P.H, Wang, A.H.-J.
Deposit date:2004-06-18
Release date:2005-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Biochemical and Structural Basis for Octaprenyl Pyrophosphate Synthase
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