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PDB: 650 results

6GUB
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BU of 6gub by Molmil
CDK2/CyclinA in complex with Flavopiridol
Descriptor: 2-(2-chlorophenyl)-8-[(3~{R},4~{R})-1-methyl-3-oxidanyl-piperidin-4-yl]-5,7-bis(oxidanyl)chromen-4-one, Cyclin-A2, Cyclin-dependent kinase 2
Authors:Wood, D.J, Korolchuk, S, Tatum, N.J, Wang, L.Z, Endicott, J.A, Noble, M.E.M, Martin, M.P.
Deposit date:2018-06-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Differences in the Conformational Energy Landscape of CDK1 and CDK2 Suggest a Mechanism for Achieving Selective CDK Inhibition.
Cell Chem Biol, 26, 2019
6M63
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BU of 6m63 by Molmil
Crystal structure of a cAMP sensor G-Flamp1.
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Chimera of Cyclic nucleotide-gated potassium channel mll3241 and Yellow fluorescent protein
Authors:Zhou, Z, Chen, S, Wang, L, Chu, J.
Deposit date:2020-03-12
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A high-performance genetically encoded fluorescent indicator for in vivo cAMP imaging.
Nat Commun, 13, 2022
3TG4
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BU of 3tg4 by Molmil
Structure of SMYD2 in complex with SAM
Descriptor: GLYCEROL, N-lysine methyltransferase SMYD2, S-ADENOSYLMETHIONINE, ...
Authors:Zhao, K, Wang, L.
Deposit date:2011-08-17
Release date:2011-08-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of human SMYD2 reveals the basis of p53 tumor suppressor methylation
J.Biol.Chem., 2011
6GUK
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BU of 6guk by Molmil
CDK2 in complex with CGP74514A
Descriptor: Cyclin-dependent kinase 2, ~{N}2-[(1~{R},2~{S})-2-azanylcyclohexyl]-~{N}6-(3-chlorophenyl)-9-ethyl-purine-2,6-diamine
Authors:Wood, D.J, Korolchuk, S, Tatum, N.J, Wang, L.Z, Endicott, J.A, Noble, M.E.M, Martin, M.P.
Deposit date:2018-06-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Differences in the Conformational Energy Landscape of CDK1 and CDK2 Suggest a Mechanism for Achieving Selective CDK Inhibition.
Cell Chem Biol, 26, 2019
4M02
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BU of 4m02 by Molmil
Middle fragment(residues 494-663) of the binding region of SraP
Descriptor: CALCIUM ION, GLYCEROL, Serine-rich adhesin for platelets
Authors:Yang, Y.H, Jiang, Y.L, Zhang, J, Wang, L, Chen, Y, Zhou, C.Z.
Deposit date:2013-08-01
Release date:2014-06-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural Insights into SraP-Mediated Staphylococcus aureus Adhesion to Host Cells
Plos Pathog., 10, 2014
7DRI
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BU of 7dri by Molmil
Structure of SspE_CTD_41658
Descriptor: DUF1524 domain
Authors:Haiyan, G, Jinchuan, Z, Chen, S, Wang, L, Wu, G.
Deposit date:2020-12-28
Release date:2022-06-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Nicking mechanism underlying the DNA phosphorothioate-sensing antiphage defense by SspE.
Nat Commun, 13, 2022
4MDE
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BU of 4mde by Molmil
Structure of bacterial polynucleotide kinase product complex bound to GDP and DNA
Descriptor: DNA (5'-D(P*CP*CP*TP*GP*T)-3'), GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Shuman, S, Das, U, Wang, L.K, Smith, P, Jacewicz, A.
Deposit date:2013-08-22
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of bacterial polynucleotide kinase in a Michaelis complex with GTP*Mg2+ and 5'-OH oligonucleotide and a product complex with GDP*Mg2+ and 5'-PO4 oligonucleotide reveal a mechanism of general acid-base catalysis and the determinants of phosphoacceptor recognition.
Nucleic Acids Res., 42, 2014
4JI2
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BU of 4ji2 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JI4
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BU of 4ji4 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.692 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JI8
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BU of 4ji8 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.742 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4JI0
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BU of 4ji0 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, ZINC ION, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.492 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
4N0G
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BU of 4n0g by Molmil
Crystal Structure of PYL13-PP2CA complex
Descriptor: Abscisic acid receptor PYL13, MAGNESIUM ION, Protein phosphatase 2C 37, ...
Authors:Li, W, Wang, L, Sheng, X, Yan, C, Zhou, R, Hang, J, Yin, P, Yan, N.
Deposit date:2013-10-01
Release date:2013-11-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:Molecular basis for the selective and ABA-independent inhibition of PP2CA by PYL13
Cell Res., 23, 2013
2QWL
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BU of 2qwl by Molmil
Crystal structure of bovine hsc70 (1-394aa)in the ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Heat shock cognate 71 kDa protein, ...
Authors:Jiang, J, Maes, E.G, Wang, L, Taylor, A.B, Hinck, A.P, Lafer, E.M, Sousa, R.
Deposit date:2007-08-10
Release date:2007-12-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of J cochaperone binding and regulation of Hsp70.
Mol.Cell, 28, 2007
4JI1
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BU of 4ji1 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.144 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
5Y21
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BU of 5y21 by Molmil
Crystal structure of AL2 PAL domain in complex with AtRing1a proximal site
Descriptor: AtRing1a proximal binding site peptide, PHD finger protein ALFIN-LIKE 2
Authors:Peng, L, Wang, L.L, Huang, Y.
Deposit date:2017-07-22
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.769 Å)
Cite:Structural Analysis of the Arabidopsis AL2-PAL and PRC1 Complex Provides Mechanistic Insight into Active-to-Repressive Chromatin State Switch
J. Mol. Biol., 430, 2018
4JI5
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BU of 4ji5 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
2PVE
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BU of 2pve by Molmil
NMR and X-ray Analysis of Structural Additivity in Metal Binding Site-Swapped Hybrids of Rubredoxin
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Rubredoxin, ...
Authors:LeMaster, D.M, Anderson, J.S, Wang, L, Guo, Y, Li, H, Hernandez, G.
Deposit date:2007-05-09
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.79 Å)
Cite:NMR and X-ray analysis of structural additivity in metal binding site-swapped hybrids of rubredoxin.
Bmc Struct.Biol., 7, 2007
4JI7
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BU of 4ji7 by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ...
Authors:Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T.
Deposit date:2013-03-05
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The central role of protein S12 in organizing the structure of the decoding site of the ribosome.
Rna, 19, 2013
3TY5
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BU of 3ty5 by Molmil
Crystal Structure of C. thermocellum PNKP Ligase domain in complex with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Polynucleotide 2',3'-cyclic phosphate phosphodiesterase / polynucleotide 5'-hydroxyl-kinase / polynucleotide 3'-phosphatase, ...
Authors:Smith, P, Wang, L, Shuman, S.
Deposit date:2011-09-23
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family.
Proc.Natl.Acad.Sci.USA, 109, 2012
2QWO
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BU of 2qwo by Molmil
Crystal structure of disulfide-bond-crosslinked complex of bovine hsc70 (1-394aa)R171C and bovine Auxilin (810-910aa)D876C in the ADP*Pi form #1
Descriptor: ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Jiang, J, Maes, E.G, Wang, L, Taylor, A.B, Hinck, A.P, Lafer, E.M, Sousa, R.
Deposit date:2007-08-10
Release date:2007-12-18
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of J cochaperone binding and regulation of Hsp70.
Mol.Cell, 28, 2007
2QWP
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BU of 2qwp by Molmil
Crystal structure of disulfide-bond-crosslinked complex of bovine hsc70 (1-394aa)R171C and bovine Auxilin (810-910aa)D876C in the ADP*Pi form #2
Descriptor: ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Jiang, J, Maes, E.G, Wang, L, Taylor, A.B, Hinck, A.P, Lafer, E.M, Sousa, R.
Deposit date:2007-08-10
Release date:2007-12-18
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of J cochaperone binding and regulation of Hsp70.
Mol.Cell, 28, 2007
3TY8
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BU of 3ty8 by Molmil
Crystal Structure of C. Thermocellum PNKP Ligase Domain Apo Form
Descriptor: D(-)-TARTARIC ACID, GLYCEROL, Polynucleotide 2',3'-cyclic phosphate phosphodiesterase / polynucleotide 5'-hydroxyl-kinase / polynucleotide 3'-phosphatase
Authors:Smith, P, Wang, L, Shuman, S.
Deposit date:2011-09-23
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family.
Proc.Natl.Acad.Sci.USA, 109, 2012
2QWM
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BU of 2qwm by Molmil
Crystal structure of bovine hsc70 (1-394aa)in the ADP*Vi state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Heat shock cognate 71 kDa protein, ...
Authors:Jiang, J, Maes, E.G, Wang, L, Taylor, A.B, Hinck, A.P, Lafer, E.M, Sousa, R.
Deposit date:2007-08-10
Release date:2007-12-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural basis of J cochaperone binding and regulation of Hsp70.
Mol.Cell, 28, 2007
7FAU
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BU of 7fau by Molmil
Structure Determination of the NB1B11-RBD Complex
Descriptor: NB_1B11, Spike protein S1, ZINC ION
Authors:Shi, Z.Z, Li, X.X, Wang, L, Sun, Z.C, Zhang, H.W, Chen, X.C, Cui, Q.Q, Qiao, H.R, Lan, Z.Y, Zhang, X.
Deposit date:2021-07-07
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural basis of nanobodies neutralizing SARS-CoV-2 variants.
Structure, 30, 2022
5WVY
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BU of 5wvy by Molmil
The crystal structure of Cren7 mutant L28V in complex with dsDNA
Descriptor: Chromatin protein Cren7, DNA (5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3')
Authors:Zhang, Z.F, Zhao, M.H, Wang, L, Chen, Y.Y, Dong, Y.H, Gong, Y, Huang, L.
Deposit date:2016-12-29
Release date:2017-04-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Roles of Leu28 side chain intercalation in the interaction between Cren7 and DNA
Biochem. J., 474, 2017

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