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PDB: 132 results

8RTD
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BU of 8rtd by Molmil
Stalk-Arches-IMC structure from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwG protein, TrwI protein, ...
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (4.33 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
8RT7
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BU of 8rt7 by Molmil
Conformation-B of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwF protein, TrwH
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
8RT4
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BU of 8rt4 by Molmil
O-layer structure (TrwH/VirB7, TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwF protein, TrwH protein
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
8RT8
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BU of 8rt8 by Molmil
Conformation-C of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwF protein, TrwH protein
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
5NNY
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BU of 5nny by Molmil
Crystal structure of the phosphatase domain from the Legionella effector WipB
Descriptor: WipB
Authors:Pinotsis, N, Waksman, G, Prevost, M.S.
Deposit date:2017-04-10
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Legionella effector WipB is a translocated Ser/Thr phosphatase that targets the host lysosomal nutrient sensing machinery.
Sci Rep, 7, 2017
8RT5
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BU of 8rt5 by Molmil
I-layer structure (TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwF protein
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
2XG5
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BU of 2xg5 by Molmil
E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 5d
Descriptor: (2R)-2-[5-CYCLOPROPYL-6-(HYDROXYSULFANYL)-4-(NAPHTHALEN-1-YLMETHYL)-2-OXOPYRIDIN-1(2H)-YL]-3-PHENYLPROPANOIC ACID, (2R,3R)-8-CYCLOPROPYL-7-(NAPHTHALEN-1-YLMETHYL)-5-OXO-2-PHENYL-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, ...
Authors:Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G.
Deposit date:2010-05-30
Release date:2010-07-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity.
J.Med.Chem., 53, 2010
2XG4
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BU of 2xg4 by Molmil
E. coli P pilus chaperone-subunit complex PapD-PapH bound to pilus biogenesis inhibitor, pilicide 2c
Descriptor: (3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID, CHAPERONE PROTEIN PAPD, COBALT (II) ION, ...
Authors:Remaut, H, Phan, G, Buelens, F, Chorell, E, Pinkner, J.S, Edvinsson, S, Almqvist, F, Hultgren, S.J, Waksman, G.
Deposit date:2010-05-30
Release date:2010-07-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design and Synthesis of C-2 Substituted Thiazolo and Dihydrothiazolo Ring-Fused 2-Pyridones: Pilicides with Increased Antivirulence Activity.
J.Med.Chem., 53, 2010
2OFQ
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BU of 2ofq by Molmil
NMR Solution Structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Descriptor: TraN, TraO
Authors:Harris, R, Bayliss, R, Driscoll, P.C, Waksman, G.
Deposit date:2007-01-04
Release date:2007-01-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Proc.Natl.Acad.Sci.Usa, 104, 2007
8RTA
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BU of 8rta by Molmil
Arches-protomer complex full-length structure (TrwJ/VirB8) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Descriptor: TrwE protein, TrwG protein
Authors:Mace, K, Waksman, G.
Deposit date:2024-01-25
Release date:2024-06-19
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (6.22 Å)
Cite:Cryo-EM structure of a conjugative type IV secretion system suggests a molecular switch regulating pilus biogenesis.
Embo J., 43, 2024
2W07
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BU of 2w07 by Molmil
Structural determinants of polymerization reactivity of the P pilus adaptor subunit PapF
Descriptor: CHAPERONE PROTEIN PAPD, MINOR PILIN SUBUNIT PAPF, SULFATE ION
Authors:Verger, D, Rose, R.J, Paci, E, Costakes, G, Daviter, T, Hultgren, S, Remaut, H, Ashcroft, A.E, Radford, S.E, Waksman, G.
Deposit date:2008-08-12
Release date:2008-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Determinants of Polymerization Reactivity of the P Pilus Adaptor Subunit Papf.
Structure, 16, 2008
2VQI
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BU of 2vqi by Molmil
Structure of the P pilus usher (PapC) translocation pore
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LAURYL DIMETHYLAMINE-N-OXIDE, OUTER MEMBRANE USHER PROTEIN PAPC
Authors:Remaut, H, Tang, C, Henderson, N.S, Pinkner, J.S, Wang, T, Hultgren, S.J, Thanassi, D.G, Li, H, Waksman, G.
Deposit date:2008-03-16
Release date:2008-05-27
Last modified:2019-01-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Fiber formation across the bacterial outer membrane by the chaperone/usher pathway.
Cell, 133, 2008
2UY7
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BU of 2uy7 by Molmil
Crystal structure of the P pilus rod subunit PapA
Descriptor: PAP FIMBRIAL MAJOR PILIN PROTEIN, PERIPLASMID CHAPERONE PAPD PROTEIN, SULFATE ION
Authors:Verger, D, Bullitt, E, Hultgren, S.J, Waksman, G.
Deposit date:2007-04-02
Release date:2007-05-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the P Pilus Rod Subunit Papa.
Plos Pathog., 3, 2007
6GYB
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BU of 6gyb by Molmil
Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri
Descriptor: VirB10 protein, VirB7, VirB9 protein
Authors:Sgro, G.G, Costa, T.R.D, Farah, C.S, Waksman, G.
Deposit date:2018-06-28
Release date:2018-10-24
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri.
Nat Microbiol, 3, 2018
1A81
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BU of 1a81 by Molmil
CRYSTAL STRUCTURE OF THE TANDEM SH2 DOMAIN OF THE SYK KINASE BOUND TO A DUALLY TYROSINE-PHOSPHORYLATED ITAM
Descriptor: SYK KINASE, T-CELL SURFACE GLYCOPROTEIN CD3 EPSILON CHAIN
Authors:Fuetterer, K, Waksman, G.
Deposit date:1998-03-31
Release date:1998-10-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for Syk tyrosine kinase ubiquity in signal transduction pathways revealed by the crystal structure of its regulatory SH2 domains bound to a dually phosphorylated ITAM peptide.
J.Mol.Biol., 281, 1998
1IS0
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BU of 1is0 by Molmil
Crystal Structure of a Complex of the Src SH2 Domain with Conformationally Constrained Peptide Inhibitor
Descriptor: AY0 GLU GLU ILE peptide, Tyrosine-protein kinase transforming protein SRC
Authors:Davidson, J.P, Lubman, O, Rose, T, Waksman, G, Martin, S.F.
Deposit date:2001-11-02
Release date:2002-02-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Calorimetric and structural studies of 1,2,3-trisubstituted cyclopropanes as conformationally constrained peptide inhibitors of Src SH2 domain binding.
J.Am.Chem.Soc., 124, 2002
6GEB
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BU of 6geb by Molmil
X-ray structure of the Legionella pneumophila ATPase DotB
Descriptor: DotB, PHOSPHATE ION
Authors:Prevost, M.S, Waksman, G.
Deposit date:2018-04-26
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:X-ray crystal structures of the type IVb secretion system DotB ATPases.
Protein Sci., 27, 2018
5O96
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BU of 5o96 by Molmil
Structure of the putative methyltransferase Lpg2936 from Legionella pneumophila in complex with the bound cofactor SAM
Descriptor: Ribosomal RNA small subunit methyltransferase E, S-ADENOSYLMETHIONINE
Authors:Pinotsis, N, Waksman, G.
Deposit date:2017-06-15
Release date:2017-11-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the Legionella pneumophila Lpg2936 in complex with the cofactor S-adenosyl-L-methionine reveals novel insights into the mechanism of RsmE family methyltransferases.
Protein Sci., 26, 2017
2GR7
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BU of 2gr7 by Molmil
Hia 992-1098
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Adhesin
Authors:Meng, G, Waksman, G.
Deposit date:2006-04-23
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the outer membrane translocator domain of the Haemophilus influenzae Hia trimeric autotransporter.
Embo J., 25, 2006
1EYG
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BU of 1eyg by Molmil
Crystal structure of chymotryptic fragment of E. coli ssb bound to two 35-mer single strand DNAS
Descriptor: SINGLE STRANDED 28-MER OF D(C), SINGLE-STRAND DNA-BINDING PROTEIN
Authors:Raghunathan, S, Waksman, G.
Deposit date:2000-05-06
Release date:2000-08-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the DNA binding domain of E. coli SSB bound to ssDNA.
Nat.Struct.Biol., 7, 2000
2GR8
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BU of 2gr8 by Molmil
Hia 1022-1098
Descriptor: Adhesin
Authors:Meng, G, Waksman, G.
Deposit date:2006-04-23
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the outer membrane translocator domain of the Haemophilus influenzae Hia trimeric autotransporter.
Embo J., 25, 2006
6EXE
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BU of 6exe by Molmil
Crystal structure of DotM cytoplasmic domain (residues 153-380),R217E
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, IcmP (DotM)
Authors:Meir, A, Waksman, G.
Deposit date:2017-11-08
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Legionella DotM structure reveals a role in effector recruiting to the Type 4B secretion system.
Nat Commun, 9, 2018
6EXA
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BU of 6exa by Molmil
Crystal structure of DotM cytoplasmic domain (residues 153-380), double mutant R196E/R197E
Descriptor: GLYCEROL, IcmP (DotM), SULFATE ION
Authors:Meir, A, Waksman, G.
Deposit date:2017-11-07
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Legionella DotM structure reveals a role in effector recruiting to the Type 4B secretion system.
Nat Commun, 9, 2018
5N8O
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BU of 5n8o by Molmil
Cryo EM structure of the conjugative relaxase TraI of the F/R1 plasmid system
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA helicase I
Authors:Ilangovan, A, Zanetti, G, Waksman, G.
Deposit date:2017-02-23
Release date:2017-05-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM Structure of a Relaxase Reveals the Molecular Basis of DNA Unwinding during Bacterial Conjugation
Cell, 169, 2017
2THF
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BU of 2thf by Molmil
STRUCTURE OF HUMAN ALPHA-THROMBIN Y225F MUTANT BOUND TO D-PHE-PRO-ARG-CHLOROMETHYLKETONE
Descriptor: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, SODIUM ION, THROMBIN HEAVY CHAIN, ...
Authors:Caccia, S, Futterer, K, Di Cera, E, Waksman, G.
Deposit date:1999-01-26
Release date:1999-03-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unexpected crucial role of residue 225 in serine proteases.
Proc.Natl.Acad.Sci.USA, 96, 1999

226707

数据于2024-10-30公开中

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