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PDB: 12920 件

5HNF
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Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
分子名称: DNA (5'-D(*GP*(YPE)P*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*(YPF)P*C)-3'), Restriction endonuclease R.BpuJI
著者Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
登録日2016-01-18
公開日2016-08-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.546 Å)
主引用文献Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016
5HTN
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BU of 5htn by Molmil
putative sugar kinases from Synechococcus elongatus PCC7942-apo form
分子名称: Probable sugar kinase
著者Xie, Y, Li, M, Chang, W.
登録日2016-01-27
公開日2016-06-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
3TFZ
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Crystal structure of Zhui aromatase/cyclase from Streptomcyes sp. R1128
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Cyclase, POTASSIUM ION
著者Ames, B.D, Lee, M.Y, Moody, C, Zhang, W, Tang, Y, Wong, S.K, Tsai, S.C.
登録日2011-08-16
公開日2011-09-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural and Biochemical Characterization of ZhuI Aromatase/Cyclase from the R1128 Polyketide Pathway.
Biochemistry, 50, 2011
3SPW
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BU of 3spw by Molmil
Structure of Osh4p/Kes1p in complex with phosphatidylinositol 4-phosphate
分子名称: (2R)-1-(heptadecanoyloxy)-3-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, Protein KES1
著者Delfosse, V, de Saint-Jean, M, Douguet, D, Antonny, B, Drin, G, Bourguet, W.
登録日2011-07-04
公開日2011-11-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Osh4p exchanges sterols for phosphatidylinositol 4-phosphate between lipid bilayers.
J.Cell Biol., 195, 2011
3SOV
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BU of 3sov by Molmil
The structure of a beta propeller domain in complex with peptide S
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Low-density lipoprotein receptor-related protein 6, ...
著者Wang, W, Bourhis, E, Zhang, Y, Rouge, L, Wu, Y, Franke, Y, Cochran, A.G.
登録日2011-06-30
公開日2011-09-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Wnt antagonists bind through a short peptide to the first beta-propeller domain of LRP5/6.
Structure, 19, 2011
4NPM
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BU of 4npm by Molmil
Crystal structure of Zebrafish ALKBH5 in complex with succinic acid
分子名称: MANGANESE (II) ION, RNA demethylase ALKBH5, SUCCINIC ACID
著者He, C, Chen, W, Zhang, L.
登録日2013-11-21
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Crystal structure of the RNA demethylase ALKBH5 from zebrafish.
Febs Lett., 588, 2014
5HOZ
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Crystal structure of Equine Serum Albumin (ESA) at pH 9.0
分子名称: Serum albumin
著者Handing, K.B, Shabalin, I.G, Minor, W, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2016-01-19
公開日2016-02-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of Equine Serum Albumin (ESA) at pH 9.0
To Be Published
4NS5
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BU of 4ns5 by Molmil
Crystal structure of human BS69 Bromo-Zinc finger-PWWP
分子名称: ZINC ION, Zinc finger MYND domain-containing protein 11
著者Wang, J.C, Qin, S, Li, F.D, Li, S, Zhang, W, Wu, J.H, Shi, Y.Y.
登録日2013-11-28
公開日2014-04-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human BS69 Bromo-ZnF-PWWP reveals its role in H3K36me3 nucleosome binding.
Cell Res., 24, 2014
3SSP
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BU of 3ssp by Molmil
Engineered low-affinity halide-binding protein derived from YFP: halide-free
分子名称: Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-08
公開日2012-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.628 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
4ND9
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BU of 4nd9 by Molmil
The putative substrate binding domain of ABC-type transporter from Agrobacterium tumefaciens in open conformation
分子名称: ABC transporter, substrate binding protein (Proline/glycine/betaine)
著者Nicholls, R, Tkaczuk, K.L, Kagan, O, Chruszcz, M, Domagalski, M.J, Savchenko, A, Joachimiak, A, Murshudov, G, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2013-10-25
公開日2013-12-11
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The putative substrate binding domain of ABC-type transporter from Agrobacterium tumefaciens in open conformation
To be Published
3SSV
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BU of 3ssv by Molmil
Engineered low-affinity halide-binding protein derived from YFP: fluoride complex
分子名称: FLUORIDE ION, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-08
公開日2012-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.861 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
5HWP
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BU of 5hwp by Molmil
MvaS with acetylated Cys115 in complex with coenzyme A
分子名称: COENZYME A, GLYCEROL, Hydroxymethylglutaryl-CoA synthase, ...
著者Bock, T, Kasten, J, Blankenfeldt, W.
登録日2016-01-29
公開日2016-05-11
最終更新日2016-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the HMG-CoA Synthase MvaS from the Gram-Negative Bacterium Myxococcus xanthus.
Chembiochem, 17, 2016
5HWZ
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BU of 5hwz by Molmil
Crystal structure of nitrophorin 4 D30N mutant with nitrite
分子名称: NITRITE ION, Nitrophorin-4, PROTOPORPHYRIN IX CONTAINING FE
著者Ogata, H, He, C, Lubitz, W.
登録日2016-01-29
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Elucidation of the heme active site electronic structure affecting the unprecedented nitrite dismutase activity of the ferrihemebproteins, the nitrophorins.
Chem Sci, 7, 2016
3SVD
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BU of 3svd by Molmil
Engineered medium-affinity halide-binding protein derived from YFP: bromide complex
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-12
公開日2012-07-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
4NWQ
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BU of 4nwq by Molmil
Computationally Designed Two-Component Self-Assembling Tetrahedral Cage, T33-21, Crystallized in Space Group F4132
分子名称: Putative uncharacterized protein PH0671, SULFATE ION, Uncharacterized protein
著者McNamara, D.E, King, N.P, Bale, J.B, Sheffler, W, Baker, D, Yeates, T.O.
登録日2013-12-06
公開日2014-05-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Accurate design of co-assembling multi-component protein nanomaterials.
Nature, 510, 2014
5HP7
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BU of 5hp7 by Molmil
Crystal structures of RidA in the apo form
分子名称: Reactive Intermediate Deaminase A, chloroplastic
著者Xie, W, Liu, X.
登録日2016-01-20
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of RidA, an important enzyme for the prevention of toxic side products
Sci Rep, 6, 2016
5HPA
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BU of 5hpa by Molmil
The crystal of rhodanese domain of YgaP treated with sodium thiosulfate
分子名称: Inner membrane protein YgaP
著者Eichmann, C, Tzitzilonis, C, Kwiatkowski, W, Riek, R.
登録日2016-01-20
公開日2017-02-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献S-Sulfhydration of the Catalytic Cysteine in the Rhodanese Domain of YgaP is a Complex Dynamical Process.
To Be Published
4NEK
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BU of 4nek by Molmil
Putative enoyl-CoA hydratase/carnithine racemase from Magnetospirillum magneticum AMB-1
分子名称: DI(HYDROXYETHYL)ETHER, Enoyl-CoA hydratase/carnithine racemase
著者Tkaczuk, K.L, Cooper, D.R, Geffken, K, Chapman, H.C, Stead, M, Hillerich, B, Ahmed, M, Bonanno, J.B, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-10-29
公開日2013-11-27
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Putative enoyl-CoA hydratase/carnithine racemase from Magnetospirillum magneticum AMB-1
To be Published
5HWO
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BU of 5hwo by Molmil
MvaS in complex with 3-hydroxy-3-methylglutaryl coenzyme A
分子名称: 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A, GLYCEROL, Hydroxymethylglutaryl-CoA synthase, ...
著者Bock, T, Kasten, J, Blankenfeldt, W.
登録日2016-01-29
公開日2016-05-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal Structure of the HMG-CoA Synthase MvaS from the Gram-Negative Bacterium Myxococcus xanthus.
Chembiochem, 17, 2016
4NHD
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BU of 4nhd by Molmil
Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Vibrio Cholerae in complex with Coenzyme A
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1, CALCIUM ION, COENZYME A, ...
著者Hou, J, Zheng, H, Langner, K, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-11-04
公開日2013-12-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Vibrio Cholerae in complex with Coenzyme A
To be Published
3T7B
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BU of 3t7b by Molmil
Crystal Structure of N-acetyl-L-glutamate kinase from Yersinia pestis
分子名称: Acetylglutamate kinase, GLUTAMIC ACID, S,R MESO-TARTARIC ACID
著者Demas, M.W, Solberg, R.G, Cooper, D.R, Chruszcz, M, Porebski, P.J, Zheng, H, Onopriyenko, O, Skarina, T, Savchenko, A, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-07-29
公開日2011-09-14
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of N-acetyl-L-glutamate kinase from Yersinia pestis
To be Published
4NPA
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BU of 4npa by Molmil
Scrystal structure of protein with unknown function from Vibrio cholerae at P22121 spacegroup
分子名称: DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, Putative uncharacterized protein, ...
著者Boyko, K.M, Gorbacheva, M.A, Rakitina, T.V, Korgenevsky, D.A, Dorovatovsky, P.V, Lipkin, A.V, Minor, W, Shumilin, I.A, Popov, V.O.
登録日2013-11-21
公開日2013-12-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of protein with unknown function from Vibrio cholerae at P22121 spacegroup
To be Published
3TAP
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BU of 3tap by Molmil
Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to Duplex DNA with Cytosine-Adenine Mismatch at (n-3) Position
分子名称: 5'-D(*G*CP*GP*AP*TP*CP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', DNA polymerase I, ...
著者Wang, W, Beese, L.S.
登録日2011-08-04
公開日2011-10-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.655 Å)
主引用文献Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis.
Proc.Natl.Acad.Sci.USA, 108, 2011
7NEV
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BU of 7nev by Molmil
Structure of the hemiacetal complex between the SARS-CoV-2 Main Protease and Leupeptin
分子名称: 3C-like proteinase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Guenther, S, Reinke, P.Y.A, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H.M, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashhour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Xavier, P.L, Ullah, N, Andaleeb, H, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Zaitsev-Doyle, J.J, Rogers, C, Gieseler, H, Melo, D, Monteiro, D.C.F, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schluenzen, F, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Sun, X, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
登録日2021-02-05
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
4NW2
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BU of 4nw2 by Molmil
Tandem chromodomains of human CHD1 in complex with Influenza virus NS1 C-terminal tail trimethylated at K229
分子名称: Chromodomain-helicase-DNA-binding protein 1, GLYCEROL, Nonstructural protein 1, ...
著者Qin, S, Tempel, W, Xu, C, El Bakkouri, M, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2013-12-05
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for histone mimicry and hijacking of host proteins by influenza virus protein NS1.
Nat Commun, 5, 2014

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