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PDB: 12895 件

5HZ0
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Plant peptide hormone receptor RGFR1 in complex with RGF2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASP-PTR-TRP-LYS-PRO-ARG-HIS-HIS-PRO-HYP-ARG-ASN-ASN, ...
著者Song, W, Han, Z, Chai, J.
登録日2016-02-02
公開日2017-04-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Plant Receptor
To Be Published
5HZQ
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Crystal structure of cellular retinoic acid binding protein 2 (CRABP2)-aryl fluorosulfate covalent conjugate
分子名称: 4'-[(3,6,9,12-tetraoxapentadec-14-yn-1-yl)oxy][1,1'-biphenyl]-4-yl sulfurofluoridate, Cellular retinoic acid-binding protein 2, GLYCEROL
著者Chen, W, Mortenson, D.E, Wilson, I.A, Kelly, J.W.
登録日2016-02-02
公開日2016-06-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Arylfluorosulfates Inactivate Intracellular Lipid Binding Protein(s) through Chemoselective SuFEx Reaction with a Binding Site Tyr Residue.
J.Am.Chem.Soc., 138, 2016
2QQ8
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BU of 2qq8 by Molmil
Crystal structure of the putative RabGAP domain of human TBC1 domain family member 14
分子名称: TBC1 domain family member 14, UNKNOWN ATOM OR ION
著者Tong, Y, Tempel, W, Dimov, S, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2007-07-26
公開日2007-08-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the putative RabGAP domain of human TBC1 domain family member 14.
To be Published
8TF7
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Apo structure of protein crystal of Tri17
分子名称: AMP-binding protein
著者Zhai, R, Zhang, W.
登録日2023-07-09
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献De novo biosynthesis of azide by a promiscuous N-nitrosylase
To Be Published
5HLT
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BU of 5hlt by Molmil
Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
分子名称: DNA (5'-D(*GP*YPY*TP*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*AP*YPY*C)-3'), Restriction endonuclease R.BpuJI
著者Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
登録日2016-01-15
公開日2016-08-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.672 Å)
主引用文献Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016
5HI0
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BU of 5hi0 by Molmil
The Substrate Binding Mode and Chemical Basis of a Reaction Specificity Switch in Oxalate Decarboxylase
分子名称: COBALT (II) ION, OXALATE ION, Oxalate decarboxylase OxdC, ...
著者Zhu, W, Easthon, L.M, Reinhardt, L.A, Tu, C, Cohen, S.E, Silverman, D.N, Allen, K.N, Richards, N.G.J.
登録日2016-01-11
公開日2016-04-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.602 Å)
主引用文献Substrate Binding Mode and Molecular Basis of a Specificity Switch in Oxalate Decarboxylase.
Biochemistry, 55, 2016
2QT5
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BU of 2qt5 by Molmil
Crystal Structure of GRIP1 PDZ12 in Complex with the Fras1 Peptide
分子名称: (ASN)(ASN)(LEU)(GLN)(ASP)(GLY)(THR)(GLU)(VAL), 1,2-ETHANEDIOL, ACETIC ACID, ...
著者Long, J, Wei, Z, Feng, W, Zhao, Y, Zhang, M.
登録日2007-08-01
公開日2008-06-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Supramodular nature of GRIP1 revealed by the structure of its PDZ12 tandem in complex with the carboxyl tail of Fras1.
J.Mol.Biol., 375, 2008
5HIQ
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BU of 5hiq by Molmil
Crystal Structure of PQS Response Protein PqsE in Complex with 2-(1H-pyrrol-1-yl)benzoic acid
分子名称: 2-pyrrol-1-ylbenzoic acid, FE (III) ION, PqsE
著者Witzgall, F, Blankenfeldt, W.
登録日2016-01-12
公開日2016-04-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Dissecting the Multiple Roles of PqsE in Pseudomonas aeruginosa Virulence by Discovery of Small Tool Compounds.
Acs Chem.Biol., 11, 2016
7RNC
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BU of 7rnc by Molmil
Crystal structure of caspase-3 with inhibitor Ac-VDVVD-CHO
分子名称: Ac-VDVVD-CHO, Caspase-3 subunit p12, Caspase-3 subunit p17
著者McCue, W, Finzel, B.C.
登録日2021-07-29
公開日2022-06-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural Studies to Enable Drug Discovery
Thesis, 2021
5H9K
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Crystal of a leukotriene-binding salivary lipocalin
分子名称: Lipocalin AI-4
著者Andersen, J.F, Jablonka, W.
登録日2015-12-28
公開日2016-05-11
最終更新日2016-07-27
実験手法X-RAY DIFFRACTION (1.352 Å)
主引用文献Structure and Ligand-Binding Mechanism of a Cysteinyl Leukotriene-Binding Protein from a Blood-Feeding Disease Vector.
Acs Chem.Biol., 11, 2016
2R2D
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BU of 2r2d by Molmil
Structure of a quorum-quenching lactonase (AiiB) from Agrobacterium tumefaciens
分子名称: GLYCEROL, PHOSPHATE ION, ZINC ION, ...
著者Liu, D, Thomas, P.W, Momb, J, Hoang, Q, Petsko, G.A, Ringe, D, Fast, W.
登録日2007-08-24
公開日2007-10-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and specificity of a quorum-quenching lactonase (AiiB) from Agrobacterium tumefaciens.
Biochemistry, 46, 2007
7YK5
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BU of 7yk5 by Molmil
Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592)
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Multifunctional fusion protein, PYCO1 LSU binding motif, ...
著者Oh, Z.G, Ang, W.S.L, Bhushan, S, Mueller-Cajar, O.
登録日2022-07-21
公開日2023-06-21
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献A linker protein from a red-type pyrenoid phase separates with Rubisco via oligomerizing sticker motifs.
Proc.Natl.Acad.Sci.USA, 120, 2023
5HBX
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BU of 5hbx by Molmil
RNA primer-template complex with 2-methylimidazole-activated monomer analogue-2 binding sites
分子名称: RNA (5'-R(*(LCC)P*(LCC)P*(LCA)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*U)-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid
著者Zhang, W, Tam, C.P, Szostak, J.W.
登録日2016-01-03
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Unusual Base-Pairing Interactions in Monomer-Template Complexes.
ACS Cent Sci, 2, 2016
7R08
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BU of 7r08 by Molmil
Abortive infection DNA polymerase Abi-P2
分子名称: Reverse transcriptase
著者Gapinska, M.A, Figiel, M, Czarnocki Cieciura, M, Nowotny, M, Zajko, W.
登録日2022-02-01
公開日2022-09-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
Nucleic Acids Res., 50, 2022
7R06
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BU of 7r06 by Molmil
Abortive infection DNA polymerase AbiK from Lactococcus lactis
分子名称: AbiK, DNA (5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3')
著者Figiel, M, Nowotny, M, Gapinska, M, Czarnocki-Cieciura, M, Zajko, W.
登録日2022-02-01
公開日2022-09-07
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (2.27 Å)
主引用文献Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
Nucleic Acids Res., 50, 2022
4W87
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BU of 4w87 by Molmil
Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with a xyloglucan oligosaccharide
分子名称: MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
1HQL
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The xenograft antigen in complex with the B4 isolectin of Griffonia simplicifolia lectin-1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, LECTIN, ...
著者Tempel, W, Lipscomb, L.A, Rose, J.P, Woods, R.J.
登録日2000-12-18
公開日2002-01-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The xenograft antigen bound to Griffonia simplicifolia lectin 1-B(4). X-ray crystal structure of the complex and molecular dynamics characterization of the binding site.
J.Biol.Chem., 277, 2002
2REO
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BU of 2reo by Molmil
Crystal structure of human sulfotransferase 1C3 (Sult1C3) in complex with PAP
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Putative sulfotransferase 1C3
著者Tempel, W, Pan, P, Dong, A, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2007-09-26
公開日2007-10-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.651 Å)
主引用文献Crystal structure of human sulfotransferase 1C3 (Sult1C3) in complex with PAP.
To be Published
5HUX
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Putative sugar kinases from Synechococcus elongatus PCC7942 in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Probable sugar kinase
著者Xie, Y, Li, M, Chang, W.
登録日2016-01-27
公開日2016-06-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
2R53
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Crystal structure analysis of Bone Morphogenetic Protein-6 variant B2 (B2-BMP-6)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Bone morphogenetic protein 6
著者Mueller, T.D, Sebald, W.
登録日2007-09-03
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Type I receptor binding of bone morphogenetic protein 6 is dependent on N-glycosylation of the ligand.
Febs J., 275, 2007
7R07
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BU of 7r07 by Molmil
Abortive infection DNA polymerase AbiK from Lactococcus lactis
分子名称: AbiK, DNA (5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*C)-3'), MAGNESIUM ION
著者Figiel, M, Gapinska, M, Czarnocki-Cieciura, M, Zajko, W, Nowotny, M.
登録日2022-02-01
公開日2022-09-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
Nucleic Acids Res., 50, 2022
2R9H
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Crystal Structure of Q207C Mutant of CLC-ec1 in complex with Fab
分子名称: CHLORIDE ION, Fab fragment, H(+)/Cl(-) exchange transporter clcA
著者Nguitragool, W, Miller, C.
登録日2007-09-12
公開日2007-11-20
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of Q207C Mutant of CLC-ec1 in complex with Fab
To be Published
8X0J
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old yellow enzymes-Q102A/Y169F/R215A/R308A
分子名称: NADPH dehydrogenase, PHOSPHATE ION
著者Lei, W, Wei, S.
登録日2023-11-04
公開日2024-07-10
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Unlocking the function promiscuity of old yellow enzyme to catalyze asymmetric Morita-Baylis-Hillman reaction
To Be Published
1HV6
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BU of 1hv6 by Molmil
CRYSTAL STRUCTURE OF ALGINATE LYASE A1-III COMPLEXED WITH TRISACCHARIDE PRODUCT.
分子名称: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid-(1-4)-alpha-D-glucopyranuronic acid, ALGINATE LYASE, SULFATE ION
著者Yoon, H.-J, Hashimoto, W, Miyake, O, Murata, K, Mikami, B.
登録日2001-01-08
公開日2001-05-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of alginate lyase A1-III complexed with trisaccharide product at 2.0 A resolution.
J.Mol.Biol., 307, 2001
1DAH
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BU of 1dah by Molmil
DETHIOBIOTIN SYNTHETASE COMPLEXED WITH 7,8-DIAMINO-NONANOIC ACID, 5'-ADENOSYL-METHYLENE-TRIPHOSPHATE, AND MANGANESE
分子名称: 7,8-DIAMINO-NONANOIC ACID, DETHIOBIOTIN SYNTHETASE, MANGANESE (II) ION, ...
著者Huang, W, Jia, J, Schneider, G, Lindqvist, Y.
登録日1995-05-08
公開日1996-06-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Mechanism of an ATP-dependent carboxylase, dethiobiotin synthetase, based on crystallographic studies of complexes with substrates and a reaction intermediate.
Biochemistry, 34, 1995

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