Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12487 件

3SHT
DownloadVisualize
BU of 3sht by Molmil
Crystal structure of human MCPH1 tandem BRCT domains
分子名称: Microcephalin
著者Shao, Z.H, Li, F.D, Yan, W.
登録日2011-06-17
公開日2011-12-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Specific recognition of phosphorylated tail of H2AX by the tandem BRCT domains of MCPH1 revealed by complex structure
J.Struct.Biol., 177, 2012
4JR5
DownloadVisualize
BU of 4jr5 by Molmil
Structure-based Identification of Ureas as Novel Nicotinamide Phosphoribosyltransferase (Nampt) Inhibitors
分子名称: 1,2-ETHANEDIOL, 1-[4-(piperidin-1-ylsulfonyl)phenyl]-3-(pyridin-3-ylmethyl)thiourea, Nicotinamide phosphoribosyltransferase, ...
著者Zheng, X, Bauer, P, Baumeister, T, Buckmelter, A.J, Caligiuri, M, Clodfelter, K.H, Han, B, Ho, Y, Kley, N, Lin, J, Reynolds, D.J, Sharma, G, Smith, C.C, Wang, Z, Dragovich, P.S, Oh, A, Wang, W, Zak, M, Gunzner-Toste, J, Zhao, G, Yuen, P, Bair, K.W.
登録日2013-03-21
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.906 Å)
主引用文献Structure-based identification of ureas as novel nicotinamide phosphoribosyltransferase (nampt) inhibitors.
J.Med.Chem., 56, 2013
4JU0
DownloadVisualize
BU of 4ju0 by Molmil
Crystal structure of 2009 pandemic influenza virus hemagglutinin mutant D225E complexed with human receptor analogue LSTc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
登録日2013-03-24
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.908 Å)
主引用文献Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
3SST
DownloadVisualize
BU of 3sst by Molmil
Engineered low-affinity halide-binding protein derived from YFP: chloride complex
分子名称: CHLORIDE ION, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-08
公開日2012-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.403 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
3SVE
DownloadVisualize
BU of 3sve by Molmil
Engineered low-affinity halide-binding protein derived from YFP: bromide complex
分子名称: BROMIDE ION, Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-12
公開日2012-07-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.492 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
3SRY
DownloadVisualize
BU of 3sry by Molmil
Engineered high-affinity halide-binding protein derived from YFP: halide-free
分子名称: Green fluorescent protein
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-07
公開日2012-07-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.159 Å)
主引用文献Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
4J8B
DownloadVisualize
BU of 4j8b by Molmil
Crystal structure of alpha-COP/Emp47p complex
分子名称: Emp47p, coatomer alpha subunit
著者Ma, W, Goldberg, J.
登録日2013-02-14
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.878 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
4J9M
DownloadVisualize
BU of 4j9m by Molmil
Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after an A at the primer 3' end (AA/G)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA, DNA polymerase eta, ...
著者Zhao, Y, Gregory, M, Biertumpfel, C, Hua, Y, Hanaoka, F, Yang, W.
登録日2013-02-16
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
4J9N
DownloadVisualize
BU of 4j9n by Molmil
Human DNA polymerase eta-DNA ternary complex: misincorporation G opposite T after a G at the primer 3' end (GA/G)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA, DNA polymerase eta, ...
著者Zhao, Y, Gregory, M, Biertumpfel, C, Hua, Y, Hanaoka, F, Yang, W.
登録日2013-02-16
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.956 Å)
主引用文献Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013
3RPH
DownloadVisualize
BU of 3rph by Molmil
Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis co-crystallized with ATP/Mg2+.
分子名称: ADENOSINE MONOPHOSPHATE, ADP/ATP-dependent NAD(P)H-hydrate dehydratase, MAGNESIUM ION, ...
著者Shumilin, I.A, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2011-04-26
公開日2011-07-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3ROE
DownloadVisualize
BU of 3roe by Molmil
Crystal Structure of Mouse Apolipoprotein A-I Binding Protein in Complex with Thymidine
分子名称: Apolipoprotein A-I-binding protein, THYMIDINE
著者Shumilin, I.A, Jha, K.N, Cymborowski, M, Herr, J.C, Minor, W.
登録日2011-04-25
公開日2012-07-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3RQX
DownloadVisualize
BU of 3rqx by Molmil
Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis in complex with P1,P4-Di(adenosine-5') tetraphosphate
分子名称: ADP/ATP-DEPENDENT NAD(P)H-HYDRATE DEHYDRATASE, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, CHLORIDE ION, ...
著者Shumilin, I.A, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2011-04-28
公開日2011-07-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3RRB
DownloadVisualize
BU of 3rrb by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Bifunctional NAD(P)H-hydrate repair enzyme Nnr, POTASSIUM ION, ...
著者Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
登録日2011-04-29
公開日2011-07-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
4JBM
DownloadVisualize
BU of 4jbm by Molmil
Structure of murine DNA binding protein bound with ds DNA
分子名称: DNA (5'-D(*GP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3'), Interferon-inducible protein AIM2
著者Ru, H, Ni, X, Crowley, C, Zhao, L, Ding, W, Hung, L.-W, Shaw, N, Cheng, G, Liu, Z.-J.
登録日2013-02-19
公開日2013-06-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.218 Å)
主引用文献Structural basis for termination of AIM2-mediated signaling by p202
Cell Res., 23, 2013
3QZU
DownloadVisualize
BU of 3qzu by Molmil
Crystal structure of Bacillus subtilis Lipase A 7-fold mutant; the outcome of directed evolution towards thermostability
分子名称: CHLORIDE ION, GLYCEROL, Lipase estA, ...
著者Pijning, T, Augustyniak, W, Reetz, M.T, Dijkstra, B.W.
登録日2011-03-07
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Biophysical characterization of mutants of Bacillus subtilis lipase evolved for thermostability: Factors contributing to increased activity retention.
Protein Sci., 21, 2012
3R75
DownloadVisualize
BU of 3r75 by Molmil
Crystal structure of 2-amino-2-desoxyisochorismate synthase (ADIC) synthase PhzE from Burkholderia lata 383 in complex with benzoate, pyruvate, glutamine and contaminating Zn2+
分子名称: Anthranilate/para-aminobenzoate synthases component I, BENZOIC ACID, MAGNESIUM ION, ...
著者Li, Q.A, Mavrodi, D.V, Thomashow, L.S, Roessle, M, Blankenfeldt, W.
登録日2011-03-22
公開日2011-03-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Ligand Binding Induces an Ammonia Channel in 2-Amino-2-desoxyisochorismate (ADIC) Synthase PhzE.
J.Biol.Chem., 286, 2011
4J84
DownloadVisualize
BU of 4j84 by Molmil
Crystal structure of beta'-COP/Scyl1 complex
分子名称: Coatomer subunit beta', SCYL1
著者Ma, W, Goldberg, J.
登録日2013-02-14
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.473 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
4J8G
DownloadVisualize
BU of 4j8g by Molmil
Crystal structure of alpha-COP/E19 complex
分子名称: coatomer subunit alpha, membrane glycoprotein E3 gp19K
著者Ma, W, Goldberg, J.
登録日2013-02-14
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
3R1E
DownloadVisualize
BU of 3r1e by Molmil
Crystal structure of GC(8BrG)GCGGC duplex
分子名称: BROMIDE ION, CALCIUM ION, GLYCEROL, ...
著者Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W.
登録日2011-03-10
公開日2011-06-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (0.972 Å)
主引用文献Crystal structures of CGG RNA repeats with implications for fragile X-associated tremor ataxia syndrome.
Nucleic Acids Res., 39, 2011
4J79
DownloadVisualize
BU of 4j79 by Molmil
Crystal structure of beta'-COP/PEDVspike complex
分子名称: Coatomer subunit beta', Spike glycoprotein
著者Ma, W, Goldberg, J.
登録日2013-02-12
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.559 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
3RZG
DownloadVisualize
BU of 3rzg by Molmil
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
分子名称: 5'-D(*CP*TP*GP*TP*CP*AP*TP*CP*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*TP*GP*AP*CP*A)-3', Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, ...
著者Yi, C, Chen, B, Qi, B, Zhang, W, Jia, G, Zhang, L, Li, C, Dinner, A, Yang, C, He, C.
登録日2011-05-11
公開日2012-06-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3RZM
DownloadVisualize
BU of 3rzm by Molmil
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
分子名称: 5'-D(*AP*TP*GP*TP*AP*TP*AP*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*TP*AP*TP*AP*CP*A)-3', Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, ...
著者Yi, C, Chen, B, Qi, B, Zhang, W, Jia, G, Zhang, L, Li, C, Dinner, A, Yang, C, He, C.
登録日2011-05-11
公開日2012-06-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
4J78
DownloadVisualize
BU of 4j78 by Molmil
Crystal structure of beta'-COP/Emp47p complex
分子名称: Coatomer subunit beta', Emp47p
著者Ma, W, Goldberg, J.
登録日2013-02-12
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.478 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
3RUE
DownloadVisualize
BU of 3rue by Molmil
Alternative analogs as viable substrates of UDP-hexose 4-epimerases
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UNKNOWN LIGAND, WbgU
著者Bhatt, V.S, Guan, W, Wang, P.G.
登録日2011-05-05
公開日2011-05-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Alternative analogs as viable substrates of UDP-hexose 4-epimerases
TO BE PUBLISHED
4J9P
DownloadVisualize
BU of 4j9p by Molmil
Human DNA polymerase eta-DNA postinsertion binary complex with TA base pair
分子名称: DNA (5'-D(*C*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), DNA polymerase eta, ...
著者Zhao, Y, Gregory, M, Biertumpfel, C, Hua, Y, Hanaoka, F, Yang, W.
登録日2013-02-16
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Proc.Natl.Acad.Sci.USA, 110, 2013

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon