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PDB: 12479 件

1ZOD
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Crystal structure of dialkylglycine decarboxylase bound with cesium ion
分子名称: 2,2-dialkylglycine decarboxylase, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CESIUM ION, ...
著者Liu, W, Toney, M.D.
登録日2005-05-12
公開日2006-08-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of dialkylglycine decarboxylase bound with cesium ion and calcium ion
To be Published
1ZN1
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Coordinates of RRF fitted into Cryo-EM map of the 70S post-termination complex
分子名称: 30S ribosomal protein S12, Ribosome recycling factor, ribosomal 16S RNA, ...
著者Gao, N, Zavialov, A.V, Li, W, Sengupta, J, Valle, M, Gursky, R.P, Ehrenberg, M, Frank, J.
登録日2005-05-11
公開日2005-06-14
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (14.1 Å)
主引用文献Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Mol.Cell, 18, 2005
1ZB7
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Crystal Structure of Botulinum Neurotoxin Type G Light Chain
分子名称: CITRATE ANION, ZINC ION, neurotoxin
著者Arndt, J.W, Yu, W, Bi, F, Stevens, R.C.
登録日2005-04-07
公開日2005-07-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of botulinum neurotoxin type g light chain: serotype divergence in substrate recognition
Biochemistry, 44, 2005
6LWT
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Crystal structure of Staphylococcal Superantigen-Like protein 10
分子名称: Superantigen-like protein SSL10
著者Nan, J, Chengliang, W, Tianrong, H.
登録日2020-02-08
公開日2021-02-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Staphylococcal Superantigen-Like protein 10
To Be Published
6LZU
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F411A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
登録日2020-02-19
公開日2021-02-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6LZV
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F437A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
登録日2020-02-19
公開日2021-02-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6LZW
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W513A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
登録日2020-02-19
公開日2021-02-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6LZT
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N409A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MAGNESIUM ION, ...
著者Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
登録日2020-02-19
公開日2021-02-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.853 Å)
主引用文献A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6LZQ
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BU of 6lzq by Molmil
Chitin-specific solute binding protein from Vibrio harveyi in complex with chitotriose.
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CALCIUM ION, ...
著者Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
登録日2020-02-19
公開日2021-02-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6M4R
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Structure of Human Serum Albumin
分子名称: Serum albumin
著者Xiang, W, Su, J.
登録日2020-03-09
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure of Human Serum Albumin
To Be Published
1Z28
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Crystal Structures of SULT1A2 and SULT1A1*3: Implications in the bioactivation of N-hydroxy-2-acetylamino fluorine (OH-AAF)
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Phenol-sulfating phenol sulfotransferase 1
著者Lu, J, Li, H, Liu, M.C, Zhang, J, Li, M, An, X, Chang, W.
登録日2005-03-07
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of SULT1A2 and SULT1A1 *3: insights into the substrate inhibition and the role of Tyr149 in SULT1A2.
Biochem.Biophys.Res.Commun., 396, 2010
6M73
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Crystal structure of Enterococcus hirae L-lactate oxidase in complex with D-lactate form ligand
分子名称: 1,2-ETHANEDIOL, 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Yoshida, H, Hiraka, K, Tsugawa, W, Sode, K.
登録日2020-03-16
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of lactate oxidase from Enterococcus hirae revealed new aspects of active site loop function: Product-inhibition mechanism and oxygen gatekeeper
Protein Sci., 31, 2022
6M74
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Crystal structure of Enterococcus hirae L-lactate oxidase M207L in complex with D-lactate form ligand
分子名称: 1,2-ETHANEDIOL, 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Yoshida, H, Hiraka, K, Tsugawa, W, Sode, K.
登録日2020-03-16
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structure of lactate oxidase from Enterococcus hirae revealed new aspects of active site loop function: Product-inhibition mechanism and oxygen gatekeeper
Protein Sci., 31, 2022
1ZBI
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Bacillus halodurans RNase H catalytic domain mutant D132N in complex with 12-mer RNA/DNA hybrid
分子名称: 5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3', 5'-R(*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*C)-3', MAGNESIUM ION, ...
著者Nowotny, M, Gaidamakov, S.A, Crouch, R.J, Yang, W.
登録日2005-04-08
公開日2005-07-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structures of RNase H Bound to an RNA/DNA Hybrid: Substrate Specificity and Metal-Dependent Catalysis.
Cell(Cambridge,Mass.), 121, 2005
1ZBF
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Crystal structure of B. halodurans RNase H catalytic domain mutant D132N
分子名称: SULFATE ION, ribonuclease H-related protein
著者Nowotny, M, Gaidamakov, S.A, Crouch, R.J, Yang, W.
登録日2005-04-08
公開日2005-07-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structures of RNase H Bound to an RNA/DNA Hybrid: Substrate Specificity and Metal-Dependent Catalysis.
Cell(Cambridge,Mass.), 121, 2005
6LZP
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The solution structure of N-terminal elongated hSNF5 RPT1 domain
分子名称: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
著者Lee, W, Han, J, Kim, I, Suh, J.Y.
登録日2020-02-19
公開日2020-12-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Coil-to-Helix Transition Serves as a Binding Motif for hSNF5 and BAF155 Interaction.
Int J Mol Sci, 21, 2020
1ZGU
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Solution structure of the human Mms2-Ubiquitin complex
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 variant 2
著者Lewis, M.J, Saltibus, L.F, Hau, D.D, Xiao, W, Spyracopoulos, L.
登録日2005-04-22
公開日2006-04-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Basis for Non-Covalent Interaction Between Ubiquitin and the Ubiquitin Conjugating Enzyme Variant Human MMS2.
J.Biomol.Nmr, 34, 2006
1YVK
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Crystal Structure of the Bacillis subtilis Acetyltransferase in complex with CoA, Northeast Structural Genomics Target SR237.
分子名称: COENZYME A, hypothetical protein BSU33890
著者Forouhar, F, Yong, W, Xiao, R, Ciano, M, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2005-02-15
公開日2005-02-22
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Crystal Structure of the Bacillis subtilis Acetyltransferase in complex with CoA, Northeast Structural Genomics Target SR237.
To be Published
1ZMH
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Crystal structure of human neutrophil peptide 2, HNP-2 (variant Gly16-> D-Ala)
分子名称: GLYCEROL, HEXAETHYLENE GLYCOL, Neutrophil defensin 2, ...
著者Lubkowski, J, Prahl, A, Lu, W.
登録日2005-05-10
公開日2005-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Reconstruction of the conserved beta-bulge in mammalian defensins using D-amino acids.
J.Biol.Chem., 280, 2005
6MKS
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Cryo-EM structure of NLRC4-CARD filament
分子名称: Chimera protein of NLR family CARD domain-containing protein 4 and EGFP
著者Zheng, W, Matyszewski, M, Sohn, J, Egelman, E.H.
登録日2018-09-26
公開日2018-11-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of the NLRC4CARDfilament provides insights into how symmetric and asymmetric supramolecular structures drive inflammasome assembly.
J. Biol. Chem., 293, 2018
1YJX
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Crystal structure of human B type phosphoglycerate mutase
分子名称: CHLORIDE ION, CITRIC ACID, Phosphoglycerate mutase 1
著者Wang, Y, Wei, Z, Liu, L, Gong, W.
登録日2005-01-16
公開日2005-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of human B-type phosphoglycerate mutase bound with citrate.
Biochem.Biophys.Res.Commun., 331, 2005
1YAX
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Cystal structure Analysis of S.typhimurium PhoQ sensor domain with Calcium
分子名称: CALCIUM ION, Virulence sensor protein phoQ, sensor domain
著者Cho, U.S, Xu, W.
登録日2004-12-17
公開日2005-12-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Metal bridges between the PhoQ sensor domain and the membrane regulate transmembrane signaling.
J.Mol.Biol., 356, 2006
6MKF
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Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the imipenem-bound form
分子名称: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, SULFATE ION, penicillin binding protein 5 (PBP5)
著者Moon, T.M, Lee, C, D'Andrea, E.D, Peti, W, Page, R.
登録日2018-09-25
公開日2018-10-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
6MKH
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Crystal structure of pencillin binding protein 4 (PBP4) from Enterococcus faecalis in the imipenem-bound form
分子名称: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, PHOSPHATE ION, pencillin binding protein 4 (PBP4)
著者D'Andrea, E.D, Moon, T.M, Peti, W, Page, R.
登録日2018-09-25
公開日2018-10-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献The structures of penicillin-binding protein 4 (PBP4) and PBP5 fromEnterococciprovide structural insights into beta-lactam resistance.
J. Biol. Chem., 293, 2018
1YHN
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Structure basis of RILP recruitment by Rab7
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rab interacting lysosomal protein, ...
著者Wu, M, Wang, T, Hong, W, Song, H.
登録日2005-01-10
公開日2005-05-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for recruitment of RILP by small GTPase Rab7.
Embo J., 24, 2005

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