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PDB: 12479 件

2VWL
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Aminopyrrolidine Factor Xa inhibitor
分子名称: 5-CHLORO-THIOPHENE-2-CARBOXYLIC ACID ((3R,5S)-1-{[2-FLUORO-4-(2-OXO-PYRIDIN-1-YL)-PHENYLCARBAMOYL]-METHYL}-5-HYDROXYMETHYL-PYRROLIDIN-3-YL)-AMIDE, ACTIVATED FACTOR XA HEAVY CHAIN, CALCIUM ION, ...
著者Groebke-Zbinden, K, Banner, D.W, Benz, J.M, Blasco, F, Decoret, G, Himber, J, Kuhn, B, Panday, N, Ricklin, F, Risch, P, Schlatter, D, Stahl, M, Unger, R, Haap, W.
登録日2008-06-26
公開日2009-07-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Design of Novel Aminopyrrolidine Factor Xa Inhibitors from a Screening Hit.
Eur.J.Med.Chem., 44, 2009
2E5R
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Solution structure of the ZZ domain of Dystrobrevin alpha (Dystrobrevin-alpha)
分子名称: Dystrobrevin alpha, ZINC ION
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-22
公開日2007-06-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the ZZ domain of Dystrobrevin alpha (Dystrobrevin-alpha)
To be Published
1CVI
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CRYSTAL STRUCTURE OF HUMAN PROSTATIC ACID PHOSPHATASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCINE, ...
著者Jakob, C.G, Lewinski, K, Kuciel, R, Ostrowski, W, Lebioda, L.
登録日1999-08-23
公開日1999-08-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of human prostatic acid phosphatase .
Prostate, 42, 2000
2E6N
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Solution structure of the TUDOR domain of Staphylococcal nuclease domain-containing protein 1
分子名称: Staphylococcal nuclease domain-containing protein 1
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-27
公開日2007-07-03
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the TUDOR domain of Staphylococcal nuclease domain-containing protein 1
To be Published
2EPP
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Solution structure of the first C2H2 type zinc finger domain of Zinc finger protein 278
分子名称: POZ-, AT hook-, and zinc finger-containing protein 1, ...
著者Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2008-02-12
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the first C2H2 type zinc finger domain of Zinc finger protein 278
To be Published
1ASX
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APICAL DOMAIN OF THE CHAPERONIN FROM THERMOPLASMA ACIDOPHILUM
分子名称: PHOSPHATE ION, THERMOSOME
著者Klumpp, M, Baumeister, W, Essen, L.-O.
登録日1997-08-11
公開日1997-12-03
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the substrate binding domain of the thermosome, an archaeal group II chaperonin.
Cell(Cambridge,Mass.), 91, 1997
2EQY
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Solution structure of the ARID domain of Jarid1b protein
分子名称: Jumonji, AT rich interactive domain 1B
著者Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2007-10-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the ARID domain of Jarid1b protein
To be Published
2E5Q
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Solution structure of the TUDOR domain of PHD finger protein 19, isoform b [Homo sapiens]
分子名称: PHD finger protein 19
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-22
公開日2007-06-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the TUDOR domain of PHD finger protein 19, isoform b [Homo sapiens]
To be Published
2E70
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Solution structure of the fifth KOW motif of human transcription elongation factor SPT5
分子名称: Transcription elongation factor SPT5
著者Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-01-05
公開日2007-07-10
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the fifth KOW motif of human transcription elongation factor SPT5
To be Published
1BMV
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PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION
分子名称: PROTEIN (ICOSAHEDRAL VIRUS - A DOMAIN), PROTEIN (ICOSAHEDRAL VIRUS - B AND C DOMAIN), RNA (5'-R(*GP*GP*UP*CP*AP*AP*AP*AP*UP*GP*C)-3')
著者Chen, Z, Stauffacher, C, Li, Y, Schmidt, T, Bomu, W, Kamer, G, Shanks, M, Lomonossoff, G, Johnson, J.E.
登録日1989-10-09
公開日1989-10-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Protein-RNA interactions in an icosahedral virus at 3.0 A resolution.
Science, 245, 1989
1BQB
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AUREOLYSIN, STAPHYLOCOCCUS AUREUS METALLOPROTEINASE
分子名称: CALCIUM ION, PROTEIN (AUREOLYSIN), ZINC ION
著者Medrano, F.J, Banbula, A, Potempa, J, Travis, J, Bode, W.
登録日1998-07-14
公開日1999-01-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Amino-acid sequence and three-dimensional structure of the Staphylococcus aureus metalloproteinase at 1.72 A resolution.
Structure, 6, 1998
2ECR
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Crystal structure of the ligand-free form of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
分子名称: flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase
著者Kim, S.H, Hisano, T, Iwasaki, W, Ebihara, A, Miki, K.
登録日2007-02-13
公開日2008-01-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the flavin reductase component (HpaC) of 4-hydroxyphenylacetate 3-monooxygenase from Thermus thermophilus HB8: Structural basis for the flavin affinity
Proteins, 70, 2008
2VG2
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Rv2361 with IPP
分子名称: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, CHLORIDE ION, DIPHOSPHATE, ...
著者Naismith, J.H, Wang, W, Dong, C.
登録日2007-11-07
公開日2007-11-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The structural basis of chain length control in Rv1086.
J. Mol. Biol., 381, 2008
2VDF
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Structure of the OpcA adhesion from Neisseria meningitidis determined by crystallization from the cubic mesophase
分子名称: N-OCTANE, OUTER MEMBRANE PROTEIN, SULFATE ION
著者Cherezov, V, Liu, W, Derrick, J.P, Luan, B, Aksimentiev, A, Katritch, V, Caffrey, M.
登録日2007-10-05
公開日2007-10-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献In meso crystal structure and docking simulations suggest an alternative proteoglycan binding site in the OpcA outer membrane adhesin.
Proteins, 71, 2008
2VG3
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Rv2361 with citronellyl pyrophosphate
分子名称: CHLORIDE ION, GERANYL DIPHOSPHATE, GLYCEROL, ...
著者Naismith, J.H, Wang, W, Dong, C.
登録日2007-11-08
公開日2008-05-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis of chain length control in Rv1086.
J. Mol. Biol., 381, 2008
2V11
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Crystal Structure of Renin with Inhibitor 6
分子名称: (2S,4S,5R,7R)-4-AMINO-8-(BUTYLAMINO)-5-HYDROXY-2,7-DIMETHYL-8-OXOOCTYL 1-BENZYL-1H-INDOLE-3-CARBOXYLATE, RENIN
著者Rahuel, J, Rasetti, V, Maibaum, J, Rueger, H, Goschke, R, Cohen, N.C, Stutz, S, Cumin, F, Fuhrer, W, Wood, J.M, Grutter, M.G.
登録日2007-05-21
公開日2007-07-03
最終更新日2019-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure-Based Drug Design: The Discovery of Novel Nonpeptide Orally Active Inhibitors of Human Renin
Chem.Biol., 7, 2000
1C0K
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CRYSTAL STRUCTURE ANALYSIS OF D-AMINO ACID OXIDASE IN COMPLEX WITH L-LACTATE
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, LACTIC ACID, PROTEIN (D-AMINO ACID OXIDASE)
著者Umhau, S, Molla, G, Diederichs, K, Pilone, M.S, Ghisla, S, Welte, W, Pollegioni, L.
登録日1999-07-16
公開日2000-11-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献The x-ray structure of D-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation.
Proc.Natl.Acad.Sci.USA, 97, 2000
2V6V
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The structure of the Bem1p PX domain
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BUD EMERGENCE PROTEIN 1
著者Stahelin, R.V, Karathanassis, D, Murray, D, Williams, R.L, Cho, W.
登録日2007-07-21
公開日2007-07-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Membrane Binding Analysis of the Phox Homology Domain of Bem1P: Basis of Phosphatidylinositol 4-Phosphate Specificity.
J.Biol.Chem., 282, 2007
2WPA
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Optimisation of 6,6-Dimethyl Pyrrolo 3,4-c pyrazoles: Identification of PHA-793887, a Potent CDK Inhibitor Suitable for Intravenous Dosing
分子名称: CELL DIVISION PROTEIN KINASE 2, CYCLIN A2, N-{6,6-DIMETHYL-5-[(1-METHYLPIPERIDIN-4-YL)CARBONYL]-1,4,5,6-TETRAHYDROPYRROLO[3,4-C]PYRAZOL-3-YL}-3-METHYLBUTANAMIDE, ...
著者Brasca, M.G, Albanese, C, Alzani, R, Amici, R, Avanzi, N, Ballinari, D, Bischoff, J, Borghi, D, Casale, E, Croci, V, Fiorentini, F, Isacchi, A, Mercurio, C, Nesi, M, Orsini, P, Pastori, W, Pesenti, E, Pevarello, P, Roussel, P, Varasi, M, Volpi, D, Vulpetti, A, Ciomei, M.
登録日2009-08-03
公開日2010-02-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Optimization of 6,6-Dimethyl Pyrrolo[3,4-C]Pyrazoles: Identification of Pha-793887, a Potent Cdk Inhibitor Suitable for Intravenous Dosing.
Bioorg.Med.Chem., 18, 2010
2BU8
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crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands
分子名称: ADENOSINE-5'-DIPHOSPHATE, DICHLORO-ACETIC ACID, MAGNESIUM ION, ...
著者Knoechel, T.R, Tucker, A.D, Robinson, C.M, Phillips, C, Taylor, W, Bungay, P.J, Kasten, S.A, Roche, T.E, Brown, D.G.
登録日2005-06-08
公開日2006-02-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Regulatory Roles of the N-Terminal Domain Based on Crystal Structures of Human Pyruvate Dehydrogenase Kinase 2 Containing Physiological and Synthetic Ligands.
Biochemistry, 45, 2006
1BV8
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RECEPTOR DOMAIN FROM ALPHA-2-MACROGLOBULIN
分子名称: ALPHA-2-MACROGLOBULIN
著者Huang, W, Dolmer, K, Liao, X, Gettins, P.G.W.
登録日1998-09-22
公開日2000-04-05
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献NMR solution structure of complement-like repeat CR8 from the low density lipoprotein receptor-related protein.
J.Biol.Chem., 274, 1999
1BPR
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NMR STRUCTURE OF THE SUBSTRATE BINDING DOMAIN OF DNAK, MINIMIZED AVERAGE STRUCTURE
分子名称: DNAK
著者Wang, H, Kurochkin, A.V, Pang, Y, Hu, W, Flynn, G.C, Zuiderweg, E.R.P.
登録日1998-08-11
公開日1999-03-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR solution structure of the 21 kDa chaperone protein DnaK substrate binding domain: a preview of chaperone-protein interaction.
Biochemistry, 37, 1998
2BNW
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Structural basis for cooperative binding of Ribbon-Helix-Helix Omega repressor to direct DNA heptad repeats
分子名称: 5'-D(*CP*TP*TP*GP*TP*GP*AP*TP*TP*TP *GP*TP*GP*AP*TP*TP*CP*G)-3', 5'-D(*GP*AP*AP*TP*CP*AP*CP*AP*AP*AP *TP*CP*AP*CP*AP*AP*GP*C)-3', ORF OMEGA
著者Weihofen, W.A, Cicek, A, Pratto, F, Alonso, J.C, Saenger, W.
登録日2005-04-05
公開日2006-03-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structures of Omega Repressors Bound to Direct and Inverted DNA Repeats Explain Modulation of Transcription.
Nucleic Acids Res., 34, 2006
2WVN
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Structure of the HET-s N-terminal domain
分子名称: SMALL S PROTEIN
著者Greenwald, J, Buhtz, C, Ritter, C, Kwiatkowski, W, Choe, S, Saupe, S.J, Riek, R.
登録日2009-10-19
公開日2010-07-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献The Mechanism of Prion Inhibition by Het-S.
Mol.Cell, 38, 2010
1C6O
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CRYSTAL STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS
分子名称: CYTOCHROME C6, PROTOPORPHYRIN IX CONTAINING FE
著者Schnackenberg, J, Than, M.E, Mann, K, Wiegand, G, Huber, R, Reuter, W.
登録日1999-04-07
公開日2000-04-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Amino acid sequence, crystallization and structure determination of reduced and oxidized cytochrome c6 from the green alga Scenedesmus obliquus.
J.Mol.Biol., 290, 1999

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