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PDB: 12479 results

8AC5
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BU of 8ac5 by Molmil
Complex III2 from Yarrowia lipolytica, with decylubiquinol, oxidised, b-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-05
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
3K5L
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BU of 3k5l by Molmil
Crystal structure of E.coli Pol II-abasic DNA-dATP Lt(0, 3) ternary complex
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*GP*TP*GP*CP*CP*TP*AP*GP*CP*GP*TP*AP*(DOC))-3'), DNA (5'-D(*TP*AP*TP*(3DR)P*GP*TP*AP*CP*GP*CP*TP*AP*GP*GP*CP*AP*CP*A)-3'), ...
Authors:Yang, W, Wang, F.
Deposit date:2009-10-07
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insight into translesion synthesis by DNA Pol II.
Cell(Cambridge,Mass.), 139, 2009
8ABI
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BU of 8abi by Molmil
Complex III2 from Yarrowia lipolytica,antimycin A bound, int-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
1OJG
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BU of 1ojg by Molmil
Sensory domain of the membraneous two-component fumarate sensor DcuS of E. coli
Descriptor: SENSOR PROTEIN DCUS
Authors:Pappalardo, L, Janausch, I.G, Vijayan, V, Zientz, E, Junker, J, Peti, W, Zweckstetter, M, Unden, G, Griesinger, C.
Deposit date:2003-07-10
Release date:2003-08-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The NMR structure of the sensory domain of the membranous two-component fumarate sensor (histidine protein kinase) DcuS of Escherichia coli.
J. Biol. Chem., 278, 2003
8AB9
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BU of 8ab9 by Molmil
Complex III2 from Yarrowia lipolytica, ascorbate-reduced, b-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8AB7
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BU of 8ab7 by Molmil
Complex III2 from Yarrowia lipolytica, atovaquone and antimycin A bound
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, 2-[trans-4-(4-chlorophenyl)cyclohexyl]-3-hydroxynaphthalene-1,4-dione, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8AB6
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BU of 8ab6 by Molmil
Complex III2 from Yarrowia lipolytica, combined datasets, consensus refinement
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8ABB
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BU of 8abb by Molmil
Complex III2 from Yarrowia lipolytica, ascorbate-reduced, c-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8ABJ
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BU of 8abj by Molmil
Complex III2 from Yarrowia lipolytica, antimycin A bound, c-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8ABM
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BU of 8abm by Molmil
Complex III2 from Yarrowia lipolytica, apo, b-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8AC4
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BU of 8ac4 by Molmil
Complex III2 from Yarrowia lipolytica, apo, c-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-05
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8ABA
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BU of 8aba by Molmil
Complex III2 from Yarrowia lipolytica, ascorbate-reduced, int-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8ABE
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BU of 8abe by Molmil
Complex III2 from Yarrowia lipolytica, oxidised with ferricyanide, b-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
1OR4
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BU of 1or4 by Molmil
Crystal Structure of HemAT sensor domain from B.subtilis in the cyano-liganded form
Descriptor: CYANIDE ION, Heme-based aerotactic transducer hemAT, PROTOPORPHYRIN IX CONTAINING FE
Authors:Zhang, W, Phillips Jr, G.N.
Deposit date:2003-03-11
Release date:2003-09-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the oxygen sensor in Bacillus subtilis: signal transduction of chemotaxis by control of symmetry.
Structure, 11, 2003
8ABH
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BU of 8abh by Molmil
Complex III2 from Yarrowia lipolytica, antimycin A bound, b-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8AC3
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BU of 8ac3 by Molmil
Complex III2 from Yarrowia lipolytica, apo, int-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-05
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
3EYV
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BU of 3eyv by Molmil
Anti-Lewis Y Fab fragment with Lewis Y antigen in the presence of zinc ions
Descriptor: GLYCEROL, ZINC ION, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
Authors:Farrugia, W, Scott, A.M, Ramsland, P.A.
Deposit date:2008-10-22
Release date:2009-11-03
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A possible role for metallic ions in the carbohydrate cluster recognition displayed by a lewis y specific antibody.
Plos One, 4, 2009
8ABF
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BU of 8abf by Molmil
Complex III2 from Yarrowia lipolytica, oxidised with ferricyanide, int-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, CARDIOLIPIN, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8ABK
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BU of 8abk by Molmil
Complex III2 from Yarrowia lipolytica, decylubiquinol bound, b-position
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
8AB8
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BU of 8ab8 by Molmil
Complex III2, b-position, with decylubiquinone and ascorbate-reduced
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, ...
Authors:Wieferig, J.P, Kuhlbrandt, W.
Deposit date:2022-07-04
Release date:2023-01-11
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Analysis of the conformational heterogeneity of the Rieske iron-sulfur protein in complex III 2 by cryo-EM.
Iucrj, 10, 2023
3KEM
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BU of 3kem by Molmil
Crystal structure of IspH:IPP complex
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
2IS6
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BU of 2is6 by Molmil
Crystal structure of UvrD-DNA-ADPMgF3 ternary complex
Descriptor: 5'-D(*CP*GP*AP*GP*CP*AP*CP*TP*GP*CP*AP*GP*TP*GP*CP*TP*CP*GP*TP*TP*GP*TP*TP*AP*T)-3', ADENOSINE-5'-DIPHOSPHATE, DNA helicase II, ...
Authors:Yang, W, Lee, J.Y.
Deposit date:2006-10-16
Release date:2007-01-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke.
Cell(Cambridge,Mass.), 127, 2006
3KE9
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BU of 3ke9 by Molmil
Crystal structure of IspH:Intermediate-complex
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-24
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KEL
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BU of 3kel by Molmil
Crystal Structure of IspH:PP complex
Descriptor: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER, PYROPHOSPHATE 2-
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KWY
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BU of 3kwy by Molmil
Crystal structure of RXRalpha ligand binding domain in complex with triphenyltin and a coactivator fragment
Descriptor: ACETATE ION, Nuclear receptor coactivator 2 peptide, Retinoic acid receptor RXR-alpha, ...
Authors:le Maire, A, Bourguet, W.
Deposit date:2009-12-02
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A structural view of nuclear hormone receptor: endocrine disruptor interactions.
Cell.Mol.Life Sci., 67, 2010

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