6SMQ
| Structure of the RagAB peptide importer in the 'open-closed' state | Descriptor: | (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Lipoprotein RagB, ... | Authors: | White, J.B.R, Ranson, N.A, van den Berg, B. | Deposit date: | 2019-08-22 | Release date: | 2020-05-20 | Last modified: | 2020-08-05 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis. Nat Microbiol, 5, 2020
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6FOM
| Copper transporter OprC | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Putative copper transport outer membrane porin OprC | Authors: | Bhamidimarri, S.P, van den Berg, B. | Deposit date: | 2018-02-07 | Release date: | 2019-03-13 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site. Plos Biol., 19, 2021
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6GIE
| Crystal structure of the Acinetobacter baumannii outer membrane protein Omp33 | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 33-36 kDa outer membrane protein | Authors: | Abellon-Ruiz, J, Zahn, M, Basle, A, van den Berg, B. | Deposit date: | 2018-05-10 | Release date: | 2018-09-19 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure of the Acinetobacter baumannii outer membrane protein Omp33. Acta Crystallogr D Struct Biol, 74, 2018
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7VTZ
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1TLZ
| Tsx structure complexed with uridine | Descriptor: | Nucleoside-specific channel-forming protein tsx, URIDINE | Authors: | Ye, J, van den Berg, B. | Deposit date: | 2004-06-10 | Release date: | 2004-08-24 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Crystal structure of the bacterial nucleoside transporter Tsx. Embo J., 23, 2004
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2X4M
| Yersinia Pestis Plasminogen Activator Pla | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COAGULASE/FIBRINOLYSIN, SULFATE ION | Authors: | Eren, E, Murphy, M, Goguen, J, van den Berg, B. | Deposit date: | 2010-02-05 | Release date: | 2010-07-28 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.55 Å) | Cite: | An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis Structure, 18, 2010
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2F1C
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2X55
| Yersinia Pestis Plasminogen Activator Pla (Native) | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COAGULASE/FIBRINOLYSIN, SULFATE ION | Authors: | Eren, E, Murphy, M, Goguen, J, van den Berg, B. | Deposit date: | 2010-02-05 | Release date: | 2010-07-28 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis Structure, 18, 2010
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2X56
| Yersinia Pestis Plasminogen Activator Pla (Native) | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COAGULASE/FIBRINOLYSIN | Authors: | Eren, E, Murphy, M, Goguen, J, van den Berg, B. | Deposit date: | 2010-02-05 | Release date: | 2010-07-28 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis Structure, 18, 2010
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2X27
| Crystal structure of the outer membrane protein OprG from Pseudomonas aeruginosa | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, NICKEL (II) ION, OUTER MEMBRANE PROTEIN OPRG | Authors: | Touw, D.S, Patel, D.R, van den Berg, B. | Deposit date: | 2010-01-11 | Release date: | 2010-12-15 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | The Crystal Structure of Oprg from Pseudomonas Aeruginosa, a Potential Channel for Transport of Hydrophobic Molecules Across the Outer Membrane. Plos One, 5, 2010
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4KAX
| Crystal structure of the Grp1 PH domain in complex with Arf6-GTP | Descriptor: | ADP-ribosylation factor 6, CITRIC ACID, Cytohesin-3, ... | Authors: | Lambright, D.G, Malaby, A.W, van den Berg, B. | Deposit date: | 2013-04-23 | Release date: | 2013-08-14 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structural basis for membrane recruitment and allosteric activation of cytohesin family Arf GTPase exchange factors. Proc.Natl.Acad.Sci.USA, 110, 2013
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2ODJ
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4DCB
| Y. pestis Plasminogen Activator Pla in Complex with Human Plasminogen Activation Loop Peptide ALP11 | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ... | Authors: | Eren, E, van den Berg, B. | Deposit date: | 2012-01-17 | Release date: | 2012-06-06 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.033 Å) | Cite: | Structural basis for activation of an integral membrane protease by lipopolysaccharide. J.Biol.Chem., 287, 2012
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4FSO
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4FRX
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4FUV
| Crystal Structure of Acinetobacter baumannii CarO | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin protein associated with imipenem resistance | Authors: | Eren, E, van den Berg, B. | Deposit date: | 2012-06-28 | Release date: | 2013-07-10 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.151 Å) | Cite: | Outer membrane transport of amino acids and antibiotics by an 8-stranded b-barrel protein To be Published
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4FOZ
| Crystal Structure of OccD1 (OprD) Y282R/D307H | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Porin D | Authors: | Eren, E, van den Berg, B. | Deposit date: | 2012-06-21 | Release date: | 2013-03-13 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Toward Understanding the Outer Membrane Uptake of Small Molecules by Pseudomonas aeruginosa. J.Biol.Chem., 288, 2013
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4FRT
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1TLY
| Tsx structure | Descriptor: | Nucleoside-specific channel-forming protein tsx | Authors: | Ye, J, van den Berg, B. | Deposit date: | 2004-06-10 | Release date: | 2004-08-24 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (3.01 Å) | Cite: | Crystal structure of the bacterial nucleoside transporter Tsx. Embo J., 23, 2004
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1TLW
| Tsx structure complexed with thymidine | Descriptor: | Nucleoside-specific channel-forming protein tsx, THYMIDINE | Authors: | Ye, J, van den Berg, B. | Deposit date: | 2004-06-10 | Release date: | 2004-08-24 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Crystal structure of the bacterial nucleoside transporter Tsx. Embo J., 23, 2004
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3PGR
| Asp348Arg mutant of EcFadL | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Long-chain fatty acid transport protein | Authors: | Lepore, B.W, van den Berg, B, Indic, M, Hearn, E, Patel, D, Pham, H. | Deposit date: | 2010-11-02 | Release date: | 2011-05-25 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | From the Cover: Ligand-gated diffusion across the bacterial outer membrane. Proc.Natl.Acad.Sci.USA, 108, 2011
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3PGU
| Phe3Glu mutant of EcFadL | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Long-chain fatty acid transport protein, NICKEL (II) ION, ... | Authors: | Lepore, B.W, Indic, M, Pham, H, Hearn, E, Patel, D, van den Berg, B. | Deposit date: | 2010-11-02 | Release date: | 2011-05-25 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | From the Cover: Ligand-gated diffusion across the bacterial outer membrane. Proc.Natl.Acad.Sci.USA, 108, 2011
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4FSP
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4FT6
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2R4L
| Crystal structure of the long-chain fatty acid transporter FadL mutant P34A | Descriptor: | LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein | Authors: | Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B. | Deposit date: | 2007-08-31 | Release date: | 2008-09-16 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Transmembrane passage of hydrophobic compounds through a protein channel wall Nature, 458, 2009
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