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PDB: 59 results

6S02
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BU of 6s02 by Molmil
Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain - ADP bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat shock protein 70, MAGNESIUM ION
Authors:Vakonakis, I, Day, J.
Deposit date:2019-06-13
Release date:2019-10-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:ThePlasmodium falciparumHsp70-x chaperone assists the heat stress response of the malaria parasite.
Faseb J., 33, 2019
6RZY
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BU of 6rzy by Molmil
Plasmodium falciparum PFA0660w Hsp40 co-chaperone J-domain
Descriptor: Heat shock protein 40, type II
Authors:Vakonakis, I, Day, J.
Deposit date:2019-06-13
Release date:2019-10-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.379 Å)
Cite:ThePlasmodium falciparumHsp70-x chaperone assists the heat stress response of the malaria parasite.
Faseb J., 33, 2019
6RZQ
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BU of 6rzq by Molmil
Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain - ANP-PnP bound state
Descriptor: GLYCEROL, Heat shock protein 70, MAGNESIUM ION, ...
Authors:Vakonakis, I, Day, J.
Deposit date:2019-06-13
Release date:2019-10-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:ThePlasmodium falciparumHsp70-x chaperone assists the heat stress response of the malaria parasite.
Faseb J., 33, 2019
1Q6A
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BU of 1q6a by Molmil
Solution Structure of the C-terminal Domain of Thermosynechococcus elongatus KaiA (ThKaiA180C); Averaged Minimized Structure
Descriptor: Circadian clock protein KaiA homolog
Authors:Vakonakis, I, Sun, J, Holzenburg, A, Golden, S.S, LiWang, A.C.
Deposit date:2003-08-13
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: Implications for KaiA-KaiC interaction
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q6B
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BU of 1q6b by Molmil
Solution Structure of the C-terminal Domain of Thermosynechococcus elongatus KaiA (ThKaiA180C); Ensemble of 25 Structures
Descriptor: Circadian clock protein KaiA homolog
Authors:Vakonakis, I, Sun, J, Golden, S.S, Holzenburg, A, LiWang, A.C.
Deposit date:2003-08-13
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: implications for KaiA-KaiC interaction
Proc.Natl.Acad.Sci.USA, 101, 2004
3PYI
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BU of 3pyi by Molmil
Structure of the N-terminal domain of C. elegans SAS-6
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Spindle assembly abnormal protein 6, TETRAETHYLENE GLYCOL
Authors:Vakonakis, I, Steinmetz, M.O.
Deposit date:2010-12-13
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Structural basis of the 9-fold symmetry of centrioles.
Cell(Cambridge,Mass.), 144, 2011
2H45
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BU of 2h45 by Molmil
Solution structure of the second type III domain of human Fibronectin: ensemble of 25 structures
Descriptor: Fibronectin
Authors:Vakonakis, I, Campbell, I.D.
Deposit date:2006-05-23
Release date:2007-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Interdomain association in fibronectin: insight into cryptic sites and fibrillogenesis.
Embo J., 26, 2007
2H41
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BU of 2h41 by Molmil
Solution structure of the second type III domain of human Fibronectin: minimized average structure
Descriptor: Fibronectin
Authors:Vakonakis, I, Campbell, I.D.
Deposit date:2006-05-23
Release date:2007-04-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Interdomain association in fibronectin: insight into cryptic sites and fibrillogenesis.
Embo J., 26, 2007
2HA1
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BU of 2ha1 by Molmil
Complex of the first and second type III domains of human Fibronectin in solution
Descriptor: Fibronectin
Authors:Vakonakis, I, Campbell, I.D.
Deposit date:2006-06-12
Release date:2007-04-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Interdomain association in fibronectin: insight into cryptic sites and fibrillogenesis.
Embo J., 26, 2007
2JX9
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BU of 2jx9 by Molmil
Solution structure of the Gal_lectin domain of mouse Latrophilin-1 GPCR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Latrophilin 1
Authors:Vakonakis, I, Campbell, I.D.
Deposit date:2007-11-09
Release date:2008-04-29
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure and sugar-binding mechanism of mouse Latrophilin-1 RBL: a novel 7TM receptor-attached lectin-like domain.
To be Published
2JXA
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BU of 2jxa by Molmil
Mouse Latrophilin-1 GPCR Gal_lectin domain in complex with Rhamnose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Latrophilin 1, alpha-L-rhamnopyranose
Authors:Vakonakis, I, Campbell, I.D.
Deposit date:2007-11-09
Release date:2008-04-29
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Solution structure and sugar-binding mechanism of mouse Latrophilin-1 RBL: a novel 7TM receptor-attached lectin-like domain.
To be Published
1T4Z
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BU of 1t4z by Molmil
Solution structure of the N-terminal domain of Synechococcus elongatus SasA (25-structures ensemble)
Descriptor: Adaptive-response sensory-kinase sasA
Authors:Vakonakis, I, Klewer, D.A, LiWang, A.C.
Deposit date:2004-04-30
Release date:2004-11-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the N-terminal domain of the circadian clock-associated histidine kinase SasA.
J.Mol.Biol., 342, 2004
1SV1
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BU of 1sv1 by Molmil
NMR structure of the ThKaiA180C-CIIABD complex (25-structure ensemble)
Descriptor: Circadian clock protein KaiA, Circadian clock protein KaiC
Authors:Vakonakis, I, LiWang, A.C.
Deposit date:2004-03-26
Release date:2004-08-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1T4Y
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BU of 1t4y by Molmil
Solution structure of the N-terminal domain of Synechococcus elongatus SasA (average minimized structure)
Descriptor: Adaptive-response sensory-kinase sasA
Authors:Vakonakis, I, Klewer, D.A, LiWang, A.C.
Deposit date:2004-04-30
Release date:2004-11-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the N-terminal domain of the circadian clock-associated histidine kinase SasA.
J.Mol.Biol., 342, 2004
1SUY
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BU of 1suy by Molmil
NMR structure of the ThKaiA180C-CIIABD complex (average minimized structure)
Descriptor: circadian clock protein KaiA, circadian clock protein KaiC
Authors:Vakonakis, I, LiWang, A.C.
Deposit date:2004-03-26
Release date:2004-08-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
2LKL
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BU of 2lkl by Molmil
Structure of the core intracellular domain of PfEMP1
Descriptor: Erythrocyte membrane protein 1 (PfEMP1)
Authors:Vakonakis, I, Erat, M.C.
Deposit date:2011-10-16
Release date:2012-01-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Analysis of the Plasmodium falciparum Erythrocyte Membrane Protein 1 (PfEMP1) Intracellular Domain Reveals a Conserved Interaction Epitope.
J.Biol.Chem., 287, 2012
3MQL
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BU of 3mql by Molmil
Crystal structure of the fibronectin 6FnI1-2FnII7FnI fragment
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Erat, M.C, Campbell, I.D, Vakonakis, I.
Deposit date:2010-04-28
Release date:2010-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Implications for collagen binding from the crystallographic structure of fibronectin 6FnI1-2FnII7FnI
J.Biol.Chem., 285, 2010
4GEX
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BU of 4gex by Molmil
Structure of a stabilised ceSAS-6 dimer, second crystal form
Descriptor: SULFATE ION, Spindle assembly abnormal protein 6
Authors:Erat, M.C, Vakonakis, I.
Deposit date:2012-08-02
Release date:2013-06-19
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Caenorhabditis elegans centriolar protein SAS-6 forms a spiral that is consistent with imparting a ninefold symmetry.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GEU
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BU of 4geu by Molmil
Structure of a stabilised ceSAS-6 dimer
Descriptor: GLYCEROL, Spindle assembly abnormal protein 6, TETRAETHYLENE GLYCOL
Authors:Erat, M.C, Vakonakis, I.
Deposit date:2012-08-02
Release date:2013-06-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Caenorhabditis elegans centriolar protein SAS-6 forms a spiral that is consistent with imparting a ninefold symmetry.
Proc.Natl.Acad.Sci.USA, 110, 2013
4G79
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BU of 4g79 by Molmil
Structure a C. elegans SAS-6 variant
Descriptor: GLYCEROL, Spindle assembly abnormal protein 6, TETRAETHYLENE GLYCOL
Authors:Erat, M.C, Vakonakis, I.
Deposit date:2012-07-20
Release date:2013-06-19
Last modified:2017-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Caenorhabditis elegans centriolar protein SAS-6 forms a spiral that is consistent with imparting a ninefold symmetry.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GFA
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BU of 4gfa by Molmil
N-terminal coiled-coil dimer of C.elegans SAS-6, crystal form A
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Spindle assembly abnormal protein 6
Authors:Erat, M.C, Vakonakis, I.
Deposit date:2012-08-03
Release date:2013-06-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Caenorhabditis elegans centriolar protein SAS-6 forms a spiral that is consistent with imparting a ninefold symmetry.
Proc.Natl.Acad.Sci.USA, 110, 2013
7NQZ
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BU of 7nqz by Molmil
Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with Z1827898537
Descriptor: (3S)-N-benzylpyrrolidin-3-amine, AMP PHOSPHORAMIDATE, CHLORIDE ION, ...
Authors:Mohamad, N, O'Donoghue, A, Kantsadi, A.L, Vakonakis, I.
Deposit date:2021-03-02
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.319 Å)
Cite:Structures of P. falciparum Hsp70-x nucleotide binding domain with small molecule ligands
To Be Published
7NQR
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BU of 7nqr by Molmil
Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with Z287256168
Descriptor: (S)-N-(1-cyclopropylethyl)-6-methylpicolinamide, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, AMP PHOSPHORAMIDATE, ...
Authors:Mohamad, N, O'Donoghue, A, Kantsadi, A.L, Vakonakis, I.
Deposit date:2021-03-02
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structures of P. falciparum Hsp70-x nucleotide binding domain with small molecule ligands
To Be Published
7NQU
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BU of 7nqu by Molmil
Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with Z396380540
Descriptor: AMP PHOSPHORAMIDATE, CHLORIDE ION, GLYCEROL, ...
Authors:Mohamad, N, O'Donoghue, A, Kantsadi, A.L, Vakonakis, I.
Deposit date:2021-03-02
Release date:2021-03-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structures of P. falciparum Hsp70-x nucleotide binding domain with small molecule ligands
To Be Published
7NQS
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BU of 7nqs by Molmil
Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with Z1203107138
Descriptor: 1-ethyl-N-[(4-fluorophenyl)methyl]-1H-pyrazole-4-carboxamide, AMP PHOSPHORAMIDATE, GLYCEROL, ...
Authors:Mohamad, N, O'Donoghue, A, Kantsadi, A.L, Vakonakis, I.
Deposit date:2021-03-02
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structures of P. falciparum Hsp70-x nucleotide binding domain with small molecule ligands
To Be Published

 

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