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PDB: 57 results

5ID8
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BU of 5id8 by Molmil
Crystal structure of CGL1 from Crassostrea gigas, ligand free form (CGL1/FREE)
Descriptor: Natterin-3
Authors:Unno, H.
Deposit date:2016-02-24
Release date:2016-06-29
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Identification, Characterization, and X-ray Crystallographic Analysis of a Novel Type of Mannose-Specific Lectin CGL1 from the Pacific Oyster Crassostrea gigas.
Sci Rep, 6, 2016
6LX2
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BU of 6lx2 by Molmil
Potato D-enzyme complexed with CA26
Descriptor: 4-alpha-glucanotransferase, chloroplastic/amyloplastic, 4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose-(1-4)-4-deoxy-alpha-D-glucopyranose, ...
Authors:Unno, H, Imamura, K.
Deposit date:2020-02-10
Release date:2020-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural analysis and reaction mechanism of the disproportionating enzyme (D-enzyme) from potato.
Protein Sci., 29, 2020
6LX1
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BU of 6lx1 by Molmil
Potato D-enzyme complexed with Acarbose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-1,5-anhydro-D-glucitol, 4-alpha-glucanotransferase, chloroplastic/amyloplastic, ...
Authors:Unno, H, Imamura, K.
Deposit date:2020-02-10
Release date:2020-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural analysis and reaction mechanism of the disproportionating enzyme (D-enzyme) from potato.
Protein Sci., 29, 2020
5IDA
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BU of 5ida by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannose-bound form (CGL1/MAN)
Descriptor: Natterin-3, beta-D-mannopyranose
Authors:Unno, H.
Deposit date:2016-02-24
Release date:2016-06-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Identification, Characterization, and X-ray Crystallographic Analysis of a Novel Type of Mannose-Specific Lectin CGL1 from the Pacific Oyster Crassostrea gigas.
Sci Rep, 6, 2016
5IDB
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BU of 5idb by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannose-bound form (CGL1/MAN2)
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Natterin-3, alpha-D-mannopyranose, ...
Authors:Unno, H.
Deposit date:2016-02-24
Release date:2016-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1 Å)
Cite:Identification, Characterization, and X-ray Crystallographic Analysis of a Novel Type of Mannose-Specific Lectin CGL1 from the Pacific Oyster Crassostrea gigas.
Sci Rep, 6, 2016
4P9N
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BU of 4p9n by Molmil
Crystal structure of sshesti PE mutant
Descriptor: Carboxylesterase
Authors:Unno, H.
Deposit date:2014-04-04
Release date:2014-07-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insights into the Low pH Adaptation of a Unique Carboxylesterase from Ferroplasma: ALTERING THE pH OPTIMA OF TWO CARBOXYLESTERASES.
J.Biol.Chem., 289, 2014
6M5M
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BU of 6m5m by Molmil
SPL-1 - GlcNAc complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, N-acetylglucosamine-specific lectin
Authors:Unno, H, Hatakeyama, T.
Deposit date:2020-03-11
Release date:2020-06-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Novel carbohydrate-recognition mode of the invertebrate C-type lectin SPL-1 from Saxidomus purpuratus revealed by the GlcNAc-complex crystal in the presence of Ca2.
Acta Crystallogr.,Sect.F, 76, 2020
8YFY
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BU of 8yfy by Molmil
CRYSTAL STRUCTURE OF THE EST1 H274D MUTANT AT PH 4.2
Descriptor: Carboxylesterase, octyl beta-D-glucopyranoside
Authors:Unno, H, Oshima, Y, Nishino, T, Nakayama, T, Kusunoki, M.
Deposit date:2024-02-26
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Lowering pH optimum of activity of SshEstI, a slightly alkaliphilic archaeal esterase of the hormone-sensitive lipase family.
J.Biosci.Bioeng., 2024
8YFZ
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BU of 8yfz by Molmil
CRYSTAL STRUCTURE OF THE EST1 H274E MUTANT AT PH 4.2
Descriptor: Carboxylesterase, octyl beta-D-glucopyranoside
Authors:Unno, H, Oshima, Y, Nishino, T, Nakayama, T, Kusunoki, M.
Deposit date:2024-02-26
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Lowering pH optimum of activity of SshEstI, a slightly alkaliphilic archaeal esterase of the hormone-sensitive lipase family.
J.Biosci.Bioeng., 2024
8JEA
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BU of 8jea by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannotriose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man)
Descriptor: ACETIC ACID, CACODYLATE ION, MAGNESIUM ION, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2023-05-15
Release date:2023-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis.
J.Biochem., 175, 2023
8JEB
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BU of 8jeb by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannotetraose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man(alpha)1-6Man)
Descriptor: ACETIC ACID, MAGNESIUM ION, Natterin-3, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2023-05-15
Release date:2023-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis.
J.Biochem., 175, 2023
8JE9
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BU of 8je9 by Molmil
Crystal structure of CGL1 from Crassostrea gigas, mannobiose-bound form (CGL1/Man(alpha)1-2Man)
Descriptor: ACETIC ACID, CACODYLATE ION, Natterin-3, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2023-05-15
Release date:2023-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1 Å)
Cite:Mannose oligosaccharide recognition of CGL1, a mannose-specific lectin containing DM9 motifs from Crassostrea gigas, revealed by X-ray crystallographic analysis.
J.Biochem., 175, 2023
5GMD
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BU of 5gmd by Molmil
Crystal structure of Sulfolobus solfataricus diphosphomevalonate decarboxylase in complex with ATP-gamma-S
Descriptor: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, ADENOSINE MONOPHOSPHATE, Diphosphomevalonate decarboxylase, ...
Authors:Unno, H, Hemmi, H, Hattori, A.
Deposit date:2016-07-13
Release date:2016-12-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Single Amino Acid Mutation Converts (R)-5-Diphosphomevalonate Decarboxylase into a Kinase
J. Biol. Chem., 292, 2017
5GME
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BU of 5gme by Molmil
Crystal structure of Sulfolobus solfataricus Diphosphomevalonate decarboxylase in complex with ADP
Descriptor: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Unno, H, Hemmi, H, Hattori, A.
Deposit date:2016-07-13
Release date:2016-12-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Single Amino Acid Mutation Converts (R)-5-Diphosphomevalonate Decarboxylase into a Kinase
J. Biol. Chem., 292, 2017
5H4S
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BU of 5h4s by Molmil
Crystal structure of a rhamnose-binding lectin SUL-I from the toxopneustid sea urchin Toxopneustes pileolus
Descriptor: L-rhamnose-binding lectin, PHOSPHATE ION, alpha-L-rhamnopyranose
Authors:Unno, H, Hatakeyama, T.
Deposit date:2016-11-02
Release date:2017-05-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Carbohydrate recognition by the rhamnose-binding lectin SUL-I with a novel three-domain structure isolated from the venom of globiferous pedicellariae of the flower sea urchin Toxopneustes pileolus
Protein Sci., 26, 2017
4WQQ
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BU of 4wqq by Molmil
Structure of EPNH mutant of CEL-I
Descriptor: CALCIUM ION, Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2014-10-22
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mannose-recognition mutant of the galactose/N-acetylgalactosamine-specific C-type lectin CEL-I engineered by site-directed mutagenesis.
Biochim.Biophys.Acta, 1850, 2015
3W9T
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BU of 3w9t by Molmil
pore-forming CEL-III
Descriptor: CALCIUM ION, Hemolytic lectin CEL-III, MAGNESIUM ION, ...
Authors:Unno, H, Goda, S, Hatakeyama, T.
Deposit date:2013-04-16
Release date:2014-03-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Hemolytic lectin CEL-III heptamer reveals its transmembrane pore-formation mechanism
J.Biol.Chem., 2014
6A56
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BU of 6a56 by Molmil
AJLec from the Sea Anemone Anthopleura japonica
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AJLec, CALCIUM ION, ...
Authors:Unno, H, Hatakeyama, T.
Deposit date:2018-06-22
Release date:2018-07-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Identification, Characterization, and X-ray Crystallographic Analysis of a Novel Type of Lectin AJLec from the Sea Anemone Anthopleura japonica.
Sci Rep, 8, 2018
4Z7C
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BU of 4z7c by Molmil
Diphosphomevalonate decarboxylase from the Sulfolobus solfataricus, space group h32
Descriptor: Diphosphomevalonate decarboxylase, GLYCEROL, PHOSPHATE ION, ...
Authors:Unno, H, Hattori, A, Hemmi, H.
Deposit date:2015-04-07
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:In Vivo Formation of the Protein Disulfide Bond That Enhances the Thermostability of Diphosphomevalonate Decarboxylase, an Intracellular Enzyme from the Hyperthermophilic Archaeon Sulfolobus solfataricus
J.Bacteriol., 197, 2015
7CC3
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BU of 7cc3 by Molmil
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: co-FG)
Descriptor: (2R)-3-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,2-diol, (2S)-3-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,2-diol, 2-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,3-diol, ...
Authors:Unno, H, Hemmi, H.
Deposit date:2020-06-16
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
7CAV
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BU of 7cav by Molmil
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: co-FG+DMAPP)
Descriptor: 2-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,3-diol, DIMETHYLALLYL DIPHOSPHATE, DIPHOSPHATE, ...
Authors:Unno, H, Hemmi, H.
Deposit date:2020-06-10
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
7CAR
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BU of 7car by Molmil
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: free+IPP)
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, PALMITIC ACID, PHOSPHATE ION, ...
Authors:Unno, H, Hemmi, H.
Deposit date:2020-06-10
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
7CAS
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BU of 7cas by Molmil
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: free+PPi)
Descriptor: DIPHOSPHATE, MAGNESIUM ION, PALMITIC ACID, ...
Authors:Unno, H, Hemmi, H.
Deposit date:2020-06-10
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
2D3B
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BU of 2d3b by Molmil
Crystal Structure of the Maize Glutamine Synthetase complexed with AMPPNP and Methionine sulfoximine
Descriptor: (2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC ACID, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M.
Deposit date:2005-09-26
Release date:2006-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
2D3A
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BU of 2d3a by Molmil
Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Methionine sulfoximine Phosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, MANGANESE (II) ION, ...
Authors:Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M.
Deposit date:2005-09-26
Release date:2006-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006

 

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