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PDB: 45 results

7P74
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BU of 7p74 by Molmil
The PDZ domain of SYNJ2BP complexed with the phosphorylated PDZ-binding motif of RSK1
Descriptor: CALCIUM ION, GLYCEROL, Ribosomal protein S6 kinase alpha-1, ...
Authors:Gogl, G, Cousido-Siah, A, Trave, G.
Deposit date:2021-07-19
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Quantitative fragmentomics allow affinity mapping of interactomes.
Nat Commun, 13, 2022
7P70
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BU of 7p70 by Molmil
The PDZ-domain of SNTB1 complexed with the PDZ-binding motif of HPV35-E6
Descriptor: Beta-1-syntrophin,Annexin A2, CALCIUM ION, GLYCEROL, ...
Authors:Gogl, G, Cousido-Siah, A, Trave, G.
Deposit date:2021-07-19
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Quantitative fragmentomics allow affinity mapping of interactomes.
Nat Commun, 13, 2022
7P71
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BU of 7p71 by Molmil
The PDZ domain of MAGI1_2 complexed with the PDZ-binding motif of HPV35-E6
Descriptor: CALCIUM ION, CITRIC ACID, GLYCEROL, ...
Authors:Gogl, G, Cousido-Siah, A, Trave, G.
Deposit date:2021-07-19
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Quantitative fragmentomics allow affinity mapping of interactomes.
Nat Commun, 13, 2022
7P72
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BU of 7p72 by Molmil
The PDZ domain of SNX27 complexed with the PDZ-binding motif of MERS-E
Descriptor: CALCIUM ION, Envelope small membrane protein, GLYCEROL, ...
Authors:Gogl, G, Cousido-Siah, A, Trave, G.
Deposit date:2021-07-19
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Quantitative fragmentomics allow affinity mapping of interactomes.
Nat Commun, 13, 2022
7Q43
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BU of 7q43 by Molmil
Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of dedicator of cytokinesis protein 10
Descriptor: CITRIC ACID, Dedicator of cytokinesis protein 10 peptide, E3 ubiquitin-protein ligase HERC2
Authors:Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
Deposit date:2021-10-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.40002346 Å)
Cite:Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of dedicator of cytokinesis protein 10
To Be Published
7Q41
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BU of 7q41 by Molmil
Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of ubiquitin-protein ligase E3A (E6AP)
Descriptor: CITRIC ACID, E3 ubiquitin-protein ligase HERC2, Ubiquitin-protein ligase E3A (E6AP) peptide
Authors:Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
Deposit date:2021-10-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.01478052 Å)
Cite:Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of ubiquitin-protein ligase E3A (E6AP)
To Be Published
7Q45
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BU of 7q45 by Molmil
Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of Myelin transcription factor 1
Descriptor: CITRIC ACID, E3 ubiquitin-protein ligase HERC2, Myelin transcription factor 1
Authors:Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
Deposit date:2021-10-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.09999585 Å)
Cite:Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of Myelin transcription factor 1
To Be Published
7Q42
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BU of 7q42 by Molmil
Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of chromatin reader BAZ2B
Descriptor: Bromodomain adjacent to zinc finger domain protein 2B, CITRIC ACID, E3 ubiquitin-protein ligase HERC2
Authors:Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
Deposit date:2021-10-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95002484 Å)
Cite:Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of chromatin reader BAZ2B
To Be Published
7Q40
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BU of 7q40 by Molmil
Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2
Descriptor: CITRIC ACID, E3 ubiquitin-protein ligase HERC2
Authors:Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
Deposit date:2021-10-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.35002232 Å)
Cite:Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2
To Be Published
7Q44
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BU of 7q44 by Molmil
Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of deubiquitinase USP35
Descriptor: CITRIC ACID, Deubiquitinase USP35 peptide, E3 ubiquitin-protein ligase HERC2
Authors:Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
Deposit date:2021-10-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.20007777 Å)
Cite:Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of deubiquitinase USP35
To Be Published
7Q46
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BU of 7q46 by Molmil
Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of pericentriolar material 1 protein
Descriptor: CITRIC ACID, E3 ubiquitin-protein ligase HERC2, Pericentriolar material 1 protein
Authors:Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
Deposit date:2021-10-29
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.46002531 Å)
Cite:Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of pericentriolar material 1 protein
To Be Published
2LJX
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BU of 2ljx by Molmil
Structure of the monomeric N-terminal domain of HPV16 E6 oncoprotein
Descriptor: Protein E6, ZINC ION
Authors:Zanier, K, Muhamed Sidi, A, Boulade-Ladame, C, Rybin, V, Chappelle, A, Atkinson, A, Kieffer, B, Trave, G.
Deposit date:2011-09-30
Release date:2012-04-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure Analysis of the HPV16 E6 Oncoprotein Reveals a Self-Association Mechanism Required for E6-Mediated Degradation of p53.
Structure, 20, 2012
2LJZ
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BU of 2ljz by Molmil
Structure of the C-terminal domain of HPV16 E6 oncoprotein
Descriptor: Protein E6, ZINC ION
Authors:Zanier, K, Muhamed Sidi, A, Boulade-Ladame, C, Rybin, V, Chappelle, A, Atkinson, A, Kieffer, B, Trave, G.
Deposit date:2011-09-30
Release date:2012-04-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure Analysis of the HPV16 E6 Oncoprotein Reveals a Self-Association Mechanism Required for E6-Mediated Degradation of p53.
Structure, 20, 2012
7R2T
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BU of 7r2t by Molmil
SYNJ2BP complex with a phosphorylated Vangl2 peptide at the P-1 position.
Descriptor: CALCIUM ION, GLYCEROL, Synaptojanin-2-binding protein,Annexin, ...
Authors:Carrasco, K, Cousido Siah, A, Gogl, G, Betzi, S, McEwen, A, Kostmann, C, Trave, G.
Deposit date:2022-02-05
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SYNJ2BP PDZ domain in complex with a synthetic Vangl2 peptide.
To Be Published
7R2M
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BU of 7r2m by Molmil
SYNJ2BP complex with a synthetic Vangl2 peptide (9mer).
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CALCIUM ION, GLYCEROL, ...
Authors:Carrasco, K, Cousido Siah, A, Gogl, G, Betzi, S, McEwen, A, Kostmann, C, Trave, G.
Deposit date:2022-02-04
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:SYNJ2BP PDZ domain in complex with a synthetic Vangl2 peptide.
To Be Published
6SJV
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BU of 6sjv by Molmil
Structure of HPV18 E6 oncoprotein in complex with mutant E6AP LxxLL motif
Descriptor: Maltodextrin-binding protein,Protein E6,Ubiquitin-protein ligase E3A, ZINC ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Suarez, I.P, Cousido-Siah, A, Bonhoure, A, Kostmann, C, Mitschler, A, Podjarny, A, Trave, G.
Deposit date:2019-08-14
Release date:2019-09-04
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.029 Å)
Cite:Cellular target recognition by HPV18 and HPV49 oncoproteins
To be published
6SMV
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BU of 6smv by Molmil
Structure of HPV49 E6 protein in complex with MAML1 LxxLL motif
Descriptor: DI(HYDROXYETHYL)ETHER, Maltose/maltodextrin-binding periplasmic protein,Protein E6,Mastermind-like protein 1, ZINC ION, ...
Authors:Suarez, I.P, Cousido-Siah, A, Bonhoure, A, Kostmann, C, Mitschler, A, Podjarny, A, Trave, G.
Deposit date:2019-08-22
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Cellular target recognition by HPV18 and HPV49 oncoproteins
To be published
6SIV
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BU of 6siv by Molmil
Structure of HPV16 E6 oncoprotein in complex with mutant IRF3 LxxLL motif
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Interferon regulatory factor 3, Protein E6, ZINC ION, ...
Authors:Suarez, I.P, Cousido-Siah, A, Bonhoure, A, Mitschler, A, Podjarny, A, Trave, G.
Deposit date:2019-08-12
Release date:2019-08-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Deciphering the molecular and structural interaction between IRF3 and HPV16 E6
To be published
2LJY
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BU of 2ljy by Molmil
Haddock model structure of the N-terminal domain dimer of HPV16 E6
Descriptor: Protein E6, ZINC ION
Authors:Zanier, K, Muhamed Sidi, A, Boulade-Ladame, C, Rybin, V, Chappelle, A, Atkinson, A, Kieffer, B, Trave, G.
Deposit date:2011-09-30
Release date:2012-04-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure Analysis of the HPV16 E6 Oncoprotein Reveals a Self-Association Mechanism Required for E6-Mediated Degradation of p53.
Structure, 20, 2012
2KPL
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BU of 2kpl by Molmil
MAGI-1 PDZ1 / E6CT
Descriptor: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1, Protein E6
Authors:Charbonnier, S, Nomine, Y, Ramirez, J, Luck, K, Stote, R.H, Trave, G, Kieffer, B, Atkinson, R.A.
Deposit date:2009-10-16
Release date:2010-10-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The structural and dynamic response of MAGI-1 PDZ1 with non-canonical domain boundaries to binding of human papillomavirus (HPV) E6
J.Mol.Biol., 2011
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