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PDB: 163 results

5OQE
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XFEL structure of the on state of a reversibly photoswitching fluorescent protein determined using the droplet injection method
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:Hutchison, C.D.M, Cordon-Preciado, V, Morgan, R.M.L, van Thor, J.J.
Deposit date:2017-08-11
Release date:2017-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:X-ray Free Electron Laser Determination of Crystal Structures of Dark and Light States of a Reversibly Photoswitching Fluorescent Protein at Room Temperature.
Int J Mol Sci, 18, 2017
1W7U
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BU of 1w7u by Molmil
Photoproduct of the Wild-Type Aequorea victoria Green Fluorescent Protein after structural annealing at 170K
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T.
Deposit date:2004-09-09
Release date:2005-07-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein
J.Biol.Chem., 280, 2005
8A6R
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BU of 8a6r by Molmil
Room temperature rsEGFP2 with a chlorinated chromophore 100 ps after Photoexcitation
Descriptor: Green fluorescent protein
Authors:Fadini, A, van Thor, J.
Deposit date:2022-06-18
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8A6N
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BU of 8a6n by Molmil
Room temperature rsEGFP2 with a chlorinated chromophore 300 fs after Photoexcitation
Descriptor: Green fluorescent protein
Authors:Fadini, A, van Thor, J.
Deposit date:2022-06-18
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8A6O
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BU of 8a6o by Molmil
Room temperature rsEGFP2 with a chlorinated chromophore 600 fs after Photoexcitation
Descriptor: Green fluorescent protein
Authors:Fadini, A, van Thor, J.
Deposit date:2022-06-18
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8A83
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rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Fadini, A, van Thor, J, Chang, J.
Deposit date:2022-06-21
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8A6S
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BU of 8a6s by Molmil
Room temperature rsEGFP2 with a chlorinated chromophore 1 microsecond after Photoexcitation
Descriptor: Green fluorescent protein
Authors:Fadini, A, van Thor, J.
Deposit date:2022-06-19
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8A6G
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BU of 8a6g by Molmil
Room temperature rsEGFP2 with a chlorinated chromophore in the non-fluorescent OFF-state
Descriptor: Green fluorescent protein
Authors:Fadini, A, van Thor, J.
Deposit date:2022-06-17
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8A6P
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BU of 8a6p by Molmil
Room temperature rsEGFP2 with a chlorinated chromophore 900 fs after photoexcitation
Descriptor: Green fluorescent protein
Authors:Fadini, A, van Thor, J.
Deposit date:2022-06-18
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8A6Q
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BU of 8a6q by Molmil
Room temperature rsEGFP2 with a chlorinated chromophore 5 ps after photoexcitation
Descriptor: Green fluorescent protein
Authors:Fadini, A, van Thor, J.
Deposit date:2022-06-18
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8A7V
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BU of 8a7v by Molmil
Room temperature rsEGFP2 in its OFF-state obtained with SFX
Descriptor: Green fluorescent protein
Authors:Fadini, A, van Thor, J.
Deposit date:2022-06-21
Release date:2023-07-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 145, 2023
8AM4
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BU of 8am4 by Molmil
Cl-rsEGFP2 Long Wavelength Structure
Descriptor: Green fluorescent protein
Authors:Orr, C.M, Fadini, A, van Thor, J.
Deposit date:2022-08-02
Release date:2023-08-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism.
J.Am.Chem.Soc., 2023
7ZSI
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BU of 7zsi by Molmil
Structure of Orange Carotenoid Protein with canthaxanthin bound after 5 minutes of illumination
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Chukhutsina, V.U, Baxter, J.M, Fadini, A, Morgan, R.M, Pope, M.A, Maghlaoui, K, Orr, C, Wagner, A, van Thor, J.J.
Deposit date:2022-05-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Light activation of Orange Carotenoid Protein reveals bicycle-pedal single-bond isomerization.
Nat Commun, 13, 2022
7ZSH
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BU of 7zsh by Molmil
Structure of Orange Carotenoid Protein with canthaxanthin bound after 2 minutes of illumination
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Chukhutsina, V.U, Baxter, J.M, Fadini, A, Morgan, R.M, Pope, M.A, Maghlaoui, K, Orr, C, Wagner, A, van Thor, J.J.
Deposit date:2022-05-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Light activation of Orange Carotenoid Protein reveals bicycle-pedal single-bond isomerization.
Nat Commun, 13, 2022
7ZSF
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BU of 7zsf by Molmil
Structure of Orange Carotenoid Protein with canthaxanthin bound
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Chukhutsina, V.U, Baxter, J.M, Fadini, A, Morgan, R.M, Pope, M.A, Maghlaoui, K, Orr, C, Wagner, A, van Thor, J.J.
Deposit date:2022-05-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Light activation of Orange Carotenoid Protein reveals bicycle-pedal single-bond isomerization.
Nat Commun, 13, 2022
7ZSJ
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BU of 7zsj by Molmil
Structure of Orange Carotenoid Protein with canthaxanthin bound after 10 minutes of illumination
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Chukhutsina, V.U, Baxter, J.M, Fadini, A, Morgan, R.M, Pope, M.A, Maghlaoui, K, Orr, C, Wagner, A, van Thor, J.J.
Deposit date:2022-05-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Light activation of Orange Carotenoid Protein reveals bicycle-pedal single-bond isomerization.
Nat Commun, 13, 2022
7ZSG
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BU of 7zsg by Molmil
Structure of Orange Carotenoid Protein with canthaxanthin bound after 1 minute of illumination
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Chukhutsina, V.U, Baxter, J.M, Fadini, A, Morgan, R.M, Pope, M.A, Maghlaoui, K, Orr, C, Wagner, A, van Thor, J.J.
Deposit date:2022-05-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Light activation of Orange Carotenoid Protein reveals bicycle-pedal single-bond isomerization.
Nat Commun, 13, 2022
4M83
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BU of 4m83 by Molmil
Ensemble refinement of protein crystal structure (2IYF) of macrolide glycosyltransferases OleD complexed with UDP and Erythromycin A
Descriptor: ERYTHROMYCIN A, MAGNESIUM ION, Oleandomycin glycosyltransferase, ...
Authors:Wang, F, Helmich, K.E, Xu, W, Singh, S, Olmos Jr, J.L, Martinez iii, E, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-08-12
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Crystal structure of macrolide glycosyltransferases OleD
To be Published
6ND7
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BU of 6nd7 by Molmil
The crystal structure of TerB co-crystallized with polyporic acid
Descriptor: 2~3~,2~6~-dihydroxy[1~1~,2~1~:2~4~,3~1~-terphenyl]-2~2~,2~5~-dione, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Clinger, J.A, Elshahawi, S.I, Zhang, Y, Hall, R.P, Liu, Y, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2018-12-13
Release date:2019-12-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structure and Function of Terfestatin Biosynthesis Enzymes TerB and TerC
To Be Published
5EEH
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BU of 5eeh by Molmil
Crystal structure of carminomycin-4-O-methyltransferase DnrK in complex with SAH and 2-chloro-4-nitrophenol
Descriptor: 2-chloranyl-4-nitro-phenol, Carminomycin 4-O-methyltransferase DnrK, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Wang, F, Singh, S, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-10-22
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Functional AdoMet Isosteres Resistant to Classical AdoMet Degradation Pathways.
Acs Chem.Biol., 11, 2016
6D2V
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BU of 6d2v by Molmil
Apo Structure of TerB, an NADP Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway
Descriptor: CHLORIDE ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, THIOCYANATE ION, ...
Authors:Clinger, J.A, Elshahawi, S.I, Zhang, Y, Hall, R.P, Liu, Y, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2018-04-14
Release date:2018-06-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structure and Function of Terfestatin Biosynthesis Enzymes TerB and TerC
To Be Published
5EEG
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BU of 5eeg by Molmil
Crystal structure of carminomycin-4-O-methyltransferase DnrK in complex with tetrazole-SAH
Descriptor: (2~{R},3~{R},4~{S},5~{S})-2-(6-aminopurin-9-yl)-5-[[(3~{S})-3-azanyl-3-(1~{H}-1,2,3,4-tetrazol-5-yl)propyl]sulfanylmethyl]oxolane-3,4-diol, Carminomycin 4-O-methyltransferase DnrK
Authors:Wang, F, Singh, S, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-10-22
Release date:2015-12-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.255 Å)
Cite:Functional AdoMet Isosteres Resistant to Classical AdoMet Degradation Pathways.
Acs Chem.Biol., 11, 2016
4LY7
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BU of 4ly7 by Molmil
Ancestral RNase H
Descriptor: Ribonuclease H, SULFATE ION
Authors:Hart, K.M, Harms, M.J, Schmidt, B.H, Elya, C, Thornton, J.W, Marqusee, S.
Deposit date:2013-07-30
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Thermodynamic system drift in protein evolution.
Plos Biol., 12, 2014
4M60
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BU of 4m60 by Molmil
Crystal structure of macrolide glycosyltransferases OleD
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Oleandomycin glycosyltransferase, SODIUM ION
Authors:Olmos Jr, J.L, Martinez III, E, Wang, F, Helmich, K.E, Singh, S, Xu, W, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-08-08
Release date:2013-09-04
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of macrolide glycosyltransferases OleD
To be Published
6D34
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BU of 6d34 by Molmil
Apo Crystal Structure of TerC, a Terfestatin Biosynthesis Enzyme
Descriptor: ISOPROPYL ALCOHOL, TerC
Authors:Clinger, J.A, Elshahawi, S.I, Zhang, Y, Hall, R.P, Liu, Y, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2018-04-14
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Function of Terfestatin Biosynthesis Enzymes TerB and TerC
To Be Published

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