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PDB: 272 件

6W90
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De novo designed NTF2 fold protein NT-9
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, NTF2 fold protein loop-helix-loop design NT-9
著者Thompson, M.C, Pan, X, Liu, L, Fraser, J.S, Kortemme, T.
登録日2020-03-21
公開日2020-08-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Expanding the space of protein geometries by computational design of de novo fold families.
Science, 369, 2020
8FTT
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BU of 8ftt by Molmil
Crystal structure of a glycosylase specific nanobody
分子名称: Anti-NEIL1 Nanobody, SULFATE ION
著者Thompson, M.K, Prakash, A.
登録日2023-01-13
公開日2023-10-11
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Deciphering the orthorhombic crystal structure of a novel NEIL1 nanobody with pseudo-merohedral twinning.
Biorxiv, 2023
4JH8
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Crystal Structure of FosB from Bacillus cereus with Zinc and L-Cysteine-Fosfomycin Ternary Complex
分子名称: CYSTEINE, FOSFOMYCIN, GLYCEROL, ...
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
4JH2
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Crystal Structure of FosB from Bacillus cereus with Zinc and Sulfate at 1.27 A Resolution
分子名称: FORMIC ACID, MAGNESIUM ION, Metallothiol transferase FosB, ...
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
4JH3
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Crystal Structure of FosB from Bacillus cereus with Zinc and Fosfomycin
分子名称: FORMIC ACID, FOSFOMYCIN, GLYCEROL, ...
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
4JH6
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Crystal Structure of FosB from Bacillus cereus with Manganese and Fosfomycin
分子名称: FOSFOMYCIN, GLYCEROL, MAGNESIUM ION, ...
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
4JH4
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Crystal Structure of FosB from Bacillus cereus with Nickel and Fosfomycin
分子名称: FOSFOMYCIN, Metallothiol transferase FosB, NICKEL (II) ION
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
4JH5
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Crystal Structure of FosB from Bacillus cereus with Cobalt and Fosfomycin
分子名称: COBALT (II) ION, FOSFOMYCIN, MAGNESIUM ION, ...
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
4JH9
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Crystal Structure of FosB from Bacillus cereus with Maganese and Potential BSH-Fosfomycin Product
分子名称: (2R)-2-azanyl-3-[(1R,2S)-2-oxidanyl-1-phosphono-propyl]sulfanyl-propanoic acid, MANGANESE (II) ION, Metallothiol transferase FosB
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
4JH7
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BU of 4jh7 by Molmil
Crystal Structure of FosB from Bacillus cereus with Manganese and L-Cysteine-Fosfomycin Product
分子名称: (2R)-2-azanyl-3-[(1R,2S)-2-oxidanyl-1-phosphono-propyl]sulfanyl-propanoic acid, FORMIC ACID, MAGNESIUM ION, ...
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
4JH1
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Crystal Structure of FosB from Bacillus cereus with Zinc and Sulfate at 1.55 A Resolution -SAD Phasing
分子名称: GLYCEROL, MAGNESIUM ION, Metallothiol transferase FosB, ...
著者Thompson, M.K, Harp, J, Keithly, M.E, Jagessar, K, Cook, P.D, Armstrong, R.N.
登録日2013-03-04
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural and Chemical Aspects of Resistance to the Antibiotic Fosfomycin Conferred by FosB from Bacillus cereus.
Biochemistry, 52, 2013
6OB5
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Computationally-designed, modular sense/response system (S3-2D)
分子名称: Ankyrin Repeat Domain (AR), S3-2D variant, FARNESYL DIPHOSPHATE, ...
著者Thompson, M.C, Glasgow, A.A, Huang, Y.M, Fraser, J.S, Kortemme, T.
登録日2019-03-19
公開日2019-12-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.208 Å)
主引用文献Computational design of a modular protein sense-response system.
Science, 366, 2019
4TME
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BU of 4tme by Molmil
Crystal Structure of EutL from Clostridium Perfringens bound to ethanolamine
分子名称: ETHANOLAMINE, Ethanolamine utilization protein EutL, SODIUM ION
著者Thompson, M.C, Yeates, T.O.
登録日2014-06-01
公開日2015-03-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
6ARD
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BU of 6ard by Molmil
Monoclinic EutL - structure determined from merged "Group 2" data
分子名称: Ethanolamine utilization protein, SODIUM ION
著者Thompson, M.C, Cascio, D, Yeates, T.O.
登録日2017-08-22
公開日2017-10-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism.
Acta Crystallogr D Struct Biol, 74, 2018
6ARC
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BU of 6arc by Molmil
Monoclinic EutL - structure determined from merged "Group 1" data
分子名称: CHLORIDE ION, Ethanolamine utilization protein, SODIUM ION
著者Thompson, M.C, Cascio, D, Yeates, T.O.
登録日2017-08-22
公開日2017-10-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism.
Acta Crystallogr D Struct Biol, 74, 2018
4LIW
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BU of 4liw by Molmil
CcmK1 Carboxysome Shell Protein from Synechocystis PCC6803, L11K Point Mutant
分子名称: Carbon dioxide-concentrating mechanism protein CcmK homolog 1, SULFATE ION
著者Thompson, M.C, Yeates, T.O.
登録日2013-07-03
公開日2014-01-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A challenging interpretation of a hexagonally layered protein structure.
Acta Crystallogr.,Sect.D, 70, 2014
4TLH
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BU of 4tlh by Molmil
Monoclinic Crystal Structure of EutL from Clostridium Perfringens
分子名称: CHLORIDE ION, Ethanolamine utilization protein EutL, SODIUM ION
著者Thompson, M.C, Yeates, T.O.
登録日2014-05-29
公開日2015-06-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism
Acta Crystallogr.,Sect.D, 2018
4TM6
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BU of 4tm6 by Molmil
Crystal Structure of EutL from Clostridium Perfringens at 298K
分子名称: Ethanolamine utilization protein EutL, SODIUM ION
著者Thompson, M.C, Cascio, D, Yeates, T.O.
登録日2014-05-31
公開日2015-03-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9002 Å)
主引用文献An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
4U6I
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BU of 4u6i by Molmil
Crystal Structure of the EutL Microcompartment Shell Protein from Clostridium Perfringens Bound to Vitamin B12
分子名称: COBALAMIN, Ethanolamine utilization protein EutL, SODIUM ION
著者Thompson, M.C, Crowley, C.S, Kopstein, J.S, Yeates, T.O.
登録日2014-07-29
公開日2014-10-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a bacterial microcompartment shell protein bound to a cobalamin cofactor.
Acta Crystallogr.,Sect.F, 70, 2014
4EAH
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BU of 4eah by Molmil
Crystal structure of the formin homology 2 domain of FMNL3 bound to actin
分子名称: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Thompson, M.E, Heimsath, E.G, Gauvin, T.J, Higgs, H.N, Kull, F.J.
登録日2012-03-22
公開日2012-12-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献FMNL3 FH2-actin structure gives insight into formin-mediated actin nucleation and elongation.
Nat.Struct.Mol.Biol., 20, 2013
4HSX
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BU of 4hsx by Molmil
Structure of the L100F mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata with 4-bromophenol
分子名称: 4-BROMOPHENOL, Dehaloperoxidase A, GLYCEROL, ...
著者Thompson, M.K, Plummer, A, Franzen, S.
登録日2012-10-31
公開日2013-05-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Role of polarity of the distal pocket in the control of inhibitor binding in dehaloperoxidase-hemoglobin.
Biochemistry, 52, 2013
4EDI
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BU of 4edi by Molmil
Disulfide bonded EutL from Clostridium perfringens
分子名称: Ethanolamine utilization protein, SODIUM ION
著者Thompson, M.C, Cascio, D, Crowley, C.S, Kopstein, J.S, Yeates, T.O.
登録日2012-03-27
公開日2013-03-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
4FDZ
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BU of 4fdz by Molmil
EutL from Clostridium perfringens, Crystallized Under Reducing Conditions
分子名称: Ethanolamine utilization protein, SODIUM ION
著者Thompson, M.C, Cascio, D, Crowley, C.S, Kopstein, J.S, Yeates, T.O.
登録日2012-05-29
公開日2013-05-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.
Protein Sci., 24, 2015
4HSW
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BU of 4hsw by Molmil
Structure of the L100F mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata
分子名称: Dehaloperoxidase A, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Thompson, M.K, Plummer, A, Franzen, S.
登録日2012-10-31
公開日2013-05-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Role of polarity of the distal pocket in the control of inhibitor binding in dehaloperoxidase-hemoglobin.
Biochemistry, 52, 2013
4NAY
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BU of 4nay by Molmil
Crystal Structure of FosB from Staphylococcus aureus with Zn and Sulfate at 1.42 Angstrom Resolution - SAD Phasing
分子名称: Metallothiol transferase FosB, SULFATE ION, ZINC ION
著者Thompson, M.K, Goodman, M.C, Jagessar, K, Harp, J, Keithly, M.E, Cook, P.D, Armstrong, R.N.
登録日2013-10-22
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structure and Function of the Genomically Encoded Fosfomycin Resistance Enzyme, FosB, from Staphylococcus aureus.
Biochemistry, 53, 2014

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