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PDB: 314 results

5KTC
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BU of 5ktc by Molmil
FdhC with bound products: Coenzyme A and 3-[(R)-3-hydroxybutanoylamino]-3,6-dideoxy-d-galactose
Descriptor: 1,2-ETHANEDIOL, COENZYME A, FdhC, ...
Authors:Salinger, A.J, Thoden, J.B, Holden, H.M.
Deposit date:2016-07-11
Release date:2016-07-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Functional Investigation of FdhC from Acinetobacter nosocomialis: A Sugar N-Acyltransferase Belonging to the GNAT Superfamily.
Biochemistry, 55, 2016
5KTA
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BU of 5kta by Molmil
Apo FdhC- a nucleotide-linked sugar GNAT
Descriptor: DIMETHYL SULFOXIDE, FdhC, SULFATE ION
Authors:Salinger, A.J, Thoden, J.B, Holden, H.M.
Deposit date:2016-07-11
Release date:2016-07-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural and Functional Investigation of FdhC from Acinetobacter nosocomialis: A Sugar N-Acyltransferase Belonging to the GNAT Superfamily.
Biochemistry, 55, 2016
3ETJ
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BU of 3etj by Molmil
Crystal structure E. coli Purk in complex with Mg, ADP, and Pi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, HYDROGENPHOSPHATE ION, ...
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2008-10-08
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of the active site geometry of N(5)-Carboxyaminoimidazole ribonucleotide synthetase from Escherichia coli.
Biochemistry, 47, 2008
3ETH
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BU of 3eth by Molmil
Crystal structure of E. coli Purk in complex with MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Phosphoribosylaminoimidazole carboxylase ATPase subunit
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2008-10-08
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of the active site geometry of N(5)-Carboxyaminoimidazole ribonucleotide synthetase from Escherichia coli.
Biochemistry, 47, 2008
1MUS
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BU of 1mus by Molmil
crystal structure of Tn5 transposase complexed with resolved outside end DNA
Descriptor: 1,2-ETHANEDIOL, DNA non-transferred strand, DNA transferred strand, ...
Authors:Holden, H.M, Thoden, J.B, Steiniger-White, M, Reznikoff, W.S, Lovell, S, Rayment, I.
Deposit date:2002-09-24
Release date:2002-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure/function insights into Tn5 transposition.
Curr.Opin.Struct.Biol., 14, 2004
3FSB
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BU of 3fsb by Molmil
Crystal structure of QdtC, the dTDP-3-amino-3,6-dideoxy-D-glucose N-acetyl transferase from Thermoanaerobacterium thermosaccharolyticum in complex with CoA and dTDP-3-amino-quinovose
Descriptor: COENZYME A, QdtC, [(3R,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2009-01-09
Release date:2009-02-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and Functional Studies of QdtC: an N-Acetyltransferase Required for the Biosynthesis of dTDP-3-Acetamido-3,6-Dideoxy-alpha-D-Glucose.
Biochemistry, 48, 2009
3FSC
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BU of 3fsc by Molmil
Crystal structure of QdtC, the dTDP-3-amino-3,6-dideoxy-D-glucose N-acetyl transferase from Thermoanaerobacterium thermosaccharolyticum in complex with CoA and dTDP-3-amino-fucose
Descriptor: (3R,4S,5R,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphate, COENZYME A, QdtC
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2009-01-09
Release date:2009-02-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Functional Studies of QdtC: an N-Acetyltransferase Required for the Biosynthesis of dTDP-3-Acetamido-3,6-Dideoxy-alpha-D-Glucose.
Biochemistry, 48, 2009
3FS8
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BU of 3fs8 by Molmil
Crystal structure of QdtC, the dTDP-3-amino-3,6-dideoxy-D-glucose N-acetyl transferase from Thermoanaerobacterium thermosaccharolyticum in complex with Acetyl-CoA
Descriptor: ACETYL COENZYME *A, QdtC, THYMINE
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2009-01-09
Release date:2009-02-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Studies of QdtC: an N-Acetyltransferase Required for the Biosynthesis of dTDP-3-Acetamido-3,6-Dideoxy-alpha-D-Glucose.
Biochemistry, 48, 2009
2PA7
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BU of 2pa7 by Molmil
Structure of Wild-Type dTDP-4-keto-6-deoxy-D-glucose-3,4-ketoisomerase from Aneurinibacillus thermoaerophilus in complex with TDP
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DTDP-6-deoxy-3,4-keto-hexulose isomerase, ...
Authors:Davis, M.L, Thoden, J.B, Holden, H.M.
Deposit date:2007-03-27
Release date:2007-04-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The X-ray Structure of dTDP-4-Keto-6-deoxy-D-glucose-3,4-ketoisomerase.
J.Biol.Chem., 282, 2007
2PAK
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BU of 2pak by Molmil
Structure of a H51N mutant dTDP-4-keto-6-deoxy-D-glucose-3,4-ketoisomerase from Aneurinibacillus thermoaerophilus complexed with TDP
Descriptor: DTDP-6-deoxy-3,4-keto-hexulose isomerase, THYMIDINE-5'-DIPHOSPHATE
Authors:Davis, M.L, Thoden, J.B, Holden, H.M.
Deposit date:2007-03-27
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The X-ray Structure of dTDP-4-Keto-6-deoxy-D-glucose-3,4-ketoisomerase.
J.Biol.Chem., 282, 2007
2PA4
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BU of 2pa4 by Molmil
Crystal structure of UDP-glucose pyrophosphorylase from Corynebacteria glutamicum in complex with magnesium and UDP-glucose
Descriptor: MAGNESIUM ION, URIDINE-5'-DIPHOSPHATE-GLUCOSE, UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
Authors:Holden, H.M, Thoden, J.B.
Deposit date:2007-03-27
Release date:2007-04-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Active site geometry of glucose-1-phosphate uridylyltransferase.
Protein Sci., 16, 2007
2PAE
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BU of 2pae by Molmil
Structure of a H49N mutant dTDP-4-keto-6-deoxy-D-glucose-3,4-ketoisomerase from Aneurinibacillus thermoaerophilus in complex with TDP
Descriptor: DTDP-6-deoxy-3,4-keto-hexulose isomerase, THYMIDINE-5'-DIPHOSPHATE
Authors:Davis, M.L, Thoden, J.B, Holden, H.M.
Deposit date:2007-03-27
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The X-ray Structure of dTDP-4-Keto-6-deoxy-D-glucose-3,4-ketoisomerase.
J.Biol.Chem., 282, 2007
2PAM
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BU of 2pam by Molmil
Structure of a H49N, H51N double mutant dTDP-4-keto-6-deoxy-D-glucose-3,4-ketoisomerase from Aneurinibacillus thermoaerophilus complexed with TDP
Descriptor: DTDP-6-deoxy-3,4-keto-hexulose isomerase, THYMIDINE-5'-DIPHOSPHATE
Authors:Davis, M.L, Thoden, J.B, Holden, H.M.
Deposit date:2007-03-27
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The X-ray Structure of dTDP-4-Keto-6-deoxy-D-glucose-3,4-ketoisomerase.
J.Biol.Chem., 282, 2007
7L82
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BU of 7l82 by Molmil
x-ray structure of the psychrobacter cryohalolentis Pcryo_0637 N-acetyltransferase in the presene of its reaction tetrahedral intermediate
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Putative acetyl transferase protein, ...
Authors:Linehan, M.P, Thoden, J.B, Holden, H.M.
Deposit date:2020-12-30
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Characterization of two enzymes from Psychrobacter cryohalolentis that are required for the biosynthesis of an unusual diacetamido-d-sugar.
J.Biol.Chem., 296, 2021
7L7Y
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BU of 7l7y by Molmil
x-ray structure of the N-acetyltransferase Pcryo_0637 from psychrobacter cryohalolentis in the presence of UDP and acetyl-conezyme A
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETYL COENZYME *A, CHLORIDE ION, ...
Authors:Linehan, M.P, Thoden, J.B, Holden, H.M.
Deposit date:2020-12-30
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Characterization of two enzymes from Psychrobacter cryohalolentis that are required for the biosynthesis of an unusual diacetamido-d-sugar.
J.Biol.Chem., 296, 2021
7L7Z
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BU of 7l7z by Molmil
x-ray structure of the N-acetyltransferase Pcryo_0637 from psychrobacter cryohalolentis in the presence of coenzyme A and UDP-di-N-acetyl-bacillosamine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, COENZYME A, ...
Authors:Linehan, M.P, Thoden, J.B, Holden, H.M.
Deposit date:2020-12-30
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Characterization of two enzymes from Psychrobacter cryohalolentis that are required for the biosynthesis of an unusual diacetamido-d-sugar.
J.Biol.Chem., 296, 2021
7L81
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BU of 7l81 by Molmil
x-ray structure of the psychrobacter cryohalolentis N-acetyltransferase Pcryo_0637 in the presence of coenzyme A and
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, COENZYME A, ...
Authors:Linehan, M.P, Thoden, J.B, Holden, H.M.
Deposit date:2020-12-30
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Characterization of two enzymes from Psychrobacter cryohalolentis that are required for the biosynthesis of an unusual diacetamido-d-sugar.
J.Biol.Chem., 296, 2021
7L7X
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BU of 7l7x by Molmil
X-ray structure of the Pcryo_0638 aminotransferase from Psychrobacter cryohalolentis
Descriptor: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, DegT/DnrJ/EryC1/StrS aminotransferase, ...
Authors:Linehan, M.P, Thoden, J.B, Holden, H.M.
Deposit date:2020-12-30
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Characterization of two enzymes from Psychrobacter cryohalolentis that are required for the biosynthesis of an unusual diacetamido-d-sugar.
J.Biol.Chem., 296, 2021
7MFO
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BU of 7mfo by Molmil
X-ray structure of the L136 Aminotransferase from Acanthamoeba polyphaga mimivirus in the presence of TDP and PMP
Descriptor: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, CHLORIDE ION, ...
Authors:Ferek, J.D, Thoden, J.B, Holden, H.M.
Deposit date:2021-04-10
Release date:2021-04-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Characterization of an aminotransferase from Acanthamoeba polyphaga Mimivirus.
Protein Sci., 30, 2021
7MFP
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BU of 7mfp by Molmil
crystal structure of the L136 aminotransferase K185A from acanthamoeba polyphaga mimivirus in the presence of the UDP-viosamine external aldimine
Descriptor: (2R,3R,4S,5S,6R)-3,4-dihydroxy-5-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]-6-methyloxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name), 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Seltzner, C.A, Thoden, J.B, Holden, H.M.
Deposit date:2021-04-10
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Characterization of an aminotransferase from Acanthamoeba polyphaga Mimivirus.
Protein Sci., 30, 2021
7MFQ
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BU of 7mfq by Molmil
crystal structure of the L136 aminotransferase from acanthamoeba polyphaga mimivirus in complex with the TDP-viosamine external aldimine
Descriptor: (2R,3R,4S,5S,6R)-3,4-DIHYDROXY-5-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)IMINO]-6-METHYLTETRAHYDRO-2H-PYRAN-2-YL [(2R,3S,5R)-3-HYDROXY-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)TETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Seltzner, C.A, Thoden, J.B, Holden, H.M.
Deposit date:2021-04-10
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Characterization of an aminotransferase from Acanthamoeba polyphaga Mimivirus.
Protein Sci., 30, 2021
7M15
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BU of 7m15 by Molmil
crystal structure of cj1430 in the presence of GDP-D-glycero-L-gluco-heptose, a GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from campylobacter jejuni
Descriptor: 1,2-ETHANEDIOL, GDP-D-glycero-L-gluco-heptose, [(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4R,5R,6S)-6-[(1R)-1,2-dihydroxyethyl]-3,4,5-trihydroxyoxan-2-yl dihydrogen diphosphate (non-preferred name)
Authors:Girardi, N.M, Thoden, J.B, Raushel, F.M, Holden, H.M.
Deposit date:2021-03-12
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
7M14
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BU of 7m14 by Molmil
x-ray structure of cj1430 in the presence of GDP, a GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from campylobacter jejuni
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, SODIUM ION, ...
Authors:Girardi, N.M, Thoden, J.B, Raushel, F.M, Holden, H.M.
Deposit date:2021-03-12
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
7M13
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BU of 7m13 by Molmil
Crystal structure of CJ1428, a GDP-D-GLYCERO-L-GLUCO-HEPTOSE SYNTHASE from campylobacter jejuni in the presence of NADPH
Descriptor: 1,2-ETHANEDIOL, GDP-L-fucose synthase, MAGNESIUM ION, ...
Authors:Anderson, T.K, Thoden, J.B, Raushel, F.M, Holden, H.M.
Deposit date:2021-03-12
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
Biochemistry, 60, 2021
4MZU
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BU of 4mzu by Molmil
Crystal structure of FdtD, a bifunctional ketoisomerase/N-acetyltransferase from Shewanella denitrificans
Descriptor: COENZYME A, MAGNESIUM ION, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Chantigian, D.P, Thoden, J.B, Holden, H.M.
Deposit date:2013-09-30
Release date:2013-10-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Biochemical Characterization of a Bifunctional Ketoisomerase/N-Acetyltransferase from Shewanella denitrificans.
Biochemistry, 52, 2013

222624

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