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PDB: 437 results

7SNH
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BU of 7snh by Molmil
Structure of G6PD-D200N tetramer bound to NADP+
Descriptor: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wei, X, Marmorstein, R.
Deposit date:2021-10-28
Release date:2022-07-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Allosteric role of a structural NADP + molecule in glucose-6-phosphate dehydrogenase activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
7SNF
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BU of 7snf by Molmil
Structure of G6PD-WT dimer
Descriptor: Glucose-6-phosphate 1-dehydrogenase
Authors:Wei, X, Marmorstein, R.
Deposit date:2021-10-28
Release date:2022-07-13
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Allosteric role of a structural NADP + molecule in glucose-6-phosphate dehydrogenase activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
8F23
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BU of 8f23 by Molmil
The crystal structure of a rationally designed zinc sensor based on maltose binding protein - Apo conformation
Descriptor: Zinc Sensor protein
Authors:Zhao, Z, Zhou, M, Zemerov, S.d, Marmorstein, R, Dmochowski, I.J.
Deposit date:2022-11-06
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Rational design of a genetically encoded NMR zinc sensor.
Chem Sci, 14, 2023
8ETB
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BU of 8etb by Molmil
the crystal structure of a rationally designed zinc sensor based on maltose binding protein - Zn binding conformation
Descriptor: ACETATE ION, ZINC ION, Zinc Sensor protein
Authors:Zhao, Z, Zhou, M, Zemerov, S.D, Marmorstein, R, Dmochowski, I.J.
Deposit date:2022-10-16
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Rational design of a genetically encoded NMR zinc sensor.
Chem Sci, 14, 2023
1A4U
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BU of 1a4u by Molmil
ALCOHOL DEHYDROGENASE FROM DROSOPHILA LEBANONENSIS
Descriptor: ALCOHOL DEHYDROGENASE
Authors:Benach, J, Atrian, S, Gonzalez-Duarte, R, Ladenstein, R.
Deposit date:1998-02-05
Release date:1999-02-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The refined crystal structure of Drosophila lebanonensis alcohol dehydrogenase at 1.9 A resolution.
J.Mol.Biol., 282, 1998
3SB2
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BU of 3sb2 by Molmil
Crystal Structure of the RNA chaperone Hfq from Herbaspirillum seropedicae SMR1
Descriptor: GLYCEROL, Protein hfq
Authors:Kadowaki, M.A.S, Iulek, J, Barbosa, J.A.R.G, Pedrosa, F.O, Souza, E.M, Chubatsu, L.S, Monteiro, R.A, Steffens, M.B.R.
Deposit date:2011-06-03
Release date:2012-01-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6301 Å)
Cite:Structural characterization of the RNA chaperone Hfq from the nitrogen-fixing bacterium Herbaspirillum seropedicae SmR1.
Biochim.Biophys.Acta, 1824, 2011
1RGD
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BU of 1rgd by Molmil
STRUCTURE REFINEMENT OF THE GLUCOCORTICOID RECEPTOR-DNA BINDING DOMAIN FROM NMR DATA BY RELAXATION MATRIX CALCULATIONS
Descriptor: GLUCOCORTICOID RECEPTOR, ZINC ION
Authors:Van Tilborg, M.A.A, Bonvin, A.M.J.J, Hard, K, Davis, A, Maler, B, Boelens, R, Yamamoto, K.R, Kaptein, R.
Deposit date:1995-01-06
Release date:1995-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure refinement of the glucocorticoid receptor-DNA binding domain from NMR data by relaxation matrix calculations.
J.Mol.Biol., 247, 1995
4F2B
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BU of 4f2b by Molmil
Modulation of S.Aureus Phosphatidylinositol-Specific Phospholipase C Membrane Binding
Descriptor: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1-phosphatidylinositol phosphodiesterase
Authors:Cheng, J, Goldstein, R, Stec, B, Gershenson, A, Roberts, M.F.
Deposit date:2012-05-07
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Competition between Anion Binding and Dimerization Modulates Staphylococcus aureus Phosphatidylinositol-specific Phospholipase C Enzymatic Activity.
J.Biol.Chem., 287, 2012
1RVV
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BU of 1rvv by Molmil
SYNTHASE/RIBOFLAVIN SYNTHASE COMPLEX OF BACILLUS SUBTILIS
Descriptor: 5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE, PHOSPHATE ION, RIBOFLAVIN SYNTHASE
Authors:Ritsert, K, Huber, R, Turk, D, Ladenstein, R, Schmidt-Baese, K, Bacher, A.
Deposit date:1995-10-25
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Studies on the lumazine synthase/riboflavin synthase complex of Bacillus subtilis: crystal structure analysis of reconstituted, icosahedral beta-subunit capsids with bound substrate analogue inhibitor at 2.4 A resolution.
J.Mol.Biol., 253, 1995
3TOB
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BU of 3tob by Molmil
Human MOF E350Q crystal structure with active site lysine partially acetylated
Descriptor: CHLORIDE ION, ZINC ION, histone acetyltransferase MYST1
Authors:Yuan, H, Ding, E.C, Marmorstein, R.
Deposit date:2011-09-04
Release date:2011-11-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:MYST protein acetyltransferase activity requires active site lysine autoacetylation.
Embo J., 31, 2011
1AOZ
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BU of 1aoz by Molmil
REFINED CRYSTAL STRUCTURE OF ASCORBATE OXIDASE AT 1.9 ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ASCORBATE OXIDASE, COPPER (II) ION, ...
Authors:Messerschmidt, A, Ladenstein, R, Huber, R.
Deposit date:1992-01-08
Release date:1993-10-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Refined crystal structure of ascorbate oxidase at 1.9 A resolution.
J.Mol.Biol., 224, 1992
1B16
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BU of 1b16 by Molmil
ALCOHOL DEHYDROGENASE FROM DROSOPHILA LEBANONENSIS TERNARY COMPLEX WITH NAD-3-PENTANONE
Descriptor: NICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT, PROTEIN (ALCOHOL DEHYDROGENASE)
Authors:Benach, J, Atrian, S, Gonzalez-Duarte, R, Ladenstein, R.
Deposit date:1998-11-25
Release date:1999-11-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The catalytic reaction and inhibition mechanism of Drosophila alcohol dehydrogenase: observation of an enzyme-bound NAD-ketone adduct at 1.4 A resolution by X-ray crystallography.
J.Mol.Biol., 289, 1999
2AQ0
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BU of 2aq0 by Molmil
Solution structure of the human homodimeric dna repair protein XPF
Descriptor: DNA repair endonuclease XPF
Authors:Das, D, Tripsianes, K, Folkers, G, Jaspers, N.G, Hoeijmakers, J.H, Kaptein, R, Boelens, R.
Deposit date:2005-08-17
Release date:2006-10-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The HhH domain of the human DNA repair protein XPF forms stable homodimers
Proteins, 70, 2008
1O9K
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BU of 1o9k by Molmil
Crystal structure of the retinoblastoma tumour suppressor protein bound to E2F peptide
Descriptor: RETINOBLASTOMA-ASSOCIATED PROTEIN, TRANSCRIPTION FACTOR E2F1
Authors:Xiao, B, Spencer, J, Clements, A, Ali-Khan, N, Mittnacht, S, Broceno, C, Burghammer, M, Perrakis, A, Marmorstein, R, Gamblin, S.J.
Deposit date:2002-12-16
Release date:2003-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Retinoblastoma Tumor Suppressor Protein Bound to E2F and the Molecular Basis of its Regulation
Proc.Natl.Acad.Sci.USA, 100, 2003
1B15
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BU of 1b15 by Molmil
ALCOHOL DEHYDROGENASE FROM DROSOPHILA LEBANONENSIS TERNARY COMPLEX WITH NAD-ACETONE
Descriptor: ALCOHOL DEHYDROGENASE, NICOTINAMIDE ADENINE DINUCLEOTIDE ACETONE ADDUCT
Authors:Benach, J, Atrian, S, Gonzalez-Duarte, R, Ladenstein, R.
Deposit date:1998-11-25
Release date:1999-11-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The catalytic reaction and inhibition mechanism of Drosophila alcohol dehydrogenase: observation of an enzyme-bound NAD-ketone adduct at 1.4 A resolution by X-ray crystallography.
J.Mol.Biol., 289, 1999
7TOE
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BU of 7toe by Molmil
Structure of G6PD-WT tetramer with no symmetry imposed
Descriptor: Glucose-6-phosphate 1-dehydrogenase
Authors:Wei, X, Marmorstein, R.
Deposit date:2022-01-24
Release date:2022-09-14
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Allosteric role of a structural NADP + molecule in glucose-6-phosphate dehydrogenase activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TOF
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BU of 7tof by Molmil
Structure of G6PD-WT dimer with no symmetry applied
Descriptor: Glucose-6-phosphate 1-dehydrogenase
Authors:Wei, X, Marmorstein, R.
Deposit date:2022-01-24
Release date:2022-09-14
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Allosteric role of a structural NADP + molecule in glucose-6-phosphate dehydrogenase activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
2ER8
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BU of 2er8 by Molmil
Crystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplex
Descriptor: 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*G)-3', Regulatory protein LEU3, ZINC ION
Authors:Fitzgerald, M.X, Marmorstein, R.
Deposit date:2005-10-24
Release date:2006-04-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure of a Leu3-DNA complex: recognition of everted CGG half-sites by a Zn2Cys6 binuclear cluster protein.
Structure, 14, 2006
3TO9
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BU of 3to9 by Molmil
Crystal structure of yeast Esa1 E338Q HAT domain bound to coenzyme A with active site lysine acetylated
Descriptor: 1,2-ETHANEDIOL, CACODYLIC ACID, COENZYME A, ...
Authors:Yuan, H, Ding, E.C, Marmorstein, R.
Deposit date:2011-09-04
Release date:2011-11-09
Last modified:2012-01-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:MYST protein acetyltransferase activity requires active site lysine autoacetylation.
Embo J., 31, 2011
1JUH
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BU of 1juh by Molmil
Crystal Structure of Quercetin 2,3-dioxygenase
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fusetti, F, Schroeter, K.H, Steiner, R.A, Dijkstra, B.W.
Deposit date:2001-08-24
Release date:2002-05-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the copper-containing quercetin 2,3-dioxygenase from Aspergillus japonicus.
Structure, 10, 2002
3BY4
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BU of 3by4 by Molmil
Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin
Descriptor: 3-AMINOPROPANE, Ubiquitin, Ubiquitin thioesterase OTU1
Authors:Messick, T.E, Marmorstein, R.
Deposit date:2008-01-15
Release date:2008-02-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein
J.Biol.Chem., 283, 2008
1LEA
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BU of 1lea by Molmil
SOLUTION STRUCTURE OF THE LEXA REPRESSOR DNA BINDING DETERMINED BY 1H NMR SPECTROSCOPY
Descriptor: LEXA REPRESSOR DNA BINDING DOMAIN
Authors:Fogh, R.H, Ottleben, G, Rueterjans, H, Schnarr, M, Boelens, R, Kaptein, R.
Deposit date:1994-05-11
Release date:1994-08-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the LexA repressor DNA binding domain determined by 1H NMR spectroscopy.
EMBO J., 13, 1994
3C0R
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BU of 3c0r by Molmil
Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin
Descriptor: 3-AMINOPROPANE, Ubiquitin, Ubiquitin thioesterase OTU1
Authors:Messick, T.E, Marmorstein, R.
Deposit date:2008-01-21
Release date:2008-02-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.315 Å)
Cite:Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein
J.Biol.Chem., 283, 2008
1B2L
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BU of 1b2l by Molmil
ALCOHOL DEHYDROGENASE FROM DROSOPHILA LEBANONENSIS: TERNARY COMPLEX WITH NAD-CYCLOHEXANONE
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ALCOHOL DEHYDROGENASE, CALCIUM ION, ...
Authors:Benach, J, Atrian, S, Gonzalez-Duarte, R, Ladenstein, R.
Deposit date:1998-11-26
Release date:1999-11-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The catalytic reaction and inhibition mechanism of Drosophila alcohol dehydrogenase: observation of an enzyme-bound NAD-ketone adduct at 1.4 A resolution by X-ray crystallography.
J.Mol.Biol., 289, 1999
1HQK
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BU of 1hqk by Molmil
CRYSTAL STRUCTURE ANALYSIS OF LUMAZINE SYNTHASE FROM AQUIFEX AEOLICUS
Descriptor: 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE
Authors:Zhang, X, Meining, W, Fischer, M, Bacher, A, Ladenstein, R.
Deposit date:2000-12-18
Release date:2001-12-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray structure analysis and crystallographic refinement of lumazine synthase from the hyperthermophile Aquifex aeolicus at 1.6 A resolution: determinants of thermostability revealed from structural comparisons.
J.Mol.Biol., 306, 2001

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