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PDB: 409 件

1UI7
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Site-directed mutagenesis of His433 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
登録日2003-07-15
公開日2004-04-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
1UI8
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Site-directed mutagenesis of His592 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
登録日2003-07-15
公開日2004-04-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
1WXR
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Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli
分子名称: haemoglobin protease
著者Otto, B.R, Sijbrandi, R, Luirink, J, Oudega, B, Heddle, J.G, Mizutani, K, Park, S.-Y, Tame, J.R.H.
登録日2005-01-31
公開日2005-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of heme binding protein, an autotransporter hemoglobin protease from pathogenic escherichia coli
J.Biol.Chem., 280, 2005
1VD6
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Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
分子名称: GLYCEROL, Glycerophosphoryl Diester Phosphodiesterase
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-18
公開日2005-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
To be Published
2ZFH
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Crystal structure of putative CutA1 from Homo sapiens at 2.05A resolution
分子名称: CutA
著者Bagautdinov, B, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-01-07
公開日2008-01-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of putative CutA1 from Homo sapiens determined at 2.05 A resolution.
Acta Crystallogr.,Sect.F, 64, 2008
1WN1
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Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
分子名称: COBALT (II) ION, dipeptidase
著者Jeyakanthan, J, Taka, J, Kitaguchi, Y, Shiro, Y, Yokoyama, S, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-26
公開日2005-08-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
To be Published
1V9K
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The crystal structure of the catalytic domain of pseudouridine synthase RluC from Escherichia coli
分子名称: Ribosomal large subunit pseudouridine synthase C, SULFATE ION
著者Machida, Y, Mizutani, K, Unzai, S, Park, S.-Y, Tame, J.R.H.
登録日2004-01-26
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli
Biochemistry, 43, 2004
1V4P
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Crystal structure of Alanyl-tRNA Synthetase from Pyrococcus horikoshii OT3
分子名称: ZINC ION, alanyl-tRNA synthetase
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-14
公開日2004-11-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of alanyl-tRNA synthetase editing-domain homolog (PH0574) from a hyperthermophile, Pyrococcus horikoshii OT3 at 1.45 A resolution
Proteins, 62, 2006
1VC2
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Crystal structure of Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
分子名称: Glyceraldehyde 3-Phosphate Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-04
公開日2004-03-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
To be Published
2ZQ9
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Cephalothin acyl-intermediate structure of class a beta-lactamase Toho-1 E166A/R274N/R276N triple mutant
分子名称: 5-METHYLENE-2-[2-OXO-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-ETHYL]-5,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, Beta-lactamase Toho-1, CEPHALOTHIN, ...
著者Nitanai, Y, Shimamura, T, Uchiyama, T, Ishii, Y, Takehira, M, Yutani, K, Matsuzawa, H, Miyano, M.
登録日2008-08-07
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Structural Basis of Extend Spectrum Beta-Lactamase in Correlation of Enzymatic Kinetics and Thermal Stability of Acyl-Intermediates
To be Published
3A1M
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A fusion protein of a beta helix region of gene product 5 and the foldon region of bacteriophage T4
分子名称: POTASSIUM ION, chimera of thrombin cleavage site, Tail-associated lysozyme, ...
著者Yokoi, N, Suzuki, A, Hikage, T, Koshiyama, T, Terauchi, M, Yutani, K, Kanamaru, S, Arisaka, F, Yamane, T, Watanabe, Y, Ueno, T.
登録日2009-04-11
公開日2010-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Construction of Robust Bio-nanotubes using the Controlled Self-Assembly of Component Proteins of Bacteriophage T4
Small, 6, 2010
1JJU
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Structure of a Quinohemoprotein Amine Dehydrogenase with a Unique Redox Cofactor and Highly Unusual Crosslinking
分子名称: PROTOPORPHYRIN IX CONTAINING FE, QUINOHEMOPROTEIN AMINE DEHYDROGENASE, SODIUM ION, ...
著者Datta, S, Mori, Y, Takagi, K, Kawaguchi, K, Chen, Z.-W, Kano, K, Ikeda, T, Okajima, T, Kuroda, S, Tanizawa, K, Mathews, F.S.
登録日2001-07-09
公開日2001-12-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of a quinohemoprotein amine dehydrogenase with an uncommon redox cofactor and highly unusual crosslinking.
Proc.Natl.Acad.Sci.USA, 98, 2001
2E2V
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Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with benzylhydrazine
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
登録日2006-11-17
公開日2007-11-20
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2CWU
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BU of 2cwu by Molmil
Substrate schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
登録日2005-06-26
公開日2006-05-02
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWT
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Catalytic base deletion in copper amine oxidase from arthrobacter globiformis
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
登録日2005-06-26
公開日2006-05-02
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2ELG
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BU of 2elg by Molmil
The rare crystallographic structure of d(CGCGCG)2: The natural spermidine molecule bound to the minor groove of left-handed Z-DNA d(CGCGCG)2 at 10 degree celsius
分子名称: DNA (5'-D(*DCP*DGP*DCP*DGP*DCP*DG)-3'), MAGNESIUM ION, SODIUM ION, ...
著者Ohishi, H, Tozuka, Y, Zhou, D.Y, Ishida, T, Nakatani, K.
登録日2007-03-27
公開日2008-04-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献The rare crystallographic structure of d(CGCGCG)(2): The natural spermidine molecule bound to the minor groove of left-handed Z-DNA d(CGCGCG)(2) at 10 degrees C
Biochem.Biophys.Res.Commun., 358, 2007
2E2T
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Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with phenylhydrazine
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
登録日2006-11-17
公開日2007-11-20
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2E2U
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Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with 4-hydroxybenzylhydrazine
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
登録日2006-11-17
公開日2007-11-20
最終更新日2013-04-24
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2D1W
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Substrate Schiff-Base intermediate with tyramine in copper amine oxidase from Arthrobacter globiformis
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Murakawa, T, Okajima, T, Kuroda, S, Nakamoto, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
登録日2005-09-01
公開日2006-05-02
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Quantum mechanical hydrogen tunneling in bacterial copper amine oxidase reaction
Biochem.Biophys.Res.Commun., 342, 2006
2CWV
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Product schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
分子名称: COPPER (II) ION, Phenylethylamine oxidase
著者Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
登録日2005-06-26
公開日2006-05-02
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2E66
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Crystal Structure Of CutA1 From Pyrococcus Horikoshii OT3, Mutation D60A
分子名称: CHLORIDE ION, Divalent-cation tolerance protein cutA, SODIUM ION
著者Bagautdinov, B, Sawano, M, Bagautdinova, S, Yutani, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-25
公開日2007-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the hyper-thermostability of CutA1
To be Published
2HOW
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Dipeptidase (PH0974) from Pyrococcus horikoshii OT3
分子名称: 356aa long hypothetical dipeptidase
著者Jeyakanthan, J, Yokoyama, S, Shiro, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-07-17
公開日2007-09-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dipeptidase (PH0974) from Pyrococcus Horikoshii Ot3
To be Published
1G3B
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BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASE MAGNESIUM(II) CHELATE
分子名称: 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3D
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BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASE COPPER (II) CHELATE
分子名称: 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3C
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BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF BASE IRON(III) CHELATE
分子名称: 2-(4-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001

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